RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 IRF6O14896 467 aa24.7■■□□□ 1.54
SYNE2-201ENST00000341472 CRHR2Q13324 411 aa24.7■■□□□ 1.54
SYNE2-201ENST00000341472 SNAPC2Q13487 334 aa24.7■■□□□ 1.54
SYNE2-201ENST00000341472 PICALMQ13492 652 aa24.7■■□□□ 1.54
SYNE2-201ENST00000341472 SH3BP5LQ7L8J4 393 aa24.7■■□□□ 1.54
SYNE2-201ENST00000341472 ZBTB40Q9NUA8 1239 aa24.7■■□□□ 1.54
SYNE2-201ENST00000341472 DBNLQ9UJU6 430 aaKnown RBP24.7■■□□□ 1.54
SYNE2-201ENST00000341472 NPM3O75607 178 aaKnown RBP24.69■■□□□ 1.54
SYNE2-201ENST00000341472 DDX4Q9NQI0 724 aaKnown RBP24.69■■□□□ 1.54
SYNE2-201ENST00000341472 HMMRO75330 724 aa24.68■■□□□ 1.54
SYNE2-201ENST00000341472 CYP2E1P05181 493 aaPredicted RBP24.68■■□□□ 1.54
SYNE2-201ENST00000341472 NAA16Q6N069 864 aaPredicted RBP24.68■■□□□ 1.54
SYNE2-201ENST00000341472 NOL10Q9BSC4 688 aaKnown RBP24.68■■□□□ 1.54
SYNE2-201ENST00000341472 ZFYVE28Q9HCC9 887 aa24.68■■□□□ 1.54
SYNE2-201ENST00000341472 DDTLA6NHG4 134 aaPredicted RBP24.67■■□□□ 1.54
SYNE2-201ENST00000341472 IGSF3O75054 1194 aa24.67■■□□□ 1.54
SYNE2-201ENST00000341472 ZAP70P43403 619 aa24.67■■□□□ 1.54
SYNE2-201ENST00000341472 MAP3K10Q02779 954 aa24.67■■□□□ 1.54
SYNE2-201ENST00000341472 NOL9Q5SY16 702 aaKnown RBP24.67■■□□□ 1.54
SYNE2-201ENST00000341472 FAM43AQ8N2R8 423 aa24.67■■□□□ 1.54
SYNE2-201ENST00000341472 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.67■■□□□ 1.54
SYNE2-201ENST00000341472 TLR7Q9NYK1 1049 aaKnown RBP24.67■■□□□ 1.54
SYNE2-201ENST00000341472 PHF20L1A8MW92 1017 aa24.66■■□□□ 1.54
SYNE2-201ENST00000341472 BAG3O95817 575 aa24.66■■□□□ 1.54
SYNE2-201ENST00000341472 PDE3AQ14432 1141 aa24.66■■□□□ 1.54
SYNE2-201ENST00000341472 TAF1CQ15572 869 aaPredicted RBP24.66■■□□□ 1.54
SYNE2-201ENST00000341472 AACSQ86V21 672 aa24.66■■□□□ 1.54
SYNE2-201ENST00000341472 SP3Q02447 781 aa24.65■■□□□ 1.54
SYNE2-201ENST00000341472 FBXO46Q6PJ61 603 aaPredicted RBP24.65■■□□□ 1.54
SYNE2-201ENST00000341472 TEX11Q8IYF3 940 aa24.65■■□□□ 1.54
SYNE2-201ENST00000341472 RHPN1Q8TCX5 695 aa24.65■■□□□ 1.54
SYNE2-201ENST00000341472 ERO1AQ96HE7 468 aa24.65■■□□□ 1.54
SYNE2-201ENST00000341472 HPS5Q9UPZ3 1129 aa24.65■■□□□ 1.54
SYNE2-201ENST00000341472 BTBD19C9JJ37 291 aa24.64■■□□□ 1.54
SYNE2-201ENST00000341472 RGS19P49795 217 aa24.64■■□□□ 1.54
SYNE2-201ENST00000341472 PPP4CP60510 307 aa24.64■■□□□ 1.54
SYNE2-201ENST00000341472 SIRT2Q8IXJ6 389 aa24.64■■□□□ 1.54
SYNE2-201ENST00000341472 IL1RAPL2Q9NP60 686 aa24.64■■□□□ 1.54
SYNE2-201ENST00000341472 ZCCHC17Q9NP64 241 aaKnown RBP24.64■■□□□ 1.54
SYNE2-201ENST00000341472 PIH1D3Q9NQM4 214 aaKnown RBP24.64■■□□□ 1.54
SYNE2-201ENST00000341472 PICK1Q9NRD5 415 aa24.64■■□□□ 1.54
SYNE2-201ENST00000341472 TRIM17Q9Y577 477 aa24.64■■□□□ 1.54
SYNE2-201ENST00000341472 RFX7Q2KHR2 1363 aa24.64■■□□□ 1.53
SYNE2-201ENST00000341472 PLCG2P16885 1265 aa24.63■■□□□ 1.53
SYNE2-201ENST00000341472 SH3RF3Q8TEJ3 882 aaPredicted RBP24.63■■□□□ 1.53
SYNE2-201ENST00000341472 KCNH4Q9UQ05 1017 aa24.63■■□□□ 1.53
SYNE2-201ENST00000341472 ATRNL1Q5VV63 1379 aa24.63■■□□□ 1.53
SYNE2-201ENST00000341472 CXCL11O14625 94 aa24.62■■□□□ 1.53
SYNE2-201ENST00000341472 TBC1D12O60347 775 aa24.62■■□□□ 1.53
SYNE2-201ENST00000341472 SCYL3Q8IZE3 742 aa24.62■■□□□ 1.53
SYNE2-201ENST00000341472 CLASRPQ8N2M8 674 aaKnown RBP24.62■■□□□ 1.53
SYNE2-201ENST00000341472 KIF1BPQ96EK5 621 aa24.62■■□□□ 1.53
SYNE2-201ENST00000341472 AATFQ9NY61 560 aaKnown RBP eCLIP24.62■■□□□ 1.53
SYNE2-201ENST00000341472 ZHX2Q9Y6X8 837 aa24.62■■□□□ 1.53
SYNE2-201ENST00000341472 APBB1O00213 710 aa24.61■■□□□ 1.53
SYNE2-201ENST00000341472 CTNND1O60716 968 aaKnown RBP24.61■■□□□ 1.53
SYNE2-201ENST00000341472 RAB11FIP3O75154 756 aa24.61■■□□□ 1.53
SYNE2-201ENST00000341472 SLURP2P0DP57 97 aa24.61■■□□□ 1.53
SYNE2-201ENST00000341472 C20orf194Q5TEA3 1177 aa24.61■■□□□ 1.53
SYNE2-201ENST00000341472 CD99L2Q8TCZ2 262 aa24.61■■□□□ 1.53
SYNE2-201ENST00000341472 OSBPL5Q9H0X9 879 aaPredicted RBP24.61■■□□□ 1.53
SYNE2-201ENST00000341472 CYP7A1P22680 504 aa24.6■■□□□ 1.53
SYNE2-201ENST00000341472 ARHGEF6Q15052 776 aa24.6■■□□□ 1.53
SYNE2-201ENST00000341472 OTOP1Q7RTM1 612 aa24.6■■□□□ 1.53
SYNE2-201ENST00000341472 EFCC1Q9HA90 598 aa24.6■■□□□ 1.53
SYNE2-201ENST00000341472 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.6■■□□□ 1.53
SYNE2-201ENST00000341472 IDH1O75874 414 aaKnown RBP24.59■■□□□ 1.53
SYNE2-201ENST00000341472 PTPRAP18433 802 aa24.59■■□□□ 1.53
SYNE2-201ENST00000341472 ANKRD23Q86SG2 305 aa24.59■■□□□ 1.53
SYNE2-201ENST00000341472 MYH13Q9UKX3 1938 aa24.59■■□□□ 1.53
SYNE2-201ENST00000341472 TLR2O60603 784 aa24.58■■□□□ 1.53
SYNE2-201ENST00000341472 IFIT2P09913 472 aaKnown RBP24.58■■□□□ 1.53
SYNE2-201ENST00000341472 MLLT1Q03111 559 aaPredicted RBP24.58■■□□□ 1.53
SYNE2-201ENST00000341472 ADGRA1Q86SQ6 560 aa24.58■■□□□ 1.53
SYNE2-201ENST00000341472 TGFBRAP1Q8WUH2 860 aa24.58■■□□□ 1.53
SYNE2-201ENST00000341472 BCL11AQ9H165 835 aa24.58■■□□□ 1.53
SYNE2-201ENST00000341472 MAP3K12Q12852 859 aa24.57■■□□□ 1.52
SYNE2-201ENST00000341472 DHX36Q9H2U1 1008 aaKnown RBP24.57■■□□□ 1.52
SYNE2-201ENST00000341472 PI4KBQ9UBF8 816 aa24.57■■□□□ 1.52
SYNE2-201ENST00000341472 NDUFB9Q9Y6M9 179 aa24.57■■□□□ 1.52
SYNE2-201ENST00000341472 PDHXO00330 501 aa24.56■■□□□ 1.52
SYNE2-201ENST00000341472 SOX10P56693 466 aa24.56■■□□□ 1.52
SYNE2-201ENST00000341472 FASTKD5Q7L8L6 764 aaKnown RBP24.56■■□□□ 1.52
SYNE2-201ENST00000341472 ANTXR1Q9H6X2 564 aa24.56■■□□□ 1.52
SYNE2-201ENST00000341472 AFG3L2Q9Y4W6 797 aa24.56■■□□□ 1.52
SYNE2-201ENST00000341472 MOGSQ13724 837 aa24.55■■□□□ 1.52
SYNE2-201ENST00000341472 TMED8Q6PL24 325 aaPredicted RBP24.55■■□□□ 1.52
SYNE2-201ENST00000341472 MAPKAPK5Q8IW41 473 aa24.55■■□□□ 1.52
SYNE2-201ENST00000341472 MAGEB6Q8N7X4 407 aa24.55■■□□□ 1.52
SYNE2-201ENST00000341472 PTPN22Q9Y2R2 807 aa24.55■■□□□ 1.52
SYNE2-201ENST00000341472 MYH2Q9UKX2 1941 aa24.55■■□□□ 1.52
SYNE2-201ENST00000341472 FAM196BA6NMK8 535 aa24.54■■□□□ 1.52
SYNE2-201ENST00000341472 DYNLL1P63167 89 aaKnown RBP24.54■■□□□ 1.52
SYNE2-201ENST00000341472 FOXP4Q8IVH2 680 aaPredicted RBP24.54■■□□□ 1.52
SYNE2-201ENST00000341472 HERC5Q9UII4 1024 aaKnown RBP24.54■■□□□ 1.52
SYNE2-201ENST00000341472 KIF22Q14807 665 aa24.53■■□□□ 1.52
SYNE2-201ENST00000341472 TTF1Q15361 905 aaPredicted RBP24.53■■□□□ 1.52
SYNE2-201ENST00000341472 GPAT2Q6NUI2 795 aa24.53■■□□□ 1.52
SYNE2-201ENST00000341472 CERS3Q8IU89 383 aa24.53■■□□□ 1.52
SYNE2-201ENST00000341472 OTOFQ9HC10 1997 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms