RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 TFCP2Q12800 502 aa16.27■□□□□ 0.19
RLIM-202ENST00000349225 RAI14Q9P0K7 980 aa16.27■□□□□ 0.19
RLIM-202ENST00000349225 ADAMTSL3P82987 1691 aa16.26■□□□□ 0.19
RLIM-202ENST00000349225 MYH8P13535 1937 aa16.26■□□□□ 0.19
RLIM-202ENST00000349225 AMPD2Q01433 879 aa16.26■□□□□ 0.19
RLIM-202ENST00000349225 SPECC1Q5M775 1068 aa16.26■□□□□ 0.19
RLIM-202ENST00000349225 WDR93Q6P2C0 686 aa16.26■□□□□ 0.19
RLIM-202ENST00000349225 FAM237AA0A1B0GTK4 181 aa16.26■□□□□ 0.19
RLIM-202ENST00000349225 IGKV5-2P06315 115 aa16.26■□□□□ 0.19
RLIM-202ENST00000349225 TNNI3KQ59H18 835 aa16.26■□□□□ 0.19
RLIM-202ENST00000349225 RASGRP2Q7LDG7 609 aa16.26■□□□□ 0.19
RLIM-202ENST00000349225 BRAPQ7Z569 592 aa16.26■□□□□ 0.19
RLIM-202ENST00000349225 CPLX3Q8WVH0 158 aa16.26■□□□□ 0.19
RLIM-202ENST00000349225 MAP3K14Q99558 947 aa16.26■□□□□ 0.19
RLIM-202ENST00000349225 MAN1B1Q9UKM7 699 aa16.26■□□□□ 0.19
RLIM-202ENST00000349225 FAM169AQ9Y6X4 670 aa16.26■□□□□ 0.19
RLIM-202ENST00000349225 FPGT-TNNI3KV9GXZ4 949 aa16.26■□□□□ 0.19
RLIM-202ENST00000349225 KIF5CO60282 957 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 HOXC9P31274 260 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 RESP18Q5W5W9 173 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 SYNE3Q6ZMZ3 975 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 SUFUQ9UMX1 484 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 CCDC9Q9Y3X0 531 aaKnown RBP16.25■□□□□ 0.19
RLIM-202ENST00000349225 NWD2Q9ULI1 1742 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 PIK3C2AO00443 1686 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 CTAGE9A4FU28 777 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 HOXB7P09629 217 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 MYBL2P10244 700 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 MAP2K2P36507 400 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 ARHGAP25P42331 645 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 OLFM4Q6UX06 510 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 BANK1Q8NDB2 785 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 PANX2Q96RD6 677 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 CTAGE15A4D2H0 777 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 AKR1B15C9JRZ8 316 aaPredicted RBP16.25■□□□□ 0.19
RLIM-202ENST00000349225 MYO1BO43795 1136 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 CTAGE8P0CG41 777 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 HSPD1P10809 573 aaKnown RBP16.25■□□□□ 0.19
RLIM-202ENST00000349225 GGCXP38435 758 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 CTAGE6Q86UF2 777 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 CTAGE4Q8IX94 777 aa16.25■□□□□ 0.19
RLIM-202ENST00000349225 GSPT2Q8IYD1 628 aaKnown RBP16.25■□□□□ 0.19
RLIM-202ENST00000349225 SH3TC1Q8TE82 1336 aa16.24■□□□□ 0.19
RLIM-202ENST00000349225 HAUS7Q99871 368 aa16.24■□□□□ 0.19
RLIM-202ENST00000349225 DBF4Q9UBU7 674 aaPredicted RBP16.24■□□□□ 0.19
RLIM-202ENST00000349225 GRIN2DO15399 1336 aa16.24■□□□□ 0.19
RLIM-202ENST00000349225 APPP05067 770 aa16.24■□□□□ 0.19
RLIM-202ENST00000349225 GRIN1Q05586 938 aa16.24■□□□□ 0.19
RLIM-202ENST00000349225 SLC9C2Q5TAH2 1124 aa16.24■□□□□ 0.19
RLIM-202ENST00000349225 ANKRD20A12PQ8NF67 263 aa16.24■□□□□ 0.19
RLIM-202ENST00000349225 C4AP0C0L4 1744 aa16.24■□□□□ 0.19
RLIM-202ENST00000349225 C4BP0C0L5 1744 aa16.24■□□□□ 0.19
RLIM-202ENST00000349225 A0A1B0GTH6 734 aa16.24■□□□□ 0.19
RLIM-202ENST00000349225 ZMYND10O75800 440 aa16.24■□□□□ 0.19
RLIM-202ENST00000349225 IRAK1P51617 712 aa16.24■□□□□ 0.19
RLIM-202ENST00000349225 MNAT1P51948 309 aa16.24■□□□□ 0.19
RLIM-202ENST00000349225 GRAMD1CQ8IYS0 662 aa16.24■□□□□ 0.19
RLIM-202ENST00000349225 NKX2-3Q8TAU0 364 aa16.24■□□□□ 0.19
RLIM-202ENST00000349225 FAM212AQ96EL1 285 aa16.24■□□□□ 0.19
RLIM-202ENST00000349225 VIPAS39Q9H9C1 493 aa16.24■□□□□ 0.19
RLIM-202ENST00000349225 LINS1Q8NG48 757 aa16.23■□□□□ 0.19
RLIM-202ENST00000349225 NBPF3Q9H094 633 aa16.23■□□□□ 0.19
RLIM-202ENST00000349225 TAOK2Q9UL54 1235 aa16.23■□□□□ 0.19
RLIM-202ENST00000349225 RFX7Q2KHR2 1363 aa16.23■□□□□ 0.19
RLIM-202ENST00000349225 RNF225M0QZC1 329 aaPredicted RBP16.23■□□□□ 0.19
RLIM-202ENST00000349225 FOXP2O15409 715 aa16.23■□□□□ 0.19
RLIM-202ENST00000349225 PBX1P40424 430 aa16.23■□□□□ 0.19
RLIM-202ENST00000349225 RFX5P48382 616 aaPredicted RBP16.22■□□□□ 0.19
RLIM-202ENST00000349225 DSCC1Q9BVC3 393 aa16.22■□□□□ 0.19
RLIM-202ENST00000349225 DDX60Q8IY21 1712 aaKnown RBP16.22■□□□□ 0.19
RLIM-202ENST00000349225 MARF1Q9Y4F3 1742 aaKnown RBP16.22■□□□□ 0.19
RLIM-202ENST00000349225 CLGNO14967 610 aa16.22■□□□□ 0.19
RLIM-202ENST00000349225 FXR1P51114 621 aaKnown RBP eCLIP16.22■□□□□ 0.19
RLIM-202ENST00000349225 ERVK-24P63145 666 aa16.22■□□□□ 0.19
RLIM-202ENST00000349225 KBTBD3Q8NAB2 608 aa16.22■□□□□ 0.19
RLIM-202ENST00000349225 TRIM10Q9UDY6 481 aa16.22■□□□□ 0.19
RLIM-202ENST00000349225 HDAC6Q9UBN7 1215 aa16.22■□□□□ 0.19
RLIM-202ENST00000349225 KCNH3Q9ULD8 1083 aa16.22■□□□□ 0.19
RLIM-202ENST00000349225 UBE2Q2LH0YL09 131 aa16.21■□□□□ 0.19
RLIM-202ENST00000349225 PPP6R2O75170 966 aa16.21■□□□□ 0.19
RLIM-202ENST00000349225 PTPN12Q05209 780 aaKnown RBP16.21■□□□□ 0.19
RLIM-202ENST00000349225 VPS37DQ86XT2 251 aa16.21■□□□□ 0.19
RLIM-202ENST00000349225 ENOX1Q8TC92 643 aaKnown RBP16.21■□□□□ 0.19
RLIM-202ENST00000349225 NAPGQ99747 312 aaPredicted RBP16.21■□□□□ 0.19
RLIM-202ENST00000349225 KCNG1Q9UIX4 513 aa16.21■□□□□ 0.19
RLIM-202ENST00000349225 PTPRUQ92729 1446 aa16.21■□□□□ 0.19
RLIM-202ENST00000349225 A1BGP04217 495 aa16.21■□□□□ 0.19
RLIM-202ENST00000349225 ATP6V1AP38606 617 aa16.21■□□□□ 0.19
RLIM-202ENST00000349225 AIMP1Q12904 312 aaKnown RBP16.21■□□□□ 0.19
RLIM-202ENST00000349225 WHAMMP3Q1A5X7 153 aa16.21■□□□□ 0.19
RLIM-202ENST00000349225 CPLX2Q6PUV4 134 aaKnown RBP16.21■□□□□ 0.19
RLIM-202ENST00000349225 GBP3Q9H0R5 595 aa16.21■□□□□ 0.19
RLIM-202ENST00000349225 BTBD11A6QL63 1104 aa16.21■□□□□ 0.18
RLIM-202ENST00000349225 GYPCP04921 128 aa16.21■□□□□ 0.18
RLIM-202ENST00000349225 CASP14P31944 242 aa16.21■□□□□ 0.18
RLIM-202ENST00000349225 SARSP49591 514 aaKnown RBP16.21■□□□□ 0.18
RLIM-202ENST00000349225 USP14P54578 494 aa16.21■□□□□ 0.18
RLIM-202ENST00000349225 ANTXR2P58335 489 aa16.21■□□□□ 0.18
RLIM-202ENST00000349225 AKAP17AQ02040 695 aaKnown RBP16.21■□□□□ 0.18
RLIM-202ENST00000349225 TTC19Q6DKK2 380 aaPredicted RBP16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms