RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 CCDC152Q4G0S7 254 aa21.54■■□□□ 1.04
HDAC4-201ENST00000345617 UBE3BQ7Z3V4 1068 aa21.54■■□□□ 1.04
HDAC4-201ENST00000345617 CERS3Q8IU89 383 aa21.54■■□□□ 1.04
HDAC4-201ENST00000345617 ZKSCAN3Q9BRR0 538 aa21.54■■□□□ 1.04
HDAC4-201ENST00000345617 ZNF75DP51815 510 aa21.54■■□□□ 1.04
HDAC4-201ENST00000345617 NOC4LQ9BVI4 516 aaKnown RBP21.54■■□□□ 1.04
HDAC4-201ENST00000345617 RPAINQ86UA6 219 aa21.54■■□□□ 1.04
HDAC4-201ENST00000345617 SDCCAG3Q96C92 435 aa21.54■■□□□ 1.04
HDAC4-201ENST00000345617 EFCAB8A8MWE9 144 aa21.54■■□□□ 1.04
HDAC4-201ENST00000345617 SV2BQ7L1I2 683 aa21.54■■□□□ 1.04
HDAC4-201ENST00000345617 RHPN1Q8TCX5 695 aa21.54■■□□□ 1.04
HDAC4-201ENST00000345617 ANKRD44Q8N8A2 993 aa21.53■■□□□ 1.04
HDAC4-201ENST00000345617 HAUS3Q68CZ6 603 aa21.53■■□□□ 1.04
HDAC4-201ENST00000345617 DHX32Q7L7V1 743 aaKnown RBP21.53■■□□□ 1.04
HDAC4-201ENST00000345617 NUDT16Q96DE0 195 aaKnown RBP21.53■■□□□ 1.04
HDAC4-201ENST00000345617 EPS15L1Q9UBC2 864 aa21.53■■□□□ 1.04
HDAC4-201ENST00000345617 RNASELQ05823 741 aaKnown RBP21.53■■□□□ 1.04
HDAC4-201ENST00000345617 UAP1Q16222 522 aaPredicted RBP21.53■■□□□ 1.04
HDAC4-201ENST00000345617 C8orf34Q49A92 452 aa21.53■■□□□ 1.04
HDAC4-201ENST00000345617 IFT140Q96RY7 1462 aa21.53■■□□□ 1.04
HDAC4-201ENST00000345617 ERCC3P19447 782 aa21.53■■□□□ 1.04
HDAC4-201ENST00000345617 CCDC89Q8N998 374 aa21.53■■□□□ 1.04
HDAC4-201ENST00000345617 BANK1Q8NDB2 785 aa21.53■■□□□ 1.04
HDAC4-201ENST00000345617 STAG1Q8WVM7 1258 aa21.53■■□□□ 1.04
HDAC4-201ENST00000345617 HSP90AA4PQ58FG1 418 aa21.53■■□□□ 1.04
HDAC4-201ENST00000345617 RGS16O15492 202 aaPredicted RBP21.53■■□□□ 1.04
HDAC4-201ENST00000345617 ARHGAP4P98171 946 aa21.53■■□□□ 1.04
HDAC4-201ENST00000345617 DBN1Q16643 649 aa21.53■■□□□ 1.04
HDAC4-201ENST00000345617 OSCARQ8IYS5 282 aa21.53■■□□□ 1.04
HDAC4-201ENST00000345617 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.52■■□□□ 1.04
HDAC4-201ENST00000345617 PPANQ9NQ55 473 aaKnown RBP21.52■■□□□ 1.04
HDAC4-201ENST00000345617 RBSNQ9H1K0 784 aa21.52■■□□□ 1.04
HDAC4-201ENST00000345617 PAG1Q9NWQ8 432 aa21.52■■□□□ 1.04
HDAC4-201ENST00000345617 BCRP11274 1271 aa21.52■■□□□ 1.04
HDAC4-201ENST00000345617 BIVM-ERCC5R4GMW8 1640 aa21.52■■□□□ 1.04
HDAC4-201ENST00000345617 GNA14O95837 355 aa21.52■■□□□ 1.04
HDAC4-201ENST00000345617 HAND2P61296 217 aa21.52■■□□□ 1.04
HDAC4-201ENST00000345617 RUNDC3BQ96NL0 473 aa21.52■■□□□ 1.04
HDAC4-201ENST00000345617 CCDC85AQ96PX6 553 aaPredicted RBP21.52■■□□□ 1.04
HDAC4-201ENST00000345617 CTNND2Q9UQB3 1225 aa21.52■■□□□ 1.03
HDAC4-201ENST00000345617 CCDC117Q8IWD4 279 aaPredicted RBP21.51■■□□□ 1.03
HDAC4-201ENST00000345617 OPHN1O60890 802 aa21.51■■□□□ 1.03
HDAC4-201ENST00000345617 PFDN1O60925 122 aa21.51■■□□□ 1.03
HDAC4-201ENST00000345617 MCM7P33993 719 aa21.51■■□□□ 1.03
HDAC4-201ENST00000345617 TYW1Q9NV66 732 aaKnown RBP21.51■■□□□ 1.03
HDAC4-201ENST00000345617 CDK13Q14004 1512 aaKnown RBP21.51■■□□□ 1.03
HDAC4-201ENST00000345617 RAPGEF1Q13905 1077 aa21.51■■□□□ 1.03
HDAC4-201ENST00000345617 GRK7Q8WTQ7 553 aa21.51■■□□□ 1.03
HDAC4-201ENST00000345617 TMOD4Q9NZQ9 345 aa21.51■■□□□ 1.03
HDAC4-201ENST00000345617 PLXNC1O60486 1568 aa21.51■■□□□ 1.03
HDAC4-201ENST00000345617 HSPA8P11142 646 aaKnown RBP21.51■■□□□ 1.03
HDAC4-201ENST00000345617 SAR1BQ9Y6B6 198 aa21.51■■□□□ 1.03
HDAC4-201ENST00000345617 PPP2R5BQ15173 497 aa21.5■■□□□ 1.03
HDAC4-201ENST00000345617 CAPN7Q9Y6W3 813 aa21.5■■□□□ 1.03
HDAC4-201ENST00000345617 IL15P40933 162 aaPredicted RBP21.5■■□□□ 1.03
HDAC4-201ENST00000345617 PRG4Q92954 1404 aaPredicted RBP21.5■■□□□ 1.03
HDAC4-201ENST00000345617 KRT3P12035 628 aa21.5■■□□□ 1.03
HDAC4-201ENST00000345617 NRBF2Q96F24 287 aa21.5■■□□□ 1.03
HDAC4-201ENST00000345617 CLSTN2Q9H4D0 955 aa21.5■■□□□ 1.03
HDAC4-201ENST00000345617 PPP1R9AQ9ULJ8 1098 aa21.5■■□□□ 1.03
HDAC4-201ENST00000345617 NUTM2BA6NNL0 878 aaPredicted RBP21.5■■□□□ 1.03
HDAC4-201ENST00000345617 NUTM2EB1AL46 878 aaPredicted RBP21.5■■□□□ 1.03
HDAC4-201ENST00000345617 ATP8B1O43520 1251 aa21.5■■□□□ 1.03
HDAC4-201ENST00000345617 GJC1P36383 396 aa21.5■■□□□ 1.03
HDAC4-201ENST00000345617 IFIH1Q9BYX4 1025 aaKnown RBP21.5■■□□□ 1.03
HDAC4-201ENST00000345617 MIS18AQ9NYP9 233 aa21.5■■□□□ 1.03
HDAC4-201ENST00000345617 SEPT10Q9P0V9 454 aa21.5■■□□□ 1.03
HDAC4-201ENST00000345617 DDX41Q9UJV9 622 aaKnown RBP21.5■■□□□ 1.03
HDAC4-201ENST00000345617 ABCC5O15440 1437 aa21.5■■□□□ 1.03
HDAC4-201ENST00000345617 CCT6AP40227 531 aaKnown RBP21.5■■□□□ 1.03
HDAC4-201ENST00000345617 LDHAL6AQ6ZMR3 332 aa21.5■■□□□ 1.03
HDAC4-201ENST00000345617 U2AF2P26368 475 aaKnown RBP eCLIP21.49■■□□□ 1.033e-6■■■□□ 15.4
HDAC4-201ENST00000345617 FAF1Q9UNN5 650 aaPredicted RBP21.49■■□□□ 1.03
HDAC4-201ENST00000345617 ASIC2Q16515 512 aa21.49■■□□□ 1.03
HDAC4-201ENST00000345617 TACO1Q9BSH4 297 aaKnown RBP21.49■■□□□ 1.03
HDAC4-201ENST00000345617 TRIM37O94972 964 aa21.49■■□□□ 1.03
HDAC4-201ENST00000345617 KRT71Q3SY84 523 aa21.49■■□□□ 1.03
HDAC4-201ENST00000345617 MBIPQ9NS73 344 aa21.49■■□□□ 1.03
HDAC4-201ENST00000345617 ALDH1L1O75891 902 aa21.49■■□□□ 1.03
HDAC4-201ENST00000345617 WHAMMQ8TF30 809 aa21.49■■□□□ 1.03
HDAC4-201ENST00000345617 CCDC124Q96CT7 223 aaKnown RBP21.49■■□□□ 1.03
HDAC4-201ENST00000345617 CAPS2Q9BXY5 557 aa21.49■■□□□ 1.03
HDAC4-201ENST00000345617 KCNG1Q9UIX4 513 aa21.49■■□□□ 1.03
HDAC4-201ENST00000345617 TBC1D8BQ0IIM8 1120 aa21.49■■□□□ 1.03
HDAC4-201ENST00000345617 PAK1Q13153 545 aa21.49■■□□□ 1.03
HDAC4-201ENST00000345617 DCAF17Q5H9S7 520 aaPredicted RBP21.49■■□□□ 1.03
HDAC4-201ENST00000345617 RSPH3Q86UC2 560 aa21.49■■□□□ 1.03
HDAC4-201ENST00000345617 ASIC3Q9UHC3 531 aa21.49■■□□□ 1.03
HDAC4-201ENST00000345617 EXOC7Q9UPT5 735 aa21.49■■□□□ 1.03
HDAC4-201ENST00000345617 PPP1R1BQ9UD71 204 aaPredicted RBP21.48■■□□□ 1.03
HDAC4-201ENST00000345617 F6X3S4 739 aa21.48■■□□□ 1.03
HDAC4-201ENST00000345617 AK2P54819 239 aa21.48■■□□□ 1.03
HDAC4-201ENST00000345617 NECAB1Q8N987 351 aa21.48■■□□□ 1.03
HDAC4-201ENST00000345617 ZNF500O60304 480 aaPredicted RBP21.48■■□□□ 1.03
HDAC4-201ENST00000345617 STX2P32856 288 aa21.48■■□□□ 1.03
HDAC4-201ENST00000345617 PLCD3Q8N3E9 789 aa21.48■■□□□ 1.03
HDAC4-201ENST00000345617 FAM69CQ0P6D2 419 aa21.48■■□□□ 1.03
HDAC4-201ENST00000345617 RIPOR2Q9Y4F9 1068 aa21.48■■□□□ 1.03
HDAC4-201ENST00000345617 MUM1L1Q5H9M0 696 aa21.48■■□□□ 1.03
HDAC4-201ENST00000345617 CCDC125Q86Z20 511 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms