RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 IARSP41252 1262 aaKnown RBP19.45■□□□□ 0.7
SAMM50-201ENST00000350028 RCAN1P53805 252 aa19.45■□□□□ 0.7
SAMM50-201ENST00000350028 NTRK3Q16288 839 aa19.45■□□□□ 0.7
SAMM50-201ENST00000350028 OTUD7BQ6GQQ9 843 aa19.45■□□□□ 0.7
SAMM50-201ENST00000350028 SDR42E1Q8WUS8 393 aa19.45■□□□□ 0.7
SAMM50-201ENST00000350028 STK36Q9NRP7 1315 aa19.45■□□□□ 0.7
SAMM50-201ENST00000350028 IRS2Q9Y4H2 1338 aa19.45■□□□□ 0.7
SAMM50-201ENST00000350028 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.44■□□□□ 0.7
SAMM50-201ENST00000350028 MINDY4BA8MYZ0 360 aa19.44■□□□□ 0.7
SAMM50-201ENST00000350028 PCP11498 1178 aaKnown RBP19.44■□□□□ 0.7
SAMM50-201ENST00000350028 HMGB2P26583 209 aaKnown RBP19.44■□□□□ 0.7
SAMM50-201ENST00000350028 DYNLL1P63167 89 aaKnown RBP19.44■□□□□ 0.7
SAMM50-201ENST00000350028 SPTY2D1Q68D10 685 aaPredicted RBP19.44■□□□□ 0.7
SAMM50-201ENST00000350028 PROM2Q8N271 834 aa19.44■□□□□ 0.7
SAMM50-201ENST00000350028 ESR2Q92731 530 aa19.44■□□□□ 0.7
SAMM50-201ENST00000350028 FAM217BQ9NTX9 383 aaPredicted RBP19.44■□□□□ 0.7
SAMM50-201ENST00000350028 UBR3Q6ZT12 1888 aa19.44■□□□□ 0.7
SAMM50-201ENST00000350028 NR1I2O75469 434 aa19.43■□□□□ 0.7
SAMM50-201ENST00000350028 YEATS4O95619 227 aa19.43■□□□□ 0.7
SAMM50-201ENST00000350028 KIF23Q02241 960 aaPredicted RBP19.43■□□□□ 0.7
SAMM50-201ENST00000350028 MECOMQ03112 1051 aa19.43■□□□□ 0.7
SAMM50-201ENST00000350028 ZSCAN30Q86W11 494 aa19.43■□□□□ 0.7
SAMM50-201ENST00000350028 CCAR1Q8IX12 1150 aaKnown RBP19.43■□□□□ 0.7
SAMM50-201ENST00000350028 ZNF384Q8TF68 577 aa19.43■□□□□ 0.7
SAMM50-201ENST00000350028 MAST2Q6P0Q8 1798 aa19.43■□□□□ 0.7
SAMM50-201ENST00000350028 IFNAR1P17181 557 aa19.42■□□□□ 0.7
SAMM50-201ENST00000350028 RXRAP19793 462 aa19.42■□□□□ 0.7
SAMM50-201ENST00000350028 SSRP1Q08945 709 aaKnown RBP19.42■□□□□ 0.7
SAMM50-201ENST00000350028 CAMK4Q16566 473 aa19.42■□□□□ 0.7
SAMM50-201ENST00000350028 MYSM1Q5VVJ2 828 aa19.42■□□□□ 0.7
SAMM50-201ENST00000350028 WASF1Q92558 559 aa19.42■□□□□ 0.7
SAMM50-201ENST00000350028 FTOQ9C0B1 505 aaKnown RBP eCLIP19.42■□□□□ 0.7
SAMM50-201ENST00000350028 POLR3EQ9NVU0 708 aa19.42■□□□□ 0.7
SAMM50-201ENST00000350028 CTAGE5O15320 804 aa19.42■□□□□ 0.7
SAMM50-201ENST00000350028 CHAF1AQ13111 956 aaPredicted RBP19.42■□□□□ 0.7
SAMM50-201ENST00000350028 PRR5LQ6MZQ0 368 aa19.42■□□□□ 0.7
SAMM50-201ENST00000350028 CCDC73Q6ZRK6 1079 aa19.42■□□□□ 0.7
SAMM50-201ENST00000350028 UBAC1Q9BSL1 405 aa19.42■□□□□ 0.7
SAMM50-201ENST00000350028 CRNKL1Q9BZJ0 848 aaKnown RBP19.42■□□□□ 0.7
SAMM50-201ENST00000350028 CCDC39Q9UFE4 941 aa19.42■□□□□ 0.7
SAMM50-201ENST00000350028 CCDC88AQ3V6T2 1871 aa19.42■□□□□ 0.7
SAMM50-201ENST00000350028 XDHP47989 1333 aa19.41■□□□□ 0.7
SAMM50-201ENST00000350028 CCDC196A0A1B0GTZ2 297 aa19.41■□□□□ 0.7
SAMM50-201ENST00000350028 FMNL1O95466 1100 aaPredicted RBP19.41■□□□□ 0.7
SAMM50-201ENST00000350028 GYS1P13807 737 aa19.41■□□□□ 0.7
SAMM50-201ENST00000350028 TYRO3Q06418 890 aa19.41■□□□□ 0.7
SAMM50-201ENST00000350028 TRIM29Q14134 588 aa19.41■□□□□ 0.7
SAMM50-201ENST00000350028 KRT40Q6A162 431 aa19.41■□□□□ 0.7
SAMM50-201ENST00000350028 C15orf52Q6ZUT6 534 aaKnown RBP19.41■□□□□ 0.7
SAMM50-201ENST00000350028 LINC00301Q8NCQ3 95 aa19.41■□□□□ 0.7
SAMM50-201ENST00000350028 KCNG4Q8TDN1 519 aa19.41■□□□□ 0.7
SAMM50-201ENST00000350028 ANKIB1Q9P2G1 1089 aa19.41■□□□□ 0.7
SAMM50-201ENST00000350028 A0A1W2PQ27 194 aa19.4■□□□□ 0.7
SAMM50-201ENST00000350028 A0A1W2PQ64 194 aa19.4■□□□□ 0.7
SAMM50-201ENST00000350028 A0A1W2PQD8 194 aa19.4■□□□□ 0.7
SAMM50-201ENST00000350028 POLR3DP05423 398 aaPredicted RBP19.4■□□□□ 0.7
SAMM50-201ENST00000350028 FGRP09769 529 aa19.4■□□□□ 0.7
SAMM50-201ENST00000350028 ME1P48163 572 aa19.4■□□□□ 0.7
SAMM50-201ENST00000350028 ST5P78524 1137 aa19.4■□□□□ 0.7
SAMM50-201ENST00000350028 PPP2R5BQ15173 497 aa19.4■□□□□ 0.7
SAMM50-201ENST00000350028 STK38Q15208 465 aa19.4■□□□□ 0.7
SAMM50-201ENST00000350028 RTN1Q16799 776 aa19.4■□□□□ 0.7
SAMM50-201ENST00000350028 ADALQ6DHV7 355 aa19.4■□□□□ 0.7
SAMM50-201ENST00000350028 CCDC144CPQ8IYA2 1237 aa19.4■□□□□ 0.7
SAMM50-201ENST00000350028 WDR66Q8TBY9 1149 aa19.4■□□□□ 0.7
SAMM50-201ENST00000350028 RPGRQ92834 1020 aaKnown RBP19.4■□□□□ 0.7
SAMM50-201ENST00000350028 PHKBQ93100 1093 aa19.4■□□□□ 0.7
SAMM50-201ENST00000350028 MYL10Q9BUA6 226 aa19.4■□□□□ 0.7
SAMM50-201ENST00000350028 RANBP6O60518 1105 aaKnown RBP19.39■□□□□ 0.7
SAMM50-201ENST00000350028 SASS6Q6UVJ0 657 aa19.39■□□□□ 0.7
SAMM50-201ENST00000350028 TXNRD3Q86VQ6 643 aa19.39■□□□□ 0.7
SAMM50-201ENST00000350028 ZKSCAN3Q9BRR0 538 aa19.39■□□□□ 0.7
SAMM50-201ENST00000350028 ATP8A2Q9NTI2 1148 aa19.39■□□□□ 0.7
SAMM50-201ENST00000350028 MRVI1Q9Y6F6 885 aa19.39■□□□□ 0.7
SAMM50-201ENST00000350028 KIF28PB7ZC32 967 aa19.39■□□□□ 0.69
SAMM50-201ENST00000350028 APBA3O96018 575 aa19.39■□□□□ 0.69
SAMM50-201ENST00000350028 SERPINB2P05120 415 aa19.39■□□□□ 0.69
SAMM50-201ENST00000350028 FAM160A1Q05DH4 1040 aa19.39■□□□□ 0.69
SAMM50-201ENST00000350028 SEC23AQ15436 765 aa19.39■□□□□ 0.69
SAMM50-201ENST00000350028 SF3A1Q15459 793 aaKnown RBP19.39■□□□□ 0.69
SAMM50-201ENST00000350028 CRY2Q49AN0 593 aa19.39■□□□□ 0.69
SAMM50-201ENST00000350028 CTR9Q6PD62 1173 aa19.39■□□□□ 0.69
SAMM50-201ENST00000350028 CKAP2LQ8IYA6 745 aa19.39■□□□□ 0.69
SAMM50-201ENST00000350028 TRIM22Q8IYM9 498 aa19.39■□□□□ 0.69
SAMM50-201ENST00000350028 STK11IPQ8N1F8 1099 aa19.39■□□□□ 0.69
SAMM50-201ENST00000350028 TDRD7Q8NHU6 1098 aaKnown RBP19.39■□□□□ 0.69
SAMM50-201ENST00000350028 FAM200AQ8TCP9 573 aa19.39■□□□□ 0.69
SAMM50-201ENST00000350028 SLC26A6Q9BXS9 759 aa19.39■□□□□ 0.69
SAMM50-201ENST00000350028 GJB4Q9NTQ9 266 aa19.39■□□□□ 0.69
SAMM50-201ENST00000350028 PCDHA7Q9UN72 937 aa19.39■□□□□ 0.69
SAMM50-201ENST00000350028 CLIC4Q9Y696 253 aa19.39■□□□□ 0.69
SAMM50-201ENST00000350028 ECM29Q5VYK3 1845 aa19.38■□□□□ 0.69
SAMM50-201ENST00000350028 KIAA1551Q9HCM1 1747 aa19.38■□□□□ 0.69
SAMM50-201ENST00000350028 DUOX1Q9NRD9 1551 aa19.38■□□□□ 0.69
SAMM50-201ENST00000350028 PRDX5P30044 214 aa19.38■□□□□ 0.69
SAMM50-201ENST00000350028 ANO1Q5XXA6 986 aa19.38■□□□□ 0.69
SAMM50-201ENST00000350028 ZNF804AQ7Z570 1209 aa19.38■□□□□ 0.69
SAMM50-201ENST00000350028 ZNF654Q8IZM8 581 aa19.38■□□□□ 0.69
SAMM50-201ENST00000350028 ENGASEQ8NFI3 743 aa19.38■□□□□ 0.69
SAMM50-201ENST00000350028 RBM17Q96I25 401 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms