RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 GOLGA8AA7E2F4 631 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 CUTAO60888 179 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 IGSF3O75054 1194 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 ZNF202O95125 648 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 MBD4O95243 580 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 APPP05067 770 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 KCNJ6P48051 423 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 SART3Q15020 963 aaKnown RBP12.45□□□□□ -0.42
CCDC172-201ENST00000333254 SYCP1Q15431 976 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 DDB1Q16531 1140 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 TMEM67Q5HYA8 995 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 MAGEB6Q8N7X4 407 aa12.45□□□□□ -0.42
CCDC172-201ENST00000333254 OSBPL5Q9H0X9 879 aaPredicted RBP12.45□□□□□ -0.42
CCDC172-201ENST00000333254 PDS5AQ29RF7 1337 aaKnown RBP12.44□□□□□ -0.42
CCDC172-201ENST00000333254 LOC102724428A0A0B4J2F2 783 aa12.44□□□□□ -0.42
CCDC172-201ENST00000333254 CCDC196A0A1B0GTZ2 297 aa12.44□□□□□ -0.42
CCDC172-201ENST00000333254 A0A1B0GVL5 298 aa12.44□□□□□ -0.42
CCDC172-201ENST00000333254 SMTNL1A8MU46 457 aa12.44□□□□□ -0.42
CCDC172-201ENST00000333254 POLR3DP05423 398 aaPredicted RBP12.44□□□□□ -0.42
CCDC172-201ENST00000333254 SLC3A2P08195 630 aaKnown RBP12.44□□□□□ -0.42
CCDC172-201ENST00000333254 PCP11498 1178 aaKnown RBP12.44□□□□□ -0.42
CCDC172-201ENST00000333254 CDC27P30260 824 aa12.44□□□□□ -0.42
CCDC172-201ENST00000333254 SIK1P57059 783 aa12.44□□□□□ -0.42
CCDC172-201ENST00000333254 TRIM29Q14134 588 aa12.44□□□□□ -0.42
CCDC172-201ENST00000333254 OTUD7BQ6GQQ9 843 aa12.44□□□□□ -0.42
CCDC172-201ENST00000333254 MFSD6Q6ZSS7 791 aa12.44□□□□□ -0.42
CCDC172-201ENST00000333254 MPNDQ8N594 471 aa12.44□□□□□ -0.42
CCDC172-201ENST00000333254 CACTINQ8WUQ7 758 aaKnown RBP12.44□□□□□ -0.42
CCDC172-201ENST00000333254 MAP3K14Q99558 947 aa12.44□□□□□ -0.42
CCDC172-201ENST00000333254 SLC12A7Q9Y666 1083 aa12.44□□□□□ -0.42
CCDC172-201ENST00000333254 CCDC69A6NI79 296 aa12.43□□□□□ -0.42
CCDC172-201ENST00000333254 PFKFB1P16118 471 aa12.43□□□□□ -0.42
CCDC172-201ENST00000333254 ATP6V1AP38606 617 aa12.43□□□□□ -0.42
CCDC172-201ENST00000333254 TPM4P67936 248 aa12.43□□□□□ -0.42
CCDC172-201ENST00000333254 SSRP1Q08945 709 aaKnown RBP12.43□□□□□ -0.42
CCDC172-201ENST00000333254 UBE4AQ14139 1066 aa12.43□□□□□ -0.42
CCDC172-201ENST00000333254 SF3B3Q15393 1217 aaKnown RBP12.43□□□□□ -0.42
CCDC172-201ENST00000333254 ZRSR1Q15695 479 aaKnown RBP12.43□□□□□ -0.42
CCDC172-201ENST00000333254 RESP18Q5W5W9 173 aa12.43□□□□□ -0.42
CCDC172-201ENST00000333254 LRRC8AQ8IWT6 810 aa12.43□□□□□ -0.42
CCDC172-201ENST00000333254 C17orf53Q8N3J3 647 aaPredicted RBP12.43□□□□□ -0.42
CCDC172-201ENST00000333254 UBE2Q2Q8WVN8 375 aa12.43□□□□□ -0.42
CCDC172-201ENST00000333254 SYTL4Q96C24 671 aaPredicted RBP12.43□□□□□ -0.42
CCDC172-201ENST00000333254 MROH7-TTC4A0A0A0MT08 1334 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 IFIT3O14879 490 aaKnown RBP12.42□□□□□ -0.42
CCDC172-201ENST00000333254 CTIFO43310 598 aaKnown RBP12.42□□□□□ -0.42
CCDC172-201ENST00000333254 RANBP6O60518 1105 aaKnown RBP12.42□□□□□ -0.42
CCDC172-201ENST00000333254 NT5C2P49902 561 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 CCDC144BQ3MJ40 725 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 SPATA31A5Q5VU36 1347 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 SPATA31A7Q8IWB4 1347 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 CCDC144CPQ8IYA2 1237 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 LTBP4Q8N2S1 1624 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 AOPEPQ8N6M6 819 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.42□□□□□ -0.42
CCDC172-201ENST00000333254 FOXP1Q9H334 677 aaPredicted RBP12.42□□□□□ -0.42
CCDC172-201ENST00000333254 ZSWIM5Q9P217 1185 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 BAZ2AQ9UIF9 1905 aaKnown RBP12.42□□□□□ -0.42
CCDC172-201ENST00000333254 SEMA3EO15041 775 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 WDHD1O75717 1129 aaPredicted RBP12.42□□□□□ -0.42
CCDC172-201ENST00000333254 DEXIO95424 95 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 SYKP43405 635 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 ITPK1Q13572 414 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 NFXL1Q6ZNB6 911 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 MICU3Q86XE3 530 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 TRIM22Q8IYM9 498 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 NKX2-3Q8TAU0 364 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 ARMT1Q9H993 441 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 GNL3LQ9NVN8 582 aaKnown RBP12.42□□□□□ -0.42
CCDC172-201ENST00000333254 NRBP1Q9UHY1 535 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 DENND2AQ9ULE3 1009 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 PAXBP1Q9Y5B6 917 aa12.42□□□□□ -0.42
CCDC172-201ENST00000333254 COL4A1P02462 1669 aa12.41□□□□□ -0.42
CCDC172-201ENST00000333254 KIF2AO00139 706 aaPredicted RBP12.41□□□□□ -0.42
CCDC172-201ENST00000333254 MMP1P03956 469 aa12.41□□□□□ -0.42
CCDC172-201ENST00000333254 FGRP09769 529 aa12.41□□□□□ -0.42
CCDC172-201ENST00000333254 CHRNDQ07001 517 aa12.41□□□□□ -0.42
CCDC172-201ENST00000333254 LRMPQ12912 555 aa12.41□□□□□ -0.42
CCDC172-201ENST00000333254 WTAPQ15007 396 aa12.41□□□□□ -0.42
CCDC172-201ENST00000333254 SAFBQ15424 915 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCDC172-201ENST00000333254 RTN1Q16799 776 aa12.41□□□□□ -0.42
CCDC172-201ENST00000333254 DPCR1Q3MIW9 517 aa12.41□□□□□ -0.42
CCDC172-201ENST00000333254 RILPL1Q5EBL4 403 aa12.41□□□□□ -0.42
CCDC172-201ENST00000333254 NOSTRINQ8IVI9 506 aa12.41□□□□□ -0.42
CCDC172-201ENST00000333254 LCORLQ8N3X6 602 aa12.41□□□□□ -0.42
CCDC172-201ENST00000333254 ZNF579Q8NAF0 562 aaKnown RBP12.41□□□□□ -0.42
CCDC172-201ENST00000333254 CCDC150Q8NCX0 1101 aa12.41□□□□□ -0.42
CCDC172-201ENST00000333254 HELBQ8NG08 1087 aaPredicted RBP12.41□□□□□ -0.42
CCDC172-201ENST00000333254 BCL11BQ9C0K0 894 aaPredicted RBP12.41□□□□□ -0.42
CCDC172-201ENST00000333254 SEC31BQ9NQW1 1179 aa12.41□□□□□ -0.42
CCDC172-201ENST00000333254 NIP7Q9Y221 180 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCDC172-201ENST00000333254 CNTNAP4Q9C0A0 1308 aa12.4□□□□□ -0.42
CCDC172-201ENST00000333254 ERICH2A1L162 156 aa12.4□□□□□ -0.42
CCDC172-201ENST00000333254 TUBB4AP04350 444 aa12.4□□□□□ -0.42
CCDC172-201ENST00000333254 TDO2P48775 406 aa12.4□□□□□ -0.42
CCDC172-201ENST00000333254 CCZ1BP86790 482 aa12.4□□□□□ -0.42
CCDC172-201ENST00000333254 CCZ1P86791 482 aaPredicted RBP12.4□□□□□ -0.42
CCDC172-201ENST00000333254 GNL2Q13823 731 aaKnown RBP12.4□□□□□ -0.42
CCDC172-201ENST00000333254 NCAPHQ15003 741 aa12.4□□□□□ -0.42
CCDC172-201ENST00000333254 SLC10A5Q5PT55 438 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms