RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 GFAPP14136 432 aa19.55■□□□□ 0.72
SMAD4-201ENST00000342988 AKR1B15C9JRZ8 316 aaPredicted RBP19.55■□□□□ 0.72
SMAD4-201ENST00000342988 CYP26C1Q6V0L0 522 aa19.55■□□□□ 0.72
SMAD4-201ENST00000342988 HACE1Q8IYU2 909 aa19.55■□□□□ 0.72
SMAD4-201ENST00000342988 MRPS27Q92552 414 aaKnown RBP19.55■□□□□ 0.72
SMAD4-201ENST00000342988 EFCC1Q9HA90 598 aa19.55■□□□□ 0.72
SMAD4-201ENST00000342988 PALMDQ9NP74 551 aa19.55■□□□□ 0.72
SMAD4-201ENST00000342988 NMIQ13287 307 aaPredicted RBP19.55■□□□□ 0.72
SMAD4-201ENST00000342988 SMAP1Q8IYB5 467 aaPredicted RBP19.55■□□□□ 0.72
SMAD4-201ENST00000342988 NAPGQ99747 312 aaPredicted RBP19.55■□□□□ 0.72
SMAD4-201ENST00000342988 LMNB1P20700 586 aa19.55■□□□□ 0.72
SMAD4-201ENST00000342988 EXOC7Q9UPT5 735 aa19.54■□□□□ 0.72
SMAD4-201ENST00000342988 AKNAQ7Z591 1439 aa19.54■□□□□ 0.72
SMAD4-201ENST00000342988 MAD1L1Q9Y6D9 718 aa19.54■□□□□ 0.72
SMAD4-201ENST00000342988 PAK2Q13177 524 aa19.54■□□□□ 0.72
SMAD4-201ENST00000342988 DTHD1Q6ZMT9 781 aa19.54■□□□□ 0.72
SMAD4-201ENST00000342988 TXLNGQ9NUQ3 528 aa19.54■□□□□ 0.72
SMAD4-201ENST00000342988 MAN1A1P33908 653 aa19.54■□□□□ 0.72
SMAD4-201ENST00000342988 PCYT1AP49585 367 aa19.54■□□□□ 0.72
SMAD4-201ENST00000342988 DAPK1P53355 1430 aa19.54■□□□□ 0.72
SMAD4-201ENST00000342988 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.54■□□□□ 0.72
SMAD4-201ENST00000342988 KANK4Q5T7N3 995 aaPredicted RBP19.54■□□□□ 0.72
SMAD4-201ENST00000342988 PANK2Q9BZ23 570 aa19.54■□□□□ 0.72
SMAD4-201ENST00000342988 PTPRCP08575 1304 aa19.54■□□□□ 0.72
SMAD4-201ENST00000342988 SUFUQ9UMX1 484 aa19.54■□□□□ 0.72
SMAD4-201ENST00000342988 PPFIA4O75335 1185 aa19.54■□□□□ 0.72
SMAD4-201ENST00000342988 BCRP11274 1271 aa19.54■□□□□ 0.72
SMAD4-201ENST00000342988 CNNM4Q6P4Q7 775 aa19.54■□□□□ 0.72
SMAD4-201ENST00000342988 ZNF449Q6P9G9 518 aa19.54■□□□□ 0.72
SMAD4-201ENST00000342988 NUDCD3Q8IVD9 361 aa19.54■□□□□ 0.72
SMAD4-201ENST00000342988 PRDM11Q9NQV5 511 aa19.54■□□□□ 0.72
SMAD4-201ENST00000342988 CENPKQ9BS16 269 aa19.53■□□□□ 0.72
SMAD4-201ENST00000342988 CEP104O60308 925 aa19.53■□□□□ 0.72
SMAD4-201ENST00000342988 RAPGEF1Q13905 1077 aa19.53■□□□□ 0.72
SMAD4-201ENST00000342988 NEUROG2Q9H2A3 272 aa19.53■□□□□ 0.72
SMAD4-201ENST00000342988 NUP58Q9BVL2 599 aa19.53■□□□□ 0.72
SMAD4-201ENST00000342988 HCLS1P14317 486 aaPredicted RBP19.53■□□□□ 0.72
SMAD4-201ENST00000342988 RPAINQ86UA6 219 aa19.53■□□□□ 0.72
SMAD4-201ENST00000342988 CLSTN2Q9H4D0 955 aa19.53■□□□□ 0.72
SMAD4-201ENST00000342988 GNGT2O14610 69 aa19.53■□□□□ 0.72
SMAD4-201ENST00000342988 NUTM2AQ8IVF1 878 aaPredicted RBP19.53■□□□□ 0.72
SMAD4-201ENST00000342988 TSR2Q969E8 191 aaKnown RBP19.53■□□□□ 0.72
SMAD4-201ENST00000342988 TPCN1Q9ULQ1 816 aa19.53■□□□□ 0.72
SMAD4-201ENST00000342988 EXOC6BQ9Y2D4 811 aa19.53■□□□□ 0.72
SMAD4-201ENST00000342988 STRN3Q13033 797 aa19.53■□□□□ 0.72
SMAD4-201ENST00000342988 RSAD2Q8WXG1 361 aa19.53■□□□□ 0.72
SMAD4-201ENST00000342988 C6orf229H3BNL8 230 aa19.52■□□□□ 0.72
SMAD4-201ENST00000342988 NOP14P78316 857 aaKnown RBP19.52■□□□□ 0.72
SMAD4-201ENST00000342988 TEKT1Q969V4 418 aa19.52■□□□□ 0.72
SMAD4-201ENST00000342988 ZFXP17010 805 aaPredicted RBP19.52■□□□□ 0.72
SMAD4-201ENST00000342988 EP400NLQ6ZTU2 488 aa19.52■□□□□ 0.72
SMAD4-201ENST00000342988 AOPEPQ8N6M6 819 aa19.52■□□□□ 0.72
SMAD4-201ENST00000342988 ATP6V1AP38606 617 aa19.52■□□□□ 0.72
SMAD4-201ENST00000342988 BIRC3Q13489 604 aa19.52■□□□□ 0.72
SMAD4-201ENST00000342988 TYW1Q9NV66 732 aaKnown RBP19.52■□□□□ 0.72
SMAD4-201ENST00000342988 CFAP221Q4G0U5 840 aa19.52■□□□□ 0.72
SMAD4-201ENST00000342988 BAG2O95816 211 aa19.52■□□□□ 0.72
SMAD4-201ENST00000342988 OPTNQ96CV9 577 aa19.52■□□□□ 0.72
SMAD4-201ENST00000342988 CCDC85AQ96PX6 553 aaPredicted RBP19.52■□□□□ 0.72
SMAD4-201ENST00000342988 ALG1Q9BT22 464 aa19.52■□□□□ 0.72
SMAD4-201ENST00000342988 ANKRD35Q8N283 1001 aa19.52■□□□□ 0.71
SMAD4-201ENST00000342988 TTF2Q9UNY4 1162 aaKnown RBP19.52■□□□□ 0.71
SMAD4-201ENST00000342988 OATP04181 439 aa19.52■□□□□ 0.71
SMAD4-201ENST00000342988 NFE2L2Q16236 605 aa19.52■□□□□ 0.71
SMAD4-201ENST00000342988 ZBTB41Q5SVQ8 909 aa19.52■□□□□ 0.71
SMAD4-201ENST00000342988 ZSCAN32Q9NX65 697 aa19.52■□□□□ 0.71
SMAD4-201ENST00000342988 SLC13A4Q9UKG4 626 aa19.52■□□□□ 0.71
SMAD4-201ENST00000342988 KHDRBS2Q5VWX1 349 aaKnown RBP19.51■□□□□ 0.71
SMAD4-201ENST00000342988 DCUN1D2Q6PH85 259 aa19.51■□□□□ 0.71
SMAD4-201ENST00000342988 TTLL3Q9Y4R7 772 aa19.51■□□□□ 0.71
SMAD4-201ENST00000342988 ZSCAN22P10073 491 aaPredicted RBP19.51■□□□□ 0.71
SMAD4-201ENST00000342988 ALDH1L2Q3SY69 923 aa19.51■□□□□ 0.71
SMAD4-201ENST00000342988 SND1Q7KZF4 910 aaKnown RBP eCLIP19.51■□□□□ 0.71
SMAD4-201ENST00000342988 YWHAEP62258 255 aaKnown RBP19.51■□□□□ 0.71
SMAD4-201ENST00000342988 CCPG1Q9ULG6 757 aa19.51■□□□□ 0.71
SMAD4-201ENST00000342988 FHOD3Q2V2M9 1422 aa19.51■□□□□ 0.71
SMAD4-201ENST00000342988 PPWD1Q96BP3 646 aaKnown RBP19.51■□□□□ 0.71
SMAD4-201ENST00000342988 NBPF3Q9H094 633 aa19.51■□□□□ 0.71
SMAD4-201ENST00000342988 DKC1O60832 514 aaKnown RBP eCLIP19.51■□□□□ 0.71
SMAD4-201ENST00000342988 GTPBP10A4D1E9 387 aaKnown RBP19.5■□□□□ 0.71
SMAD4-201ENST00000342988 NPR1P16066 1061 aa19.5■□□□□ 0.71
SMAD4-201ENST00000342988 DIABLOQ9NR28 239 aa19.5■□□□□ 0.71
SMAD4-201ENST00000342988 HOMER3Q9NSC5 361 aa19.5■□□□□ 0.71
SMAD4-201ENST00000342988 BAIAP2L1Q9UHR4 511 aa19.5■□□□□ 0.71
SMAD4-201ENST00000342988 PLCG2P16885 1265 aa19.5■□□□□ 0.71
SMAD4-201ENST00000342988 STX2P32856 288 aa19.5■□□□□ 0.71
SMAD4-201ENST00000342988 TRIM75PA6NK02 468 aa19.5■□□□□ 0.71
SMAD4-201ENST00000342988 TNFAIP3P21580 790 aa19.5■□□□□ 0.71
SMAD4-201ENST00000342988 MAP7D3Q8IWC1 876 aa19.5■□□□□ 0.71
SMAD4-201ENST00000342988 TFIP11Q9UBB9 837 aaKnown RBP19.5■□□□□ 0.71
SMAD4-201ENST00000342988 TMED1Q13445 227 aa19.5■□□□□ 0.71
SMAD4-201ENST00000342988 GRK7Q8WTQ7 553 aa19.5■□□□□ 0.71
SMAD4-201ENST00000342988 GTF3C6Q969F1 213 aa19.49■□□□□ 0.71
SMAD4-201ENST00000342988 HYOU1Q9Y4L1 999 aa19.49■□□□□ 0.71
SMAD4-201ENST00000342988 RGS16O15492 202 aaPredicted RBP19.49■□□□□ 0.71
SMAD4-201ENST00000342988 OCM2P0CE71 109 aa19.49■□□□□ 0.71
SMAD4-201ENST00000342988 OCMP0CE72 109 aaPredicted RBP19.49■□□□□ 0.71
SMAD4-201ENST00000342988 GRIN1Q05586 938 aa19.49■□□□□ 0.71
SMAD4-201ENST00000342988 KCNH5Q8NCM2 988 aa19.49■□□□□ 0.71
SMAD4-201ENST00000342988 PPP2R1AP30153 589 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms