RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 KCNQ3O43525 872 aa19.38■□□□□ 0.69
CDK11B-201ENST00000340677 KIF5CO60282 957 aa19.38■□□□□ 0.69
CDK11B-201ENST00000340677 CCT4P50991 539 aaKnown RBP19.38■□□□□ 0.69
CDK11B-201ENST00000340677 FLIIQ13045 1269 aa19.38■□□□□ 0.69
CDK11B-201ENST00000340677 FAM81AQ8TBF8 368 aa19.38■□□□□ 0.69
CDK11B-201ENST00000340677 ITGB4P16144 1822 aa19.37■□□□□ 0.69
CDK11B-201ENST00000340677 SFSWAPQ12872 951 aaKnown RBP19.37■□□□□ 0.69
CDK11B-201ENST00000340677 EPAS1Q99814 870 aa19.37■□□□□ 0.69
CDK11B-201ENST00000340677 LIG3P49916 1009 aa19.36■□□□□ 0.69
CDK11B-201ENST00000340677 DEUP1Q05D60 604 aa19.36■□□□□ 0.69
CDK11B-201ENST00000340677 SMC1AQ14683 1233 aaKnown RBP19.36■□□□□ 0.69
CDK11B-201ENST00000340677 CCDC70Q6NSX1 233 aa19.36■□□□□ 0.69
CDK11B-201ENST00000340677 NSFL1CQ9UNZ2 370 aaKnown RBP19.36■□□□□ 0.69
CDK11B-201ENST00000340677 EXOC5O00471 708 aa19.36■□□□□ 0.69
CDK11B-201ENST00000340677 MYO1BO43795 1136 aa19.36■□□□□ 0.69
CDK11B-201ENST00000340677 SCNN1BP51168 640 aa19.36■□□□□ 0.69
CDK11B-201ENST00000340677 CABP4P57796 275 aa19.36■□□□□ 0.69
CDK11B-201ENST00000340677 ZFYVE27Q5T4F4 411 aa19.36■□□□□ 0.69
CDK11B-201ENST00000340677 TTC30BQ8N4P2 665 aa19.36■□□□□ 0.69
CDK11B-201ENST00000340677 TRIML1Q8N9V2 468 aa19.36■□□□□ 0.69
CDK11B-201ENST00000340677 TRIM11Q96F44 468 aa19.36■□□□□ 0.69
CDK11B-201ENST00000340677 N6AMT1Q9Y5N5 214 aa19.36■□□□□ 0.69
CDK11B-201ENST00000340677 TNS2Q63HR2 1409 aa19.36■□□□□ 0.69
CDK11B-201ENST00000340677 CCDC175P0C221 793 aa19.35■□□□□ 0.69
CDK11B-201ENST00000340677 G2E3Q7L622 706 aa19.35■□□□□ 0.69
CDK11B-201ENST00000340677 SPDYE3A6NKU9 549 aa19.35■□□□□ 0.69
CDK11B-201ENST00000340677 ZNF189O75820 626 aaPredicted RBP19.35■□□□□ 0.69
CDK11B-201ENST00000340677 CEP135Q66GS9 1140 aa19.35■□□□□ 0.69
CDK11B-201ENST00000340677 CD248Q9HCU0 757 aa19.35■□□□□ 0.69
CDK11B-201ENST00000340677 DBF4Q9UBU7 674 aaPredicted RBP19.35■□□□□ 0.69
CDK11B-201ENST00000340677 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.34■□□□□ 0.69
CDK11B-201ENST00000340677 STIP1P31948 543 aaKnown RBP19.34■□□□□ 0.69
CDK11B-201ENST00000340677 TMCO3Q6UWJ1 677 aa19.34■□□□□ 0.69
CDK11B-201ENST00000340677 NYAP1Q6ZVC0 841 aa19.34■□□□□ 0.69
CDK11B-201ENST00000340677 HOMER3Q9NSC5 361 aa19.34■□□□□ 0.69
CDK11B-201ENST00000340677 SPATA31A6Q5VVP1 1343 aa19.34■□□□□ 0.69
CDK11B-201ENST00000340677 CDR1P51861 262 aa19.34■□□□□ 0.69
CDK11B-201ENST00000340677 THEMIS2Q5TEJ8 643 aa19.34■□□□□ 0.69
CDK11B-201ENST00000340677 GPBP1L1Q9HC44 474 aaPredicted RBP19.34■□□□□ 0.69
CDK11B-201ENST00000340677 RGL1Q9NZL6 768 aa19.34■□□□□ 0.69
CDK11B-201ENST00000340677 SLU7O95391 586 aaKnown RBP19.33■□□□□ 0.69
CDK11B-201ENST00000340677 KCNB1Q14721 858 aa19.33■□□□□ 0.69
CDK11B-201ENST00000340677 WLSQ5T9L3 541 aa19.33■□□□□ 0.69
CDK11B-201ENST00000340677 WDR78Q5VTH9 848 aa19.33■□□□□ 0.69
CDK11B-201ENST00000340677 KIRREL3Q8IZU9 778 aa19.33■□□□□ 0.69
CDK11B-201ENST00000340677 SPDL1Q96EA4 605 aa19.33■□□□□ 0.69
CDK11B-201ENST00000340677 SPATA31A1Q5TZJ5 1347 aa19.33■□□□□ 0.69
CDK11B-201ENST00000340677 CHUKO15111 745 aa19.33■□□□□ 0.68
CDK11B-201ENST00000340677 NBPF7P0C2Y1 421 aaPredicted RBP19.33■□□□□ 0.68
CDK11B-201ENST00000340677 SESN3P58005 492 aa19.33■□□□□ 0.68
CDK11B-201ENST00000340677 KRT38O76015 456 aa19.32■□□□□ 0.68
CDK11B-201ENST00000340677 ATP2B2Q01814 1243 aa19.32■□□□□ 0.68
CDK11B-201ENST00000340677 ERCC6LQ2NKX8 1250 aa19.32■□□□□ 0.68
CDK11B-201ENST00000340677 TCP11Q8WWU5 503 aa19.32■□□□□ 0.68
CDK11B-201ENST00000340677 DDX11Q96FC9 970 aa19.32■□□□□ 0.68
CDK11B-201ENST00000340677 TTC5Q8N0Z6 440 aa19.32■□□□□ 0.68
CDK11B-201ENST00000340677 FAM107BQ9H098 131 aa19.32■□□□□ 0.68
CDK11B-201ENST00000340677 ATP8B1O43520 1251 aa19.31■□□□□ 0.68
CDK11B-201ENST00000340677 DHX8Q14562 1220 aaKnown RBP19.31■□□□□ 0.68
CDK11B-201ENST00000340677 KCPQ6ZWJ8 1503 aa19.31■□□□□ 0.68
CDK11B-201ENST00000340677 HYPKQ9NX55 129 aa19.31■□□□□ 0.68
CDK11B-201ENST00000340677 ATP10DQ9P241 1426 aa19.31■□□□□ 0.68
CDK11B-201ENST00000340677 LMNB1P20700 586 aa19.31■□□□□ 0.68
CDK11B-201ENST00000340677 CABS1Q96KC9 395 aa19.31■□□□□ 0.68
CDK11B-201ENST00000340677 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.31■□□□□ 0.687e-7■■■□□ 17.4
CDK11B-201ENST00000340677 SPATA31A5Q5VU36 1347 aa19.3■□□□□ 0.68
CDK11B-201ENST00000340677 SPATA31A7Q8IWB4 1347 aa19.3■□□□□ 0.68
CDK11B-201ENST00000340677 SNRPA1P09661 255 aaKnown RBP19.3■□□□□ 0.68
CDK11B-201ENST00000340677 HOXA10P31260 410 aaPredicted RBP19.3■□□□□ 0.68
CDK11B-201ENST00000340677 BARGINQ6ZT62 677 aa19.3■□□□□ 0.68
CDK11B-201ENST00000340677 KIAA1328Q86T90 577 aa19.3■□□□□ 0.68
CDK11B-201ENST00000340677 OR8K1Q8NGG5 319 aa19.3■□□□□ 0.68
CDK11B-201ENST00000340677 CCDC114Q96M63 670 aa19.3■□□□□ 0.68
CDK11B-201ENST00000340677 SCLT1Q96NL6 688 aa19.3■□□□□ 0.68
CDK11B-201ENST00000340677 PARD6BQ9BYG5 372 aa19.3■□□□□ 0.68
CDK11B-201ENST00000340677 SASH3O75995 380 aa19.3■□□□□ 0.68
CDK11B-201ENST00000340677 ADAMTS2O95450 1211 aa19.3■□□□□ 0.68
CDK11B-201ENST00000340677 TMC6Q7Z403 805 aa19.3■□□□□ 0.68
CDK11B-201ENST00000340677 DDX21Q9NR30 783 aaKnown RBP eCLIP19.3■□□□□ 0.68
CDK11B-201ENST00000340677 CHPF2Q9P2E5 772 aa19.3■□□□□ 0.68
CDK11B-201ENST00000340677 EIF2S2P20042 333 aaKnown RBP19.29■□□□□ 0.68
CDK11B-201ENST00000340677 NAA25Q14CX7 972 aa19.29■□□□□ 0.68
CDK11B-201ENST00000340677 CENPOQ9BU64 300 aa19.29■□□□□ 0.68
CDK11B-201ENST00000340677 ARHGAP22Q7Z5H3 698 aa19.29■□□□□ 0.68
CDK11B-201ENST00000340677 HDAC6Q9UBN7 1215 aa19.29■□□□□ 0.68
CDK11B-201ENST00000340677 FILIP1LQ4L180 1135 aa19.28■□□□□ 0.68
CDK11B-201ENST00000340677 CLEC4GQ6UXB4 293 aa19.28■□□□□ 0.68
CDK11B-201ENST00000340677 ZNF496Q96IT1 587 aaPredicted RBP19.28■□□□□ 0.68
CDK11B-201ENST00000340677 E2F6O75461 281 aa19.28■□□□□ 0.68
CDK11B-201ENST00000340677 SLC39A6Q13433 755 aa19.28■□□□□ 0.68
CDK11B-201ENST00000340677 TPD52L1Q16890 204 aaPredicted RBP19.28■□□□□ 0.68
CDK11B-201ENST00000340677 NBPF15Q8N660 670 aa19.28■□□□□ 0.68
CDK11B-201ENST00000340677 SYAP1Q96A49 352 aaPredicted RBP19.28■□□□□ 0.68
CDK11B-201ENST00000340677 DNAAF2Q9NVR5 837 aaKnown RBP19.28■□□□□ 0.68
CDK11B-201ENST00000340677 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.28■□□□□ 0.68
CDK11B-201ENST00000340677 ERC2O15083 957 aa19.27■□□□□ 0.68
CDK11B-201ENST00000340677 OPA1O60313 960 aa19.27■□□□□ 0.68
CDK11B-201ENST00000340677 MYCLP1P12525 358 aaPredicted RBP19.27■□□□□ 0.68
CDK11B-201ENST00000340677 FAM114A1Q8IWE2 563 aa19.27■□□□□ 0.68
CDK11B-201ENST00000340677 RPAP2Q8IXW5 612 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms