RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 SEC31BQ9NQW1 1179 aa13.78□□□□□ -0.2
CCDC144CP-201ENST00000340196 PCDHA5Q9Y5H7 936 aa13.78□□□□□ -0.2
CCDC144CP-201ENST00000340196 VWA3AA6NCI4 1184 aa13.77□□□□□ -0.2
CCDC144CP-201ENST00000340196 RANBP6O60518 1105 aaKnown RBP13.77□□□□□ -0.2
CCDC144CP-201ENST00000340196 CMA1P23946 247 aa13.77□□□□□ -0.2
CCDC144CP-201ENST00000340196 IRX3P78415 501 aaPredicted RBP13.77□□□□□ -0.2
CCDC144CP-201ENST00000340196 FMR1Q06787 632 aaKnown RBP eCLIP13.77□□□□□ -0.2
CCDC144CP-201ENST00000340196 ATL3Q6DD88 541 aa13.77□□□□□ -0.2
CCDC144CP-201ENST00000340196 PARP3Q9Y6F1 533 aa13.77□□□□□ -0.2
CCDC144CP-201ENST00000340196 UBR2Q8IWV8 1755 aa13.77□□□□□ -0.2
CCDC144CP-201ENST00000340196 PSDA5PKW4 1024 aaPredicted RBP13.77□□□□□ -0.21
CCDC144CP-201ENST00000340196 CASP1P29466 404 aa13.77□□□□□ -0.21
CCDC144CP-201ENST00000340196 SLC39A14Q15043 492 aa13.77□□□□□ -0.21
CCDC144CP-201ENST00000340196 NCOA7Q8NI08 942 aa13.77□□□□□ -0.21
CCDC144CP-201ENST00000340196 UBXN4Q92575 508 aa13.77□□□□□ -0.21
CCDC144CP-201ENST00000340196 ZKSCAN3Q9BRR0 538 aa13.77□□□□□ -0.21
CCDC144CP-201ENST00000340196 NOL10Q9BSC4 688 aaKnown RBP13.77□□□□□ -0.21
CCDC144CP-201ENST00000340196 FBXO3Q9UK99 471 aa13.77□□□□□ -0.21
CCDC144CP-201ENST00000340196 KCNJ14Q9UNX9 436 aa13.77□□□□□ -0.21
CCDC144CP-201ENST00000340196 GLI3P10071 1580 aa13.77□□□□□ -0.21
CCDC144CP-201ENST00000340196 IDH1O75874 414 aaKnown RBP13.77□□□□□ -0.21
CCDC144CP-201ENST00000340196 MCAMP43121 646 aa13.77□□□□□ -0.21
CCDC144CP-201ENST00000340196 METAP2P50579 478 aaKnown RBP eCLIP13.77□□□□□ -0.21
CCDC144CP-201ENST00000340196 PTPAQ15257 358 aa13.77□□□□□ -0.21
CCDC144CP-201ENST00000340196 TMEM139Q8IV31 216 aa13.77□□□□□ -0.21
CCDC144CP-201ENST00000340196 TEX2Q8IWB9 1127 aa13.77□□□□□ -0.21
CCDC144CP-201ENST00000340196 RGS22Q8NE09 1264 aa13.77□□□□□ -0.21
CCDC144CP-201ENST00000340196 MNS1Q8NEH6 495 aa13.77□□□□□ -0.21
CCDC144CP-201ENST00000340196 PAPPAQ13219 1627 aa13.76□□□□□ -0.21
CCDC144CP-201ENST00000340196 TOP1P11387 765 aaKnown RBP13.76□□□□□ -0.21
CCDC144CP-201ENST00000340196 GPTP24298 496 aa13.76□□□□□ -0.21
CCDC144CP-201ENST00000340196 EVCP57679 992 aa13.76□□□□□ -0.21
CCDC144CP-201ENST00000340196 ST5P78524 1137 aa13.76□□□□□ -0.21
CCDC144CP-201ENST00000340196 MYL5Q02045 173 aa13.76□□□□□ -0.21
CCDC144CP-201ENST00000340196 TEX35Q5T0J7 233 aa13.76□□□□□ -0.21
CCDC144CP-201ENST00000340196 USP49Q70CQ1 688 aa13.76□□□□□ -0.21
CCDC144CP-201ENST00000340196 BPIFA3Q9BQP9 254 aa13.76□□□□□ -0.21
CCDC144CP-201ENST00000340196 NRAPQ86VF7 1730 aa13.76□□□□□ -0.21
CCDC144CP-201ENST00000340196 CCDC57Q2TAC2 916 aa13.76□□□□□ -0.21
CCDC144CP-201ENST00000340196 CCDC158Q5M9N0 1113 aa13.76□□□□□ -0.21
CCDC144CP-201ENST00000340196 WNK3Q9BYP7 1800 aa13.75□□□□□ -0.21
CCDC144CP-201ENST00000340196 CAPN2P17655 700 aa13.75□□□□□ -0.21
CCDC144CP-201ENST00000340196 GNG11P61952 73 aa13.75□□□□□ -0.21
CCDC144CP-201ENST00000340196 SLC9C2Q5TAH2 1124 aa13.75□□□□□ -0.21
CCDC144CP-201ENST00000340196 BRAPQ7Z569 592 aa13.75□□□□□ -0.21
CCDC144CP-201ENST00000340196 HELBQ8NG08 1087 aaPredicted RBP13.75□□□□□ -0.21
CCDC144CP-201ENST00000340196 KCND1Q9NSA2 647 aa13.75□□□□□ -0.21
CCDC144CP-201ENST00000340196 TACC3Q9Y6A5 838 aa13.75□□□□□ -0.21
CCDC144CP-201ENST00000340196 TADA3O75528 432 aa13.75□□□□□ -0.21
CCDC144CP-201ENST00000340196 CHRM1P11229 460 aaPredicted RBP13.75□□□□□ -0.21
CCDC144CP-201ENST00000340196 TPM4P67936 248 aa13.75□□□□□ -0.21
CCDC144CP-201ENST00000340196 CTDSPL2Q05D32 466 aa13.75□□□□□ -0.21
CCDC144CP-201ENST00000340196 VSTM4Q8IW00 320 aa13.75□□□□□ -0.21
CCDC144CP-201ENST00000340196 CNNM3Q8NE01 707 aa13.75□□□□□ -0.21
CCDC144CP-201ENST00000340196 MED15Q96RN5 788 aa13.75□□□□□ -0.21
CCDC144CP-201ENST00000340196 MAP3K14Q99558 947 aa13.75□□□□□ -0.21
CCDC144CP-201ENST00000340196 TUBE1Q9UJT0 475 aa13.75□□□□□ -0.21
CCDC144CP-201ENST00000340196 PPP2R2CQ9Y2T4 447 aa13.75□□□□□ -0.21
CCDC144CP-201ENST00000340196 BTBD18B2RXH4 712 aa13.74□□□□□ -0.21
CCDC144CP-201ENST00000340196 SMIM22K7EJ46 135 aa13.74□□□□□ -0.21
CCDC144CP-201ENST00000340196 APOA5Q6Q788 366 aa13.74□□□□□ -0.21
CCDC144CP-201ENST00000340196 NFXL1Q6ZNB6 911 aa13.74□□□□□ -0.21
CCDC144CP-201ENST00000340196 SLC26A6Q9BXS9 759 aa13.74□□□□□ -0.21
CCDC144CP-201ENST00000340196 PIH1D3Q9NQM4 214 aaKnown RBP13.74□□□□□ -0.21
CCDC144CP-201ENST00000340196 SAMSN1Q9NSI8 373 aaKnown RBP13.74□□□□□ -0.21
CCDC144CP-201ENST00000340196 HPSEQ9Y251 543 aa13.74□□□□□ -0.21
CCDC144CP-201ENST00000340196 LAMB4A4D0S4 1761 aa13.74□□□□□ -0.21
CCDC144CP-201ENST00000340196 TOGARAM1Q9Y4F4 1720 aa13.74□□□□□ -0.21
CCDC144CP-201ENST00000340196 SLC20A2Q08357 652 aa13.74□□□□□ -0.21
CCDC144CP-201ENST00000340196 BMS1Q14692 1282 aaKnown RBP13.74□□□□□ -0.21
CCDC144CP-201ENST00000340196 CPLX3Q8WVH0 158 aa13.74□□□□□ -0.21
CCDC144CP-201ENST00000340196 APPBP2Q92624 585 aa13.74□□□□□ -0.21
CCDC144CP-201ENST00000340196 WWC3Q9ULE0 1092 aa13.74□□□□□ -0.21
CCDC144CP-201ENST00000340196 KIF2AO00139 706 aaPredicted RBP13.73□□□□□ -0.21
CCDC144CP-201ENST00000340196 DHX16O60231 1041 aaKnown RBP13.73□□□□□ -0.21
CCDC144CP-201ENST00000340196 ZRANB2O95218 330 aaKnown RBP eCLIP13.73□□□□□ -0.21
CCDC144CP-201ENST00000340196 NR5A1Q13285 461 aa13.73□□□□□ -0.21
CCDC144CP-201ENST00000340196 TMCO3Q6UWJ1 677 aa13.73□□□□□ -0.21
CCDC144CP-201ENST00000340196 FAM217BQ9NTX9 383 aaPredicted RBP13.73□□□□□ -0.21
CCDC144CP-201ENST00000340196 KCNH3Q9ULD8 1083 aa13.73□□□□□ -0.21
CCDC144CP-201ENST00000340196 ANGEL1Q9UNK9 670 aaKnown RBP13.73□□□□□ -0.21
CCDC144CP-201ENST00000340196 UBN2Q6ZU65 1347 aa13.73□□□□□ -0.21
CCDC144CP-201ENST00000340196 hCG_1642624A0A1W2PR95 340 aa13.73□□□□□ -0.21
CCDC144CP-201ENST00000340196 FAM205CA6NFA0 338 aa13.73□□□□□ -0.21
CCDC144CP-201ENST00000340196 STX17P56962 302 aa13.73□□□□□ -0.21
CCDC144CP-201ENST00000340196 RRP12Q5JTH9 1297 aaKnown RBP13.73□□□□□ -0.21
CCDC144CP-201ENST00000340196 MRPL44Q9H9J2 332 aaKnown RBP13.73□□□□□ -0.21
CCDC144CP-201ENST00000340196 IKBKBO14920 756 aa13.72□□□□□ -0.21
CCDC144CP-201ENST00000340196 KRBA2Q6ZNG9 492 aa13.72□□□□□ -0.21
CCDC144CP-201ENST00000340196 SMYD4Q8IYR2 804 aaPredicted RBP13.72□□□□□ -0.21
CCDC144CP-201ENST00000340196 DHX58Q96C10 678 aa13.72□□□□□ -0.21
CCDC144CP-201ENST00000340196 TIGD1Q96MW7 591 aa13.72□□□□□ -0.21
CCDC144CP-201ENST00000340196 LZTFL1Q9NQ48 299 aa13.72□□□□□ -0.21
CCDC144CP-201ENST00000340196 NFE2L3Q9Y4A8 694 aa13.72□□□□□ -0.21
CCDC144CP-201ENST00000340196 TNS2Q63HR2 1409 aa13.72□□□□□ -0.21
CCDC144CP-201ENST00000340196 SOWAHDA6NJG2 315 aa13.72□□□□□ -0.21
CCDC144CP-201ENST00000340196 SH2B2O14492 632 aaPredicted RBP13.72□□□□□ -0.21
CCDC144CP-201ENST00000340196 POLR2DO15514 142 aaKnown RBP13.72□□□□□ -0.21
CCDC144CP-201ENST00000340196 HNRNPH2P55795 449 aaKnown RBP13.72□□□□□ -0.21
CCDC144CP-201ENST00000340196 RESP18Q5W5W9 173 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms