RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 TDRD3Q9H7E2 651 aaKnown RBP19.44■□□□□ 0.7
SNED1-202ENST00000342631 PCDHAC2Q9Y5I4 1007 aa19.44■□□□□ 0.7
SNED1-202ENST00000342631 SNX14Q9Y5W7 946 aa19.44■□□□□ 0.7
SNED1-202ENST00000342631 ENTPD3O75355 529 aa19.43■□□□□ 0.7
SNED1-202ENST00000342631 KIF4BQ2VIQ3 1234 aa19.43■□□□□ 0.7
SNED1-202ENST00000342631 CTR9Q6PD62 1173 aa19.43■□□□□ 0.7
SNED1-202ENST00000342631 MCM9Q9NXL9 1143 aa19.43■□□□□ 0.7
SNED1-202ENST00000342631 PALD1Q9ULE6 856 aa19.43■□□□□ 0.7
SNED1-202ENST00000342631 DDX60LQ5H9U9 1706 aaKnown RBP19.43■□□□□ 0.7
SNED1-202ENST00000342631 USP17L12C9JPN9 530 aa19.43■□□□□ 0.7
SNED1-202ENST00000342631 USP17L21D6R901 530 aa19.43■□□□□ 0.7
SNED1-202ENST00000342631 PCP11498 1178 aaKnown RBP19.43■□□□□ 0.7
SNED1-202ENST00000342631 PSMA5P28066 241 aa19.43■□□□□ 0.7
SNED1-202ENST00000342631 MAPKAPK5Q8IW41 473 aa19.43■□□□□ 0.7
SNED1-202ENST00000342631 RASEFQ8IZ41 740 aa19.43■□□□□ 0.7
SNED1-202ENST00000342631 TM6SF1Q9BZW5 370 aa19.43■□□□□ 0.7
SNED1-202ENST00000342631 ZNF70Q9UC06 446 aaPredicted RBP19.43■□□□□ 0.7
SNED1-202ENST00000342631 TAOK2Q9UL54 1235 aa19.43■□□□□ 0.7
SNED1-202ENST00000342631 COL2A1P02458 1487 aaPredicted RBP19.43■□□□□ 0.7
SNED1-202ENST00000342631 LAMB1P07942 1786 aa19.43■□□□□ 0.7
SNED1-202ENST00000342631 MYH1P12882 1939 aa19.43■□□□□ 0.7
SNED1-202ENST00000342631 SLC3A2P08195 630 aaKnown RBP19.42■□□□□ 0.7
SNED1-202ENST00000342631 PPARAQ07869 468 aa19.42■□□□□ 0.7
SNED1-202ENST00000342631 OSBPL5Q9H0X9 879 aaPredicted RBP19.42■□□□□ 0.7
SNED1-202ENST00000342631 DHX36Q9H2U1 1008 aaKnown RBP19.42■□□□□ 0.7
SNED1-202ENST00000342631 ADARB2Q9NS39 739 aaKnown RBP19.42■□□□□ 0.7
SNED1-202ENST00000342631 SHTN1A0MZ66 631 aa19.41■□□□□ 0.7
SNED1-202ENST00000342631 NT5C2P49902 561 aa19.41■□□□□ 0.7
SNED1-202ENST00000342631 RABEP1Q15276 862 aa19.41■□□□□ 0.7
SNED1-202ENST00000342631 C12orf60Q5U649 245 aa19.41■□□□□ 0.7
SNED1-202ENST00000342631 SAMD7Q7Z3H4 446 aa19.41■□□□□ 0.7
SNED1-202ENST00000342631 KIF2CQ99661 725 aa19.41■□□□□ 0.7
SNED1-202ENST00000342631 RNF41Q9H4P4 317 aaPredicted RBP19.41■□□□□ 0.7
SNED1-202ENST00000342631 SCN4AP35499 1836 aa19.41■□□□□ 0.7
SNED1-202ENST00000342631 TNFAIP1Q13829 316 aa19.41■□□□□ 0.7
SNED1-202ENST00000342631 NBPF9Q3BBW0 867 aa19.41■□□□□ 0.7
SNED1-202ENST00000342631 TTC6Q86TZ1 520 aa19.41■□□□□ 0.7
SNED1-202ENST00000342631 FAM83AQ86UY5 434 aa19.41■□□□□ 0.7
SNED1-202ENST00000342631 DDX4Q9NQI0 724 aaKnown RBP19.41■□□□□ 0.7
SNED1-202ENST00000342631 WDR90Q96KV7 1748 aa19.4■□□□□ 0.7
SNED1-202ENST00000342631 IQCA1LA6NCM1 817 aa19.4■□□□□ 0.7
SNED1-202ENST00000342631 MINDY4BA8MYZ0 360 aa19.4■□□□□ 0.7
SNED1-202ENST00000342631 POLR3DP05423 398 aaPredicted RBP19.4■□□□□ 0.7
SNED1-202ENST00000342631 HMGB1P09429 215 aaKnown RBP19.4■□□□□ 0.7
SNED1-202ENST00000342631 EPS15P42566 896 aa19.4■□□□□ 0.7
SNED1-202ENST00000342631 NFIAQ12857 509 aa19.4■□□□□ 0.7
SNED1-202ENST00000342631 PICALMQ13492 652 aa19.4■□□□□ 0.7
SNED1-202ENST00000342631 TBC1D10BQ4KMP7 808 aaPredicted RBP19.4■□□□□ 0.7
SNED1-202ENST00000342631 FAM198AQ9UFP1 575 aa19.4■□□□□ 0.7
SNED1-202ENST00000342631 HACL1Q9UJ83 578 aa19.4■□□□□ 0.7
SNED1-202ENST00000342631 UTRNP46939 3433 aa19.4■□□□□ 0.7
SNED1-202ENST00000342631 ROBO3Q96MS0 1386 aa19.4■□□□□ 0.7
SNED1-202ENST00000342631 E7EWF7 191 aa19.39■□□□□ 0.7
SNED1-202ENST00000342631 TNNI2P48788 182 aa19.39■□□□□ 0.7
SNED1-202ENST00000342631 HAND2P61296 217 aa19.39■□□□□ 0.7
SNED1-202ENST00000342631 AKNAD1Q5T1N1 836 aa19.39■□□□□ 0.7
SNED1-202ENST00000342631 RBM26Q5T8P6 1007 aaKnown RBP19.39■□□□□ 0.7
SNED1-202ENST00000342631 STAG1Q8WVM7 1258 aa19.39■□□□□ 0.7
SNED1-202ENST00000342631 CNNM2Q9H8M5 875 aa19.39■□□□□ 0.7
SNED1-202ENST00000342631 TRDNQ13061 729 aa19.39■□□□□ 0.69
SNED1-202ENST00000342631 FAM151AQ8WW52 585 aa19.39■□□□□ 0.69
SNED1-202ENST00000342631 ZNF287Q9HBT7 754 aa19.39■□□□□ 0.69
SNED1-202ENST00000342631 ATRNL1Q5VV63 1379 aa19.38■□□□□ 0.69
SNED1-202ENST00000342631 CLRN2A0PK11 232 aa19.38■□□□□ 0.69
SNED1-202ENST00000342631 HLA-DOAP06340 250 aa19.38■□□□□ 0.69
SNED1-202ENST00000342631 FGRP09769 529 aa19.38■□□□□ 0.69
SNED1-202ENST00000342631 MFSD6Q6ZSS7 791 aa19.38■□□□□ 0.69
SNED1-202ENST00000342631 USP50Q70EL3 339 aaPredicted RBP19.38■□□□□ 0.69
SNED1-202ENST00000342631 NEK1Q96PY6 1258 aa19.38■□□□□ 0.69
SNED1-202ENST00000342631 NBPF3Q9H094 633 aa19.38■□□□□ 0.69
SNED1-202ENST00000342631 RBM19Q9Y4C8 960 aaKnown RBP19.38■□□□□ 0.69
SNED1-202ENST00000342631 EGFRP00533 1210 aa19.37■□□□□ 0.69
SNED1-202ENST00000342631 CACNB3P54284 484 aa19.37■□□□□ 0.69
SNED1-202ENST00000342631 PDE4BQ07343 736 aa19.37■□□□□ 0.69
SNED1-202ENST00000342631 NCOA7Q8NI08 942 aa19.37■□□□□ 0.69
SNED1-202ENST00000342631 JAKMIP1Q96N16 626 aaKnown RBP19.37■□□□□ 0.69
SNED1-202ENST00000342631 KRT23Q9C075 422 aa19.37■□□□□ 0.69
SNED1-202ENST00000342631 VEZTQ9HBM0 779 aa19.37■□□□□ 0.69
SNED1-202ENST00000342631 ZSWIM6Q9HCJ5 1215 aa19.37■□□□□ 0.69
SNED1-202ENST00000342631 PITPNM2Q9BZ72 1349 aa19.37■□□□□ 0.69
SNED1-202ENST00000342631 ADCK5Q3MIX3 580 aa19.37■□□□□ 0.69
SNED1-202ENST00000342631 APOBEC3FQ8IUX4 373 aaKnown RBP19.37■□□□□ 0.69
SNED1-202ENST00000342631 TBC1D10CQ8IV04 446 aa19.37■□□□□ 0.69
SNED1-202ENST00000342631 TRPM4Q8TD43 1214 aa19.37■□□□□ 0.69
SNED1-202ENST00000342631 EHD4Q9H223 541 aa19.37■□□□□ 0.69
SNED1-202ENST00000342631 SAP30BPQ9UHR5 308 aaKnown RBP19.37■□□□□ 0.69
SNED1-202ENST00000342631 CTDSPL2Q05D32 466 aa19.36■□□□□ 0.69
SNED1-202ENST00000342631 TCP10Q12799 353 aa19.36■□□□□ 0.69
SNED1-202ENST00000342631 BLOC1S2Q6QNY1 142 aa19.36■□□□□ 0.69
SNED1-202ENST00000342631 RALYLQ86SE5 291 aaKnown RBP19.36■□□□□ 0.69
SNED1-202ENST00000342631 PI4KBQ9UBF8 816 aa19.36■□□□□ 0.69
SNED1-202ENST00000342631 CYP46A1Q9Y6A2 500 aa19.36■□□□□ 0.69
SNED1-202ENST00000342631 TAF6LQ9Y6J9 622 aa19.36■□□□□ 0.69
SNED1-202ENST00000342631 CYP2D7A0A087X1C5 515 aa19.35■□□□□ 0.69
SNED1-202ENST00000342631 TCP10L2B9ZVM9 353 aa19.35■□□□□ 0.69
SNED1-202ENST00000342631 CASTP20810 708 aaKnown RBP19.35■□□□□ 0.69
SNED1-202ENST00000342631 EPHX2P34913 555 aa19.35■□□□□ 0.69
SNED1-202ENST00000342631 PLCD1P51178 756 aa19.35■□□□□ 0.69
SNED1-202ENST00000342631 STOX1Q6ZVD7 989 aa19.35■□□□□ 0.69
SNED1-202ENST00000342631 ZC3H15Q8WU90 426 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms