RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 KIF18AQ8NI77 898 aa17.75■□□□□ 0.43
BRCC3-201ENST00000330045 HPSEQ9Y251 543 aa17.75■□□□□ 0.43
BRCC3-201ENST00000330045 IRS4O14654 1257 aaPredicted RBP17.75■□□□□ 0.43
BRCC3-201ENST00000330045 PDE6AP16499 860 aa17.75■□□□□ 0.43
BRCC3-201ENST00000330045 CRKLP46109 303 aaKnown RBP17.75■□□□□ 0.43
BRCC3-201ENST00000330045 DHX8Q14562 1220 aaKnown RBP17.75■□□□□ 0.43
BRCC3-201ENST00000330045 CCDC102BQ68D86 513 aa17.75■□□□□ 0.43
BRCC3-201ENST00000330045 ISM2Q6H9L7 571 aa17.75■□□□□ 0.43
BRCC3-201ENST00000330045 ARMCX5Q6P1M9 558 aa17.75■□□□□ 0.43
BRCC3-201ENST00000330045 IGDCC4Q8TDY8 1250 aa17.75■□□□□ 0.43
BRCC3-201ENST00000330045 SENP2Q9HC62 589 aa17.75■□□□□ 0.43
BRCC3-201ENST00000330045 TAOK2Q9UL54 1235 aa17.75■□□□□ 0.43
BRCC3-201ENST00000330045 ZBTB43O43298 467 aa17.74■□□□□ 0.43
BRCC3-201ENST00000330045 SFPQP23246 707 aaKnown RBP eCLIP17.74■□□□□ 0.43
BRCC3-201ENST00000330045 PHKA1P46020 1223 aa17.74■□□□□ 0.43
BRCC3-201ENST00000330045 PTPAQ15257 358 aa17.74■□□□□ 0.43
BRCC3-201ENST00000330045 SHC4Q6S5L8 630 aa17.74■□□□□ 0.43
BRCC3-201ENST00000330045 NFXL1Q6ZNB6 911 aa17.74■□□□□ 0.43
BRCC3-201ENST00000330045 TUBE1Q9UJT0 475 aa17.74■□□□□ 0.43
BRCC3-201ENST00000330045 ARID4AP29374 1257 aaPredicted RBP17.74■□□□□ 0.43
BRCC3-201ENST00000330045 LMOD1P29536 600 aaPredicted RBP17.74■□□□□ 0.43
BRCC3-201ENST00000330045 IARSP41252 1262 aaKnown RBP17.74■□□□□ 0.43
BRCC3-201ENST00000330045 E4F1Q66K89 784 aaPredicted RBP17.74■□□□□ 0.43
BRCC3-201ENST00000330045 DZIP3Q86Y13 1208 aaKnown RBP17.74■□□□□ 0.43
BRCC3-201ENST00000330045 AIDAQ96BJ3 306 aa17.74■□□□□ 0.43
BRCC3-201ENST00000330045 WWC3Q9ULE0 1092 aa17.74■□□□□ 0.43
BRCC3-201ENST00000330045 TCRBV5S4A2TA0A5A2 114 aa17.73■□□□□ 0.43
BRCC3-201ENST00000330045 UQCRFS1P1P0C7P4 283 aa17.73■□□□□ 0.43
BRCC3-201ENST00000330045 FANCCQ00597 558 aa17.73■□□□□ 0.43
BRCC3-201ENST00000330045 DMTNQ08495 405 aa17.73■□□□□ 0.43
BRCC3-201ENST00000330045 TRIM29Q14134 588 aa17.73■□□□□ 0.43
BRCC3-201ENST00000330045 NTRK3Q16288 839 aa17.73■□□□□ 0.43
BRCC3-201ENST00000330045 STRBPQ96SI9 672 aaKnown RBP17.73■□□□□ 0.43
BRCC3-201ENST00000330045 MAP3K14Q99558 947 aa17.73■□□□□ 0.43
BRCC3-201ENST00000330045 TRMT112Q9UI30 125 aaKnown RBP17.73■□□□□ 0.43
BRCC3-201ENST00000330045 ZNF215Q9UL58 517 aaPredicted RBP17.73■□□□□ 0.43
BRCC3-201ENST00000330045 MYH14Q7Z406 1995 aaKnown RBP17.73■□□□□ 0.43
BRCC3-201ENST00000330045 NRDCO43847 1150 aa17.73■□□□□ 0.43
BRCC3-201ENST00000330045 SGMS1Q86VZ5 419 aa17.73■□□□□ 0.43
BRCC3-201ENST00000330045 LY9Q9HBG7 655 aa17.73■□□□□ 0.43
BRCC3-201ENST00000330045 ECM29Q5VYK3 1845 aa17.73■□□□□ 0.43
BRCC3-201ENST00000330045 UBN2Q6ZU65 1347 aa17.72■□□□□ 0.43
BRCC3-201ENST00000330045 FAM237AA0A1B0GTK4 181 aa17.72■□□□□ 0.43
BRCC3-201ENST00000330045 GOLGA8AA7E2F4 631 aa17.72■□□□□ 0.43
BRCC3-201ENST00000330045 ALX1Q15699 326 aa17.72■□□□□ 0.43
BRCC3-201ENST00000330045 TMEM67Q5HYA8 995 aa17.72■□□□□ 0.43
BRCC3-201ENST00000330045 UTP14CQ5TAP6 766 aaKnown RBP17.72■□□□□ 0.43
BRCC3-201ENST00000330045 MEX3CQ5U5Q3 659 aaKnown RBP17.72■□□□□ 0.43
BRCC3-201ENST00000330045 BCL11BQ9C0K0 894 aaPredicted RBP17.72■□□□□ 0.43
BRCC3-201ENST00000330045 OGFRQ9NZT2 677 aa17.72■□□□□ 0.43
BRCC3-201ENST00000330045 PSDA5PKW4 1024 aaPredicted RBP17.72■□□□□ 0.43
BRCC3-201ENST00000330045 RANBP6O60518 1105 aaKnown RBP17.72■□□□□ 0.43
BRCC3-201ENST00000330045 PDE8AO60658 829 aa17.72■□□□□ 0.43
BRCC3-201ENST00000330045 KCNJ6P48051 423 aa17.72■□□□□ 0.43
BRCC3-201ENST00000330045 RESP18Q5W5W9 173 aa17.72■□□□□ 0.43
BRCC3-201ENST00000330045 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.72■□□□□ 0.43
BRCC3-201ENST00000330045 FAM217BQ9NTX9 383 aaPredicted RBP17.72■□□□□ 0.43
BRCC3-201ENST00000330045 LRP5O75197 1615 aa17.71■□□□□ 0.43
BRCC3-201ENST00000330045 EIF5P55010 431 aaKnown RBP17.71■□□□□ 0.43
BRCC3-201ENST00000330045 ERO1AQ96HE7 468 aa17.71■□□□□ 0.43
BRCC3-201ENST00000330045 PPP1R13BQ96KQ4 1090 aa17.71■□□□□ 0.43
BRCC3-201ENST00000330045 CLIC6Q96NY7 704 aa17.71■□□□□ 0.43
BRCC3-201ENST00000330045 MYL10Q9BUA6 226 aa17.71■□□□□ 0.43
BRCC3-201ENST00000330045 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.71■□□□□ 0.43
BRCC3-201ENST00000330045 HSD3B7Q9H2F3 369 aa17.71■□□□□ 0.43
BRCC3-201ENST00000330045 INCENPQ9NQS7 918 aa17.71■□□□□ 0.43
BRCC3-201ENST00000330045 CCDC87Q9NVE4 849 aa17.71■□□□□ 0.43
BRCC3-201ENST00000330045 SPATA31A6Q5VVP1 1343 aa17.71■□□□□ 0.43
BRCC3-201ENST00000330045 PATL2C9JE40 543 aaKnown RBP17.71■□□□□ 0.42
BRCC3-201ENST00000330045 CUTAO60888 179 aa17.71■□□□□ 0.42
BRCC3-201ENST00000330045 ATP1A3P13637 1013 aa17.71■□□□□ 0.42
BRCC3-201ENST00000330045 IL6STP40189 918 aaPredicted RBP17.71■□□□□ 0.42
BRCC3-201ENST00000330045 LIFRP42702 1097 aa17.71■□□□□ 0.42
BRCC3-201ENST00000330045 PNOCQ13519 176 aa17.71■□□□□ 0.42
BRCC3-201ENST00000330045 PUM3Q15397 648 aaKnown RBP17.71■□□□□ 0.42
BRCC3-201ENST00000330045 LPIN2Q92539 896 aa17.71■□□□□ 0.42
BRCC3-201ENST00000330045 ARAP2Q8WZ64 1704 aa17.71■□□□□ 0.42
BRCC3-201ENST00000330045 MYL5Q02045 173 aa17.7■□□□□ 0.42
BRCC3-201ENST00000330045 NAPBQ9H115 298 aa17.7■□□□□ 0.42
BRCC3-201ENST00000330045 ZSWIM5Q9P217 1185 aa17.7■□□□□ 0.42
BRCC3-201ENST00000330045 SLC12A7Q9Y666 1083 aa17.7■□□□□ 0.42
BRCC3-201ENST00000330045 AFF2P51816 1311 aa17.7■□□□□ 0.42
BRCC3-201ENST00000330045 NUP98P52948 1817 aa17.7■□□□□ 0.42
BRCC3-201ENST00000330045 IFIT3O14879 490 aaKnown RBP17.7■□□□□ 0.42
BRCC3-201ENST00000330045 SLU7O95391 586 aaKnown RBP17.7■□□□□ 0.42
BRCC3-201ENST00000330045 SSRP1Q08945 709 aaKnown RBP17.7■□□□□ 0.42
BRCC3-201ENST00000330045 IFNL3Q8IZI9 196 aa17.7■□□□□ 0.42
BRCC3-201ENST00000330045 HELBQ8NG08 1087 aaPredicted RBP17.7■□□□□ 0.42
BRCC3-201ENST00000330045 SLC26A6Q9BXS9 759 aa17.7■□□□□ 0.42
BRCC3-201ENST00000330045 GTPBP4Q9BZE4 634 aaKnown RBP17.7■□□□□ 0.42
BRCC3-201ENST00000330045 UBASH3AP57075 661 aa17.69■□□□□ 0.42
BRCC3-201ENST00000330045 LINC00116Q8NCU8 138 aa17.69■□□□□ 0.42
BRCC3-201ENST00000330045 STK36Q9NRP7 1315 aa17.69■□□□□ 0.42
BRCC3-201ENST00000330045 CBFA2T2O43439 604 aa17.69■□□□□ 0.42
BRCC3-201ENST00000330045 SERPINC1P01008 464 aa17.69■□□□□ 0.42
BRCC3-201ENST00000330045 FGFR2P21802 821 aa17.69■□□□□ 0.42
BRCC3-201ENST00000330045 CTDSPL2Q05D32 466 aa17.69■□□□□ 0.42
BRCC3-201ENST00000330045 LONRF3Q496Y0 759 aa17.69■□□□□ 0.42
BRCC3-201ENST00000330045 OLFM4Q6UX06 510 aa17.69■□□□□ 0.42
BRCC3-201ENST00000330045 SPATA5Q8NB90 893 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms