RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 ZFPM1Q8IX07 1006 aa19.61■□□□□ 0.73
ATG4B-201ENST00000344376 ZKSCAN4Q969J2 545 aaPredicted RBP19.61■□□□□ 0.73
ATG4B-201ENST00000344376 SNCAIPQ9Y6H5 919 aa19.61■□□□□ 0.73
ATG4B-201ENST00000344376 MAST2Q6P0Q8 1798 aa19.61■□□□□ 0.73
ATG4B-201ENST00000344376 NPM3O75607 178 aaKnown RBP19.61■□□□□ 0.73
ATG4B-201ENST00000344376 CFHR5Q9BXR6 569 aa19.61■□□□□ 0.73
ATG4B-201ENST00000344376 DGKZQ13574 1117 aa19.6■□□□□ 0.73
ATG4B-201ENST00000344376 NOM1Q5C9Z4 860 aaKnown RBP19.6■□□□□ 0.73
ATG4B-201ENST00000344376 TEX11Q8IYF3 940 aa19.6■□□□□ 0.73
ATG4B-201ENST00000344376 CNKSR2Q8WXI2 1034 aa19.6■□□□□ 0.73
ATG4B-201ENST00000344376 BCL11AQ9H165 835 aa19.6■□□□□ 0.73
ATG4B-201ENST00000344376 DDX4Q9NQI0 724 aaKnown RBP19.6■□□□□ 0.73
ATG4B-201ENST00000344376 PIH1D3Q9NQM4 214 aaKnown RBP19.6■□□□□ 0.73
ATG4B-201ENST00000344376 ZNF112Q9UJU3 913 aa19.6■□□□□ 0.73
ATG4B-201ENST00000344376 TESPA1A2RU30 521 aaPredicted RBP19.59■□□□□ 0.73
ATG4B-201ENST00000344376 IGF2BP3O00425 579 aaKnown RBP eCLIP19.59■□□□□ 0.73
ATG4B-201ENST00000344376 IDH1O75874 414 aaKnown RBP19.59■□□□□ 0.73
ATG4B-201ENST00000344376 INPP5BP32019 993 aa19.59■□□□□ 0.73
ATG4B-201ENST00000344376 RRP1P56182 461 aaKnown RBP19.59■□□□□ 0.73
ATG4B-201ENST00000344376 GPR25O00155 361 aa19.58■□□□□ 0.73
ATG4B-201ENST00000344376 PPATQ06203 517 aa19.58■□□□□ 0.73
ATG4B-201ENST00000344376 PPIL2Q13356 520 aa19.58■□□□□ 0.73
ATG4B-201ENST00000344376 TMED8Q6PL24 325 aaPredicted RBP19.58■□□□□ 0.73
ATG4B-201ENST00000344376 ABHD8Q96I13 439 aa19.58■□□□□ 0.73
ATG4B-201ENST00000344376 MCOLN1Q9GZU1 580 aa19.58■□□□□ 0.73
ATG4B-201ENST00000344376 AATFQ9NY61 560 aaKnown RBP eCLIP19.58■□□□□ 0.73
ATG4B-201ENST00000344376 ATRNL1Q5VV63 1379 aa19.58■□□□□ 0.72
ATG4B-201ENST00000344376 CASP8AP2Q9UKL3 1982 aa19.58■□□□□ 0.72
ATG4B-201ENST00000344376 CCL15-CCL14A0A0B4J2E2 113 aa19.57■□□□□ 0.72
ATG4B-201ENST00000344376 DDTLA6NHG4 134 aaPredicted RBP19.57■□□□□ 0.72
ATG4B-201ENST00000344376 MAP3K12Q12852 859 aa19.57■□□□□ 0.72
ATG4B-201ENST00000344376 SNAPC2Q13487 334 aa19.57■□□□□ 0.72
ATG4B-201ENST00000344376 TTF1Q15361 905 aaPredicted RBP19.57■□□□□ 0.72
ATG4B-201ENST00000344376 CCL15Q16663 113 aa19.57■□□□□ 0.72
ATG4B-201ENST00000344376 NOL9Q5SY16 702 aaKnown RBP19.57■□□□□ 0.72
ATG4B-201ENST00000344376 SH3BP5LQ7L8J4 393 aa19.57■□□□□ 0.72
ATG4B-201ENST00000344376 MS4A4AQ96JQ5 239 aa19.57■□□□□ 0.72
ATG4B-201ENST00000344376 AK9Q5TCS8 1911 aa19.57■□□□□ 0.72
ATG4B-201ENST00000344376 LAMB1P07942 1786 aa19.57■□□□□ 0.72
ATG4B-201ENST00000344376 CETPP11597 493 aa19.57■□□□□ 0.72
ATG4B-201ENST00000344376 CYP7A1P22680 504 aa19.57■□□□□ 0.72
ATG4B-201ENST00000344376 PPP4CP60510 307 aa19.57■□□□□ 0.72
ATG4B-201ENST00000344376 CERS3Q8IU89 383 aa19.57■□□□□ 0.72
ATG4B-201ENST00000344376 SH3RF3Q8TEJ3 882 aaPredicted RBP19.57■□□□□ 0.72
ATG4B-201ENST00000344376 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.57■□□□□ 0.72
ATG4B-201ENST00000344376 ZNF296Q8WUU4 475 aaPredicted RBP19.57■□□□□ 0.72
ATG4B-201ENST00000344376 LRRCC1Q9C099 1032 aa19.57■□□□□ 0.72
ATG4B-201ENST00000344376 OSBPL5Q9H0X9 879 aaPredicted RBP19.57■□□□□ 0.72
ATG4B-201ENST00000344376 COL2A1P02458 1487 aaPredicted RBP19.57■□□□□ 0.72
ATG4B-201ENST00000344376 DOCK2Q92608 1830 aa19.56■□□□□ 0.72
ATG4B-201ENST00000344376 FKTNO75072 461 aa19.56■□□□□ 0.72
ATG4B-201ENST00000344376 CTU1Q7Z7A3 348 aaKnown RBP19.56■□□□□ 0.72
ATG4B-201ENST00000344376 BRI3BPQ8WY22 251 aa19.56■□□□□ 0.72
ATG4B-201ENST00000344376 PICK1Q9NRD5 415 aa19.56■□□□□ 0.72
ATG4B-201ENST00000344376 NDUFB9Q9Y6M9 179 aa19.56■□□□□ 0.72
ATG4B-201ENST00000344376 IRF6O14896 467 aa19.55■□□□□ 0.72
ATG4B-201ENST00000344376 MAGEB6Q8N7X4 407 aa19.55■□□□□ 0.72
ATG4B-201ENST00000344376 PTPN18Q99952 460 aa19.55■□□□□ 0.72
ATG4B-201ENST00000344376 MAP3K10Q02779 954 aa19.54■□□□□ 0.72
ATG4B-201ENST00000344376 ADGRA1Q86SQ6 560 aa19.54■□□□□ 0.72
ATG4B-201ENST00000344376 SCYL3Q8IZE3 742 aa19.54■□□□□ 0.72
ATG4B-201ENST00000344376 DNAJC2Q99543 621 aaKnown RBP19.54■□□□□ 0.72
ATG4B-201ENST00000344376 ANTXR1Q9H6X2 564 aa19.54■□□□□ 0.72
ATG4B-201ENST00000344376 PHF20L1A8MW92 1017 aa19.53■□□□□ 0.72
ATG4B-201ENST00000344376 TBC1D12O60347 775 aa19.53■□□□□ 0.72
ATG4B-201ENST00000344376 CRHR2Q13324 411 aa19.53■□□□□ 0.72
ATG4B-201ENST00000344376 DHX36Q9H2U1 1008 aaKnown RBP19.53■□□□□ 0.72
ATG4B-201ENST00000344376 R3HDMLQ9H3Y0 253 aa19.53■□□□□ 0.72
ATG4B-201ENST00000344376 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.53■□□□□ 0.72
ATG4B-201ENST00000344376 CTNND1O60716 968 aaKnown RBP19.53■□□□□ 0.72
ATG4B-201ENST00000344376 TAF1CQ15572 869 aaPredicted RBP19.53■□□□□ 0.72
ATG4B-201ENST00000344376 TGFBRAP1Q8WUH2 860 aa19.53■□□□□ 0.72
ATG4B-201ENST00000344376 ZCCHC17Q9NP64 241 aaKnown RBP19.53■□□□□ 0.72
ATG4B-201ENST00000344376 GOLIM4O00461 696 aa19.52■□□□□ 0.71
ATG4B-201ENST00000344376 MAPKAPK5Q8IW41 473 aa19.52■□□□□ 0.71
ATG4B-201ENST00000344376 ZFYVE28Q9HCC9 887 aa19.52■□□□□ 0.71
ATG4B-201ENST00000344376 KCNH4Q9UQ05 1017 aa19.52■□□□□ 0.71
ATG4B-201ENST00000344376 FLT1P17948 1338 aa19.51■□□□□ 0.71
ATG4B-201ENST00000344376 ATP5JP18859 108 aa19.51■□□□□ 0.71
ATG4B-201ENST00000344376 PKN2Q16513 984 aaKnown RBP19.51■□□□□ 0.71
ATG4B-201ENST00000344376 MIGA1Q8NAN2 632 aa19.51■□□□□ 0.71
ATG4B-201ENST00000344376 TRIM34Q9BYJ4 488 aa19.51■□□□□ 0.71
ATG4B-201ENST00000344376 DCTPP1Q9H773 170 aa19.51■□□□□ 0.71
ATG4B-201ENST00000344376 PI4KBQ9UBF8 816 aa19.51■□□□□ 0.71
ATG4B-201ENST00000344376 HERC5Q9UII4 1024 aaKnown RBP19.51■□□□□ 0.71
ATG4B-201ENST00000344376 DYNLL1P63167 89 aaKnown RBP19.5■□□□□ 0.71
ATG4B-201ENST00000344376 FAM43AQ8N2R8 423 aa19.5■□□□□ 0.71
ATG4B-201ENST00000344376 CCDC85CA6NKD9 419 aa19.49■□□□□ 0.71
ATG4B-201ENST00000344376 CXCL11O14625 94 aa19.49■□□□□ 0.71
ATG4B-201ENST00000344376 SMARCA5O60264 1052 aaPredicted RBP19.49■□□□□ 0.71
ATG4B-201ENST00000344376 HLA-DOAP06340 250 aa19.49■□□□□ 0.71
ATG4B-201ENST00000344376 PTPRAP18433 802 aa19.49■□□□□ 0.71
ATG4B-201ENST00000344376 USP5P45974 858 aa19.49■□□□□ 0.71
ATG4B-201ENST00000344376 SLC9C2Q5TAH2 1124 aa19.49■□□□□ 0.71
ATG4B-201ENST00000344376 ERO1AQ96HE7 468 aa19.49■□□□□ 0.71
ATG4B-201ENST00000344376 GPATCH3Q96I76 525 aa19.49■□□□□ 0.71
ATG4B-201ENST00000344376 BOLA2Q9H3K6 86 aa19.49■□□□□ 0.71
ATG4B-201ENST00000344376 PAG1Q9NWQ8 432 aa19.49■□□□□ 0.71
ATG4B-201ENST00000344376 ZHX2Q9Y6X8 837 aa19.49■□□□□ 0.71
ATG4B-201ENST00000344376 FAM196BA6NMK8 535 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms