RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 DCP1AQ9NPI6 582 aaPredicted RBP8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 CPLX1O14810 134 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 RANBP6O60518 1105 aaKnown RBP8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 GNAT2P19087 354 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 GUCY1A2P33402 732 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 METAP2P50579 478 aaKnown RBP eCLIP8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 UBE2HP62256 183 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 EZH2Q15910 746 aaKnown RBP8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 L1TD1Q5T7N2 865 aaKnown RBP8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 TBC1D16Q8TBP0 767 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 LEO1Q8WVC0 666 aaPredicted RBP8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 RBM17Q96I25 401 aaKnown RBP8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 ZNF219Q9P2Y4 722 aaPredicted RBP8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 LEMD3Q9Y2U8 911 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 MBD3O95983 291 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 KRT85P78386 507 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 NTRK3Q16288 839 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 CAMK4Q16566 473 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 FAM47AQ5JRC9 791 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 GIMAP6Q6P9H5 292 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 DZIP1Q86YF9 867 aaKnown RBP8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 SH3RF3Q8TEJ3 882 aaPredicted RBP8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 GGA1Q9UJY5 639 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 BAZ2BQ9UIF8 2168 aaKnown RBP8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 KLRG2A4D1S0 409 aaPredicted RBP8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 KIF28PB7ZC32 967 aa8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 SEMA3EO15041 775 aa8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 LDHBP07195 334 aaKnown RBP8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 SRGNP10124 158 aa8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 HOXA10P31260 410 aaPredicted RBP8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 HMGN5P82970 282 aaKnown RBP8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 SPATA32Q96LK8 384 aa8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 USP28Q96RU2 1077 aa8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 KCNQ5Q9NR82 932 aa8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 ZMYM6O95789 1325 aa8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 hCG_1642624A0A1W2PR95 340 aa8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 ZBTB43O43298 467 aa8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 BBOX1O75936 387 aa8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 NUP133Q8WUM0 1156 aa8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 DYNLL2Q96FJ2 89 aa8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 TMEM87BQ96K49 555 aa8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 SLC12A7Q9Y666 1083 aa8.66□□□□□ -1.02
SRFBP1-201ENST00000339397 F8W031 263 aaPredicted RBP8.65□□□□□ -1.02
SRFBP1-201ENST00000339397 DOK7Q18PE1 504 aa8.65□□□□□ -1.02
SRFBP1-201ENST00000339397 LRSAM1Q6UWE0 723 aa8.65□□□□□ -1.02
SRFBP1-201ENST00000339397 SGMS1Q86VZ5 419 aa8.65□□□□□ -1.02
SRFBP1-201ENST00000339397 NLGN1Q8N2Q7 840 aa8.65□□□□□ -1.02
SRFBP1-201ENST00000339397 FBXO18Q8NFZ0 1043 aa8.65□□□□□ -1.02
SRFBP1-201ENST00000339397 TGFBRAP1Q8WUH2 860 aa8.65□□□□□ -1.02
SRFBP1-201ENST00000339397 MCM9Q9NXL9 1143 aa8.65□□□□□ -1.02
SRFBP1-201ENST00000339397 CCDC69A6NI79 296 aa8.65□□□□□ -1.03
SRFBP1-201ENST00000339397 GOLGA8AA7E2F4 631 aa8.65□□□□□ -1.03
SRFBP1-201ENST00000339397 LIFRP42702 1097 aa8.65□□□□□ -1.03
SRFBP1-201ENST00000339397 NASPP49321 788 aaPredicted RBP8.65□□□□□ -1.03
SRFBP1-201ENST00000339397 ZNF804AQ7Z570 1209 aa8.65□□□□□ -1.03
SRFBP1-201ENST00000339397 ENAHQ8N8S7 591 aaPredicted RBP8.65□□□□□ -1.03
SRFBP1-201ENST00000339397 SLC44A5Q8NCS7 719 aa8.65□□□□□ -1.03
SRFBP1-201ENST00000339397 C8orf76Q96K31 380 aa8.65□□□□□ -1.03
SRFBP1-201ENST00000339397 KRT23Q9C075 422 aa8.65□□□□□ -1.03
SRFBP1-201ENST00000339397 MYH2Q9UKX2 1941 aa8.65□□□□□ -1.03
SRFBP1-201ENST00000339397 TNKSO95271 1327 aa8.65□□□□□ -1.03
SRFBP1-201ENST00000339397 WDR19Q8NEZ3 1342 aa8.65□□□□□ -1.03
SRFBP1-201ENST00000339397 PPEF1O14829 653 aaPredicted RBP8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 NR1I2O75469 434 aa8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 CHRNA5P30532 468 aa8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 PLCD1P51178 756 aa8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 GTF2IP78347 998 aa8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 WTAPQ15007 396 aa8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 SEC23AQ15436 765 aa8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 MFSD14BQ5SR56 506 aa8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 ZNF622Q969S3 477 aaKnown RBP eCLIP8.64□□□□□ -1.033e-8■□□□□ 10.7
SRFBP1-201ENST00000339397 BRIP1Q9BX63 1249 aa8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 CNNM2Q9H8M5 875 aa8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 MKRN1Q9UHC7 482 aaKnown RBP8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 SAP30BPQ9UHR5 308 aaKnown RBP8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 ANAPC4Q9UJX5 808 aa8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 WDR66Q8TBY9 1149 aa8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 FBXW7Q969H0 707 aa8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 CRAMP1Q96RY5 1269 aa8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 ALG1Q9BT22 464 aa8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 SLC26A6Q9BXS9 759 aa8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 DACT1Q9NYF0 836 aa8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 CLIC4Q9Y696 253 aa8.64□□□□□ -1.03
SRFBP1-201ENST00000339397 DHX16O60231 1041 aaKnown RBP8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 SLURP2P0DP57 97 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 VEGFAP15692 232 aaPredicted RBP8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 ATP2B4P23634 1241 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 DEFB132Q7Z7B7 95 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 MAPKAPK5Q8IW41 473 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 UBAC1Q9BSL1 405 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 CRNKL1Q9BZJ0 848 aaKnown RBP8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 SCAND2PQ9GZW5 306 aaPredicted RBP8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 ZSCAN16Q9H4T2 348 aaPredicted RBP8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 CHD4Q14839 1912 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 IL1R1P14778 569 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 CKAP2LQ8IYA6 745 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 ZNF654Q8IZM8 581 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 CERS5Q8N5B7 392 aa8.63□□□□□ -1.03
SRFBP1-201ENST00000339397 ESR2Q92731 530 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms