RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 ST3GAL1Q11201 340 aa10.05□□□□□ -0.8
SP140-201ENST00000343805 NECTIN1Q15223 517 aa10.05□□□□□ -0.8
SP140-201ENST00000343805 SLC5A9Q2M3M2 681 aa10.05□□□□□ -0.8
SP140-201ENST00000343805 ZNF790Q6PG37 636 aa10.05□□□□□ -0.8
SP140-201ENST00000343805 BLOC1S2Q6QNY1 142 aa10.05□□□□□ -0.8
SP140-201ENST00000343805 NEUROD6Q96NK8 337 aa10.05□□□□□ -0.8
SP140-201ENST00000343805 A1CFQ9NQ94 594 aaKnown RBP10.05□□□□□ -0.8
SP140-201ENST00000343805 NOVA2Q9UNW9 492 aaKnown RBP10.05□□□□□ -0.8
SP140-201ENST00000343805 ZC3H4Q9UPT8 1303 aaKnown RBP10.05□□□□□ -0.8
SP140-201ENST00000343805 PPP1R3GB7ZBB8 358 aa10.05□□□□□ -0.8
SP140-201ENST00000343805 ALDH1L1O75891 902 aa10.05□□□□□ -0.8
SP140-201ENST00000343805 SMC2O95347 1197 aa10.05□□□□□ -0.8
SP140-201ENST00000343805 HDLBPQ00341 1268 aaKnown RBP10.05□□□□□ -0.8
SP140-201ENST00000343805 GRIK3Q13003 919 aa10.05□□□□□ -0.8
SP140-201ENST00000343805 ERC1Q8IUD2 1116 aa10.05□□□□□ -0.8
SP140-201ENST00000343805 CCDC191Q8NCU4 936 aa10.05□□□□□ -0.8
SP140-201ENST00000343805 ATL2Q8NHH9 583 aa10.05□□□□□ -0.8
SP140-201ENST00000343805 GOLGA5Q8TBA6 731 aa10.05□□□□□ -0.8
SP140-201ENST00000343805 DDX21Q9NR30 783 aaKnown RBP eCLIP10.05□□□□□ -0.8
SP140-201ENST00000343805 SUN2Q9UH99 717 aa10.05□□□□□ -0.8
SP140-201ENST00000343805 GOLGA6L4A6NEF3 574 aa10.04□□□□□ -0.8
SP140-201ENST00000343805 LILRB3O75022 631 aa10.04□□□□□ -0.8
SP140-201ENST00000343805 HOXB7P09629 217 aa10.04□□□□□ -0.8
SP140-201ENST00000343805 KCNH2Q12809 1159 aa10.04□□□□□ -0.8
SP140-201ENST00000343805 VPS53Q5VIR6 699 aa10.04□□□□□ -0.8
SP140-201ENST00000343805 VEZTQ9HBM0 779 aa10.04□□□□□ -0.8
SP140-201ENST00000343805 ZSWIM6Q9HCJ5 1215 aa10.04□□□□□ -0.8
SP140-201ENST00000343805 PPME1Q9Y570 386 aa10.04□□□□□ -0.8
SP140-201ENST00000343805 ATP6V1DQ9Y5K8 247 aa10.04□□□□□ -0.8
SP140-201ENST00000343805 V9GYY5 206 aaPredicted RBP10.04□□□□□ -0.8
SP140-201ENST00000343805 RGPD2P0DJD1 1756 aa10.04□□□□□ -0.8
SP140-201ENST00000343805 TFCP2Q12800 502 aa10.04□□□□□ -0.8
SP140-201ENST00000343805 PDCD2Q16342 344 aaPredicted RBP10.04□□□□□ -0.8
SP140-201ENST00000343805 TTC19Q6DKK2 380 aaPredicted RBP10.04□□□□□ -0.8
SP140-201ENST00000343805 CCDC85AQ96PX6 553 aaPredicted RBP10.04□□□□□ -0.8
SP140-201ENST00000343805 JAK2O60674 1132 aa10.03□□□□□ -0.8
SP140-201ENST00000343805 NAIF1Q69YI7 327 aaPredicted RBP10.03□□□□□ -0.8
SP140-201ENST00000343805 LARP1Q6PKG0 1096 aaKnown RBP10.03□□□□□ -0.8
SP140-201ENST00000343805 DZIP3Q86Y13 1208 aaKnown RBP10.03□□□□□ -0.8
SP140-201ENST00000343805 TTC5Q8N0Z6 440 aa10.03□□□□□ -0.8
SP140-201ENST00000343805 ACRBPQ8NEB7 543 aa10.03□□□□□ -0.8
SP140-201ENST00000343805 ZNF396Q96N95 335 aaPredicted RBP10.03□□□□□ -0.8
SP140-201ENST00000343805 CHCHD3Q9NX63 227 aaKnown RBP10.03□□□□□ -0.8
SP140-201ENST00000343805 ANKARQ7Z5J8 1434 aa10.03□□□□□ -0.8
SP140-201ENST00000343805 NEURL1BA8MQ27 555 aa10.03□□□□□ -0.8
SP140-201ENST00000343805 RBM6P78332 1123 aaKnown RBP10.03□□□□□ -0.8
SP140-201ENST00000343805 ANKRD13DQ6ZTN6 518 aa10.03□□□□□ -0.8
SP140-201ENST00000343805 FBXO33Q7Z6M2 555 aa10.03□□□□□ -0.8
SP140-201ENST00000343805 TTC6Q86TZ1 520 aa10.03□□□□□ -0.8
SP140-201ENST00000343805 SNRNP27Q8WVK2 155 aaKnown RBP10.03□□□□□ -0.8
SP140-201ENST00000343805 TMX4Q9H1E5 349 aaPredicted RBP10.03□□□□□ -0.8
SP140-201ENST00000343805 ARHGAP23Q9P227 1491 aa10.03□□□□□ -0.8
SP140-201ENST00000343805 A0A087WZG4 1122 aa10.03□□□□□ -0.8
SP140-201ENST00000343805 MTX1Q13505 466 aa10.03□□□□□ -0.8
SP140-201ENST00000343805 GCKRQ14397 625 aa10.03□□□□□ -0.8
SP140-201ENST00000343805 TBC1D25Q3MII6 688 aa10.03□□□□□ -0.8
SP140-201ENST00000343805 EFCAB13Q8IY85 973 aa10.03□□□□□ -0.8
SP140-201ENST00000343805 MAP4K1Q92918 833 aa10.03□□□□□ -0.8
SP140-201ENST00000343805 DBNDD2Q9BQY9 259 aa10.03□□□□□ -0.8
SP140-201ENST00000343805 PSD3Q9NYI0 1048 aa10.03□□□□□ -0.8
SP140-201ENST00000343805 SYNPO2Q9UMS6 1093 aa10.03□□□□□ -0.8
SP140-201ENST00000343805 SMTNL1A8MU46 457 aa10.02□□□□□ -0.81
SP140-201ENST00000343805 MYBL2P10244 700 aa10.02□□□□□ -0.81
SP140-201ENST00000343805 GPS2Q13227 327 aa10.02□□□□□ -0.81
SP140-201ENST00000343805 CHST3Q7LGC8 479 aa10.02□□□□□ -0.81
SP140-201ENST00000343805 DRAXINQ8NBI3 349 aaPredicted RBP10.02□□□□□ -0.81
SP140-201ENST00000343805 HELBQ8NG08 1087 aaPredicted RBP10.02□□□□□ -0.81
SP140-201ENST00000343805 MTA3Q9BTC8 594 aa10.02□□□□□ -0.81
SP140-201ENST00000343805 DBNLQ9UJU6 430 aaKnown RBP10.02□□□□□ -0.81
SP140-201ENST00000343805 CACNA1FO60840 1977 aa10.02□□□□□ -0.81
SP140-201ENST00000343805 LTN1O94822 1766 aa10.02□□□□□ -0.81
SP140-201ENST00000343805 PXDNLA1KZ92 1463 aa10.02□□□□□ -0.81
SP140-201ENST00000343805 SLIT1O75093 1534 aa10.02□□□□□ -0.81
SP140-201ENST00000343805 TBC1D8BQ0IIM8 1120 aa10.02□□□□□ -0.81
SP140-201ENST00000343805 RASA3Q14644 834 aa10.02□□□□□ -0.81
SP140-201ENST00000343805 CCDC186Q7Z3E2 898 aa10.02□□□□□ -0.81
SP140-201ENST00000343805 ZSCAN31Q96LW9 406 aaPredicted RBP10.02□□□□□ -0.81
SP140-201ENST00000343805 SUGT1Q9Y2Z0 365 aa10.02□□□□□ -0.81
SP140-201ENST00000343805 AP5Z1O43299 807 aa10.01□□□□□ -0.81
SP140-201ENST00000343805 PSMA5P28066 241 aa10.01□□□□□ -0.81
SP140-201ENST00000343805 TIMM10P62072 90 aa10.01□□□□□ -0.81
SP140-201ENST00000343805 RNF20Q5VTR2 975 aa10.01□□□□□ -0.81
SP140-201ENST00000343805 ZNF280DQ6N043 979 aa10.01□□□□□ -0.81
SP140-201ENST00000343805 AGAP3Q96P47 875 aa10.01□□□□□ -0.81
SP140-201ENST00000343805 LZTS2Q9BRK4 669 aa10.01□□□□□ -0.81
SP140-201ENST00000343805 TANGO6Q9C0B7 1094 aa10.01□□□□□ -0.81
SP140-201ENST00000343805 SH2B1Q9NRF2 756 aaPredicted RBP10.01□□□□□ -0.81
SP140-201ENST00000343805 CPSF2Q9P2I0 782 aaKnown RBP10.01□□□□□ -0.81
SP140-201ENST00000343805 PCDHGC3Q9UN70 934 aa10.01□□□□□ -0.81
SP140-201ENST00000343805 ADGRG1Q9Y653 693 aa10.01□□□□□ -0.81
SP140-201ENST00000343805 N4BP2Q86UW6 1770 aaPredicted RBP10.01□□□□□ -0.81
SP140-201ENST00000343805 IMPDH2P12268 514 aa10.01□□□□□ -0.81
SP140-201ENST00000343805 TATP17735 454 aaPredicted RBP10.01□□□□□ -0.81
SP140-201ENST00000343805 PDE6BP35913 854 aa10.01□□□□□ -0.81
SP140-201ENST00000343805 RPS6KA3P51812 740 aa10.01□□□□□ -0.81
SP140-201ENST00000343805 KRT85P78386 507 aa10.01□□□□□ -0.81
SP140-201ENST00000343805 GUCY1B3Q02153 619 aa10.01□□□□□ -0.81
SP140-201ENST00000343805 EN1Q05925 392 aaPredicted RBP10.01□□□□□ -0.81
SP140-201ENST00000343805 PDIA5Q14554 519 aa10.01□□□□□ -0.81
SP140-201ENST00000343805 LMBR1LQ6UX01 489 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms