RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 E7EWF7 191 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 ATP5JP18859 108 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 ANKLE2Q86XL3 938 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 CABS1Q96KC9 395 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 MYO3AQ8NEV4 1616 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 MACROD2A1Z1Q3 448 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 PPFIA3O75145 1194 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 TAOK1Q7L7X3 1001 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 BPIFA3Q9BQP9 254 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 FAM204AQ9H8W3 233 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 PRPF4BQ13523 1007 aaKnown RBP5.38□□□□□ -1.55
CSMD3-203ENST00000343508 MYSM1Q5VVJ2 828 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 COPS6Q7L5N1 327 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 BCAS4Q8TDM0 211 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 SECISBP2LQ93073 1101 aaKnown RBP5.38□□□□□ -1.55
CSMD3-203ENST00000343508 JAK2O60674 1132 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 CLCN6P51797 869 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 LMBR1LQ6UX01 489 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 NUCKS1Q9H1E3 243 aaKnown RBP5.38□□□□□ -1.55
CSMD3-203ENST00000343508 CLGNO14967 610 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 TRHP20396 242 aaPredicted RBP5.38□□□□□ -1.55
CSMD3-203ENST00000343508 CMA1P23946 247 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 MAGEA9P43362 315 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 HNRNPH2P55795 449 aaKnown RBP5.38□□□□□ -1.55
CSMD3-203ENST00000343508 PAK2Q13177 524 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 LONRF2Q1L5Z9 754 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 CCDC40Q4G0X9 1142 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 VPS16Q9H269 839 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 MMRN2Q9H8L6 949 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 PLCB1Q9NQ66 1216 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 RTEL1Q9NZ71 1219 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 NFE2L3Q9Y4A8 694 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 KDRP35968 1356 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 CARMIL3Q8ND23 1372 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 A0A1W2PQ27 194 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 A0A1W2PQ64 194 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 A0A1W2PQD8 194 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 GIGYF1O75420 1035 aaPredicted RBP5.38□□□□□ -1.55
CSMD3-203ENST00000343508 GSTTP1A0A1W2PQM5 241 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 MCM7P33993 719 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 NECTIN1Q15223 517 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 FERMT2Q96AC1 680 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 TRIM7Q9C029 511 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 DDX21Q9NR30 783 aaKnown RBP eCLIP5.38□□□□□ -1.55
CSMD3-203ENST00000343508 TMOD3Q9NYL9 352 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 STX17P56962 302 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 FBXO31Q5XUX0 539 aaPredicted RBP5.38□□□□□ -1.55
CSMD3-203ENST00000343508 TBC1D5Q92609 795 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 PDE11AQ9HCR9 933 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 CABP5Q9NP86 173 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 ANKRD26Q9UPS8 1709 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 SSBP05455 408 aaKnown RBP eCLIP5.37□□□□□ -1.55
CSMD3-203ENST00000343508 PTH1RQ03431 593 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 DHX37Q8IY37 1157 aaKnown RBP5.37□□□□□ -1.55
CSMD3-203ENST00000343508 JAKMIP2Q96AA8 810 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 ADGRB3O60242 1522 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 SETD1BQ9UPS6 1966 aaKnown RBP5.37□□□□□ -1.55
CSMD3-203ENST00000343508 TSPY2A6NKD2 308 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 ADCK5Q3MIX3 580 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 UBLCP1Q8WVY7 318 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-203ENST00000343508 NOC4LQ9BVI4 516 aaKnown RBP5.37□□□□□ -1.55
CSMD3-203ENST00000343508 STRN4Q9NRL3 753 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 ARAP3Q8WWN8 1544 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 ATP5J2-PTCD1G3V325 749 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 FOXO3O43524 673 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 BUB1BO60566 1050 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-203ENST00000343508 PTCD1O75127 700 aaKnown RBP5.37□□□□□ -1.55
CSMD3-203ENST00000343508 PNMA6AP0CW24 399 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-203ENST00000343508 DESP17661 470 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 KCNJ6P48051 423 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 STXBP4Q6ZWJ1 553 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 USP28Q96RU2 1077 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 CAMSAP1Q5T5Y3 1602 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 CTIFO43310 598 aaKnown RBP5.37□□□□□ -1.55
CSMD3-203ENST00000343508 ZNF853P0CG23 659 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 GNAQP50148 359 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 SCRN1Q12765 414 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 MTMR3Q13615 1198 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 NAA25Q14CX7 972 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 CNNM4Q6P4Q7 775 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 ARMC9Q7Z3E5 817 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 FBF1Q8TES7 1133 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 METTL22Q9BUU2 404 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-203ENST00000343508 NEURL4Q96JN8 1562 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 SLC8A1P32418 973 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 PLCD1P51178 756 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 HAUS4Q9H6D7 363 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 CDC23Q9UJX2 597 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 ACTN4O43707 911 aaKnown RBP5.37□□□□□ -1.55
CSMD3-203ENST00000343508 PFKFB1P16118 471 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 APBA1Q02410 837 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 APPBP2Q92624 585 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.37□□□□□ -1.55
CSMD3-203ENST00000343508 CTNND2Q9UQB3 1225 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 MAP3K19Q56UN5 1328 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 A0A1W2PRG0 241 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 NBPF14Q5TI25 921 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 CCDC84Q86UT8 332 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-203ENST00000343508 KRT9P35527 623 aa5.37□□□□□ -1.55
CSMD3-203ENST00000343508 ATP2B3Q16720 1220 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms