RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 USP17L12C9JPN9 530 aa23.79■■□□□ 1.4
RIPPLY3-201ENST00000329553 USP17L21D6R901 530 aa23.79■■□□□ 1.4
RIPPLY3-201ENST00000329553 CAVIN1Q6NZI2 390 aaKnown RBP23.79■■□□□ 1.4
RIPPLY3-201ENST00000329553 PPP1R9BQ96SB3 815 aa23.79■■□□□ 1.4
RIPPLY3-201ENST00000329553 ATP8A2Q9NTI2 1148 aa23.79■■□□□ 1.4
RIPPLY3-201ENST00000329553 PTPDC1A2A3K4 754 aa23.78■■□□□ 1.4
RIPPLY3-201ENST00000329553 GOLGA8BA8MQT2 603 aa23.78■■□□□ 1.4
RIPPLY3-201ENST00000329553 MFSD14BQ5SR56 506 aa23.78■■□□□ 1.4
RIPPLY3-201ENST00000329553 CDC37L1Q7L3B6 337 aa23.78■■□□□ 1.4
RIPPLY3-201ENST00000329553 RAB11FIP4Q86YS3 637 aa23.78■■□□□ 1.4
RIPPLY3-201ENST00000329553 TCHHQ07283 1943 aa23.78■■□□□ 1.4
RIPPLY3-201ENST00000329553 KIAA1551Q9HCM1 1747 aa23.78■■□□□ 1.4
RIPPLY3-201ENST00000329553 FAM205AQ6ZU69 1335 aa23.78■■□□□ 1.4
RIPPLY3-201ENST00000329553 CCDC173Q0VFZ6 552 aa23.78■■□□□ 1.4
RIPPLY3-201ENST00000329553 LY9Q9HBG7 655 aa23.78■■□□□ 1.4
RIPPLY3-201ENST00000329553 LDHCP07864 332 aa23.77■■□□□ 1.4
RIPPLY3-201ENST00000329553 GTF2IP78347 998 aa23.77■■□□□ 1.4
RIPPLY3-201ENST00000329553 TMEM67Q5HYA8 995 aa23.77■■□□□ 1.4
RIPPLY3-201ENST00000329553 GPT2Q8TD30 523 aa23.77■■□□□ 1.4
RIPPLY3-201ENST00000329553 CHMP4CQ96CF2 233 aa23.77■■□□□ 1.4
RIPPLY3-201ENST00000329553 TRIM44Q96DX7 344 aaPredicted RBP23.77■■□□□ 1.4
RIPPLY3-201ENST00000329553 IFIT3O14879 490 aaKnown RBP23.76■■□□□ 1.39
RIPPLY3-201ENST00000329553 PPFIA3O75145 1194 aa23.76■■□□□ 1.39
RIPPLY3-201ENST00000329553 PPP4CP60510 307 aa23.76■■□□□ 1.39
RIPPLY3-201ENST00000329553 HMGN5P82970 282 aaKnown RBP23.76■■□□□ 1.39
RIPPLY3-201ENST00000329553 FAM184AQ8NB25 1140 aa23.76■■□□□ 1.39
RIPPLY3-201ENST00000329553 TBC1D22AQ8WUA7 517 aa23.76■■□□□ 1.39
RIPPLY3-201ENST00000329553 SLX4Q8IY92 1834 aa23.76■■□□□ 1.39
RIPPLY3-201ENST00000329553 SH3RF3Q8TEJ3 882 aaPredicted RBP23.76■■□□□ 1.39
RIPPLY3-201ENST00000329553 ATP6V1DQ9Y5K8 247 aa23.76■■□□□ 1.39
RIPPLY3-201ENST00000329553 MYH2Q9UKX2 1941 aa23.76■■□□□ 1.39
RIPPLY3-201ENST00000329553 MROH7-TTC4A0A0A0MT08 1334 aa23.75■■□□□ 1.39
RIPPLY3-201ENST00000329553 NCLP19338 710 aaKnown RBP23.75■■□□□ 1.39
RIPPLY3-201ENST00000329553 LIFRP42702 1097 aa23.75■■□□□ 1.39
RIPPLY3-201ENST00000329553 EVX2Q03828 476 aa23.75■■□□□ 1.39
RIPPLY3-201ENST00000329553 DOK7Q18PE1 504 aa23.75■■□□□ 1.39
RIPPLY3-201ENST00000329553 SGMS1Q86VZ5 419 aa23.75■■□□□ 1.39
RIPPLY3-201ENST00000329553 ZKSCAN3Q9BRR0 538 aa23.75■■□□□ 1.39
RIPPLY3-201ENST00000329553 GDPD2Q9HCC8 539 aa23.75■■□□□ 1.39
RIPPLY3-201ENST00000329553 BAG3O95817 575 aa23.75■■□□□ 1.39
RIPPLY3-201ENST00000329553 RTFDC1Q9BY42 306 aaPredicted RBP23.75■■□□□ 1.39
RIPPLY3-201ENST00000329553 APOA5Q6Q788 366 aa23.74■■□□□ 1.39
RIPPLY3-201ENST00000329553 FERMT3Q86UX7 667 aa23.74■■□□□ 1.39
RIPPLY3-201ENST00000329553 CNKSR1Q969H4 720 aa23.74■■□□□ 1.39
RIPPLY3-201ENST00000329553 ZNF219Q9P2Y4 722 aaPredicted RBP23.74■■□□□ 1.39
RIPPLY3-201ENST00000329553 FGRP09769 529 aa23.74■■□□□ 1.39
RIPPLY3-201ENST00000329553 MKRN1Q9UHC7 482 aaKnown RBP23.74■■□□□ 1.39
RIPPLY3-201ENST00000329553 CNPY2Q9Y2B0 182 aa23.74■■□□□ 1.39
RIPPLY3-201ENST00000329553 DHX16O60231 1041 aaKnown RBP23.73■■□□□ 1.39
RIPPLY3-201ENST00000329553 CYP2D6P10635 497 aa23.73■■□□□ 1.39
RIPPLY3-201ENST00000329553 FDPSP14324 419 aaKnown RBP23.73■■□□□ 1.39
RIPPLY3-201ENST00000329553 SBK1Q52WX2 424 aa23.73■■□□□ 1.39
RIPPLY3-201ENST00000329553 NFXL1Q6ZNB6 911 aa23.73■■□□□ 1.39
RIPPLY3-201ENST00000329553 NOL10Q9BSC4 688 aaKnown RBP23.73■■□□□ 1.39
RIPPLY3-201ENST00000329553 ESR2Q92731 530 aa23.72■■□□□ 1.39
RIPPLY3-201ENST00000329553 EYA3Q99504 573 aa23.72■■□□□ 1.39
RIPPLY3-201ENST00000329553 GPR75-ASB3A0A0A6YYF3 556 aa23.72■■□□□ 1.39
RIPPLY3-201ENST00000329553 RXRAP19793 462 aa23.72■■□□□ 1.39
RIPPLY3-201ENST00000329553 USP5P45974 858 aa23.72■■□□□ 1.39
RIPPLY3-201ENST00000329553 USP48Q86UV5 1035 aa23.72■■□□□ 1.39
RIPPLY3-201ENST00000329553 FAM163AQ96GL9 167 aaPredicted RBP23.72■■□□□ 1.39
RIPPLY3-201ENST00000329553 MTA3Q9BTC8 594 aa23.72■■□□□ 1.39
RIPPLY3-201ENST00000329553 MCM9Q9NXL9 1143 aa23.72■■□□□ 1.39
RIPPLY3-201ENST00000329553 ARPP21Q9UBL0 812 aaPredicted RBP23.72■■□□□ 1.39
RIPPLY3-201ENST00000329553 PRDM1O75626 825 aa23.71■■□□□ 1.39
RIPPLY3-201ENST00000329553 USP17L8P0C7I0 530 aa23.71■■□□□ 1.39
RIPPLY3-201ENST00000329553 BTDP43251 543 aa23.71■■□□□ 1.39
RIPPLY3-201ENST00000329553 METAP2P50579 478 aaKnown RBP eCLIP23.71■■□□□ 1.39
RIPPLY3-201ENST00000329553 DNM1Q05193 864 aaKnown RBP23.71■■□□□ 1.39
RIPPLY3-201ENST00000329553 C7orf43Q8WVR3 580 aa23.71■■□□□ 1.39
RIPPLY3-201ENST00000329553 FBXW7Q969H0 707 aa23.71■■□□□ 1.39
RIPPLY3-201ENST00000329553 H3BQV1 296 aa23.71■■□□□ 1.39
RIPPLY3-201ENST00000329553 ZBTB43O43298 467 aa23.71■■□□□ 1.39
RIPPLY3-201ENST00000329553 ADD1P35611 737 aaKnown RBP23.71■■□□□ 1.39
RIPPLY3-201ENST00000329553 SART3Q15020 963 aaKnown RBP23.71■■□□□ 1.39
RIPPLY3-201ENST00000329553 IFFO2Q5TF58 517 aa23.71■■□□□ 1.39
RIPPLY3-201ENST00000329553 KIF3AQ9Y496 699 aa23.71■■□□□ 1.39
RIPPLY3-201ENST00000329553 G3V3G9 751 aa23.7■■□□□ 1.38
RIPPLY3-201ENST00000329553 CPLX1O14810 134 aa23.7■■□□□ 1.38
RIPPLY3-201ENST00000329553 PCP11498 1178 aaKnown RBP23.7■■□□□ 1.38
RIPPLY3-201ENST00000329553 WTAPQ15007 396 aa23.7■■□□□ 1.38
RIPPLY3-201ENST00000329553 DCAF8Q5TAQ9 597 aa23.7■■□□□ 1.38
RIPPLY3-201ENST00000329553 MICU3Q86XE3 530 aa23.7■■□□□ 1.38
RIPPLY3-201ENST00000329553 CERS5Q8N5B7 392 aa23.7■■□□□ 1.38
RIPPLY3-201ENST00000329553 TGFBRAP1Q8WUH2 860 aa23.7■■□□□ 1.38
RIPPLY3-201ENST00000329553 ANP32BQ92688 251 aaKnown RBP23.7■■□□□ 1.38
RIPPLY3-201ENST00000329553 MYL10Q9BUA6 226 aa23.7■■□□□ 1.38
RIPPLY3-201ENST00000329553 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.7■■□□□ 1.38
RIPPLY3-201ENST00000329553 SLC12A7Q9Y666 1083 aa23.7■■□□□ 1.38
RIPPLY3-201ENST00000329553 CCDC69A6NI79 296 aa23.69■■□□□ 1.38
RIPPLY3-201ENST00000329553 FOSBP53539 338 aa23.69■■□□□ 1.38
RIPPLY3-201ENST00000329553 FAM173BQ6P4H8 233 aa23.69■■□□□ 1.38
RIPPLY3-201ENST00000329553 ERICH2A1L162 156 aa23.69■■□□□ 1.38
RIPPLY3-201ENST00000329553 RANBP6O60518 1105 aaKnown RBP23.69■■□□□ 1.38
RIPPLY3-201ENST00000329553 CDC27P30260 824 aa23.69■■□□□ 1.38
RIPPLY3-201ENST00000329553 SLF2Q8IX21 1173 aa23.69■■□□□ 1.38
RIPPLY3-201ENST00000329553 SLC16A10Q8TF71 515 aa23.69■■□□□ 1.38
RIPPLY3-201ENST00000329553 UBAC1Q9BSL1 405 aa23.69■■□□□ 1.38
RIPPLY3-201ENST00000329553 MXD3Q9BW11 206 aa23.69■■□□□ 1.38
RIPPLY3-201ENST00000329553 RBM27Q9P2N5 1060 aaKnown RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms