RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 ASPAP45381 313 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 CPSF6Q16630 551 aaKnown RBP eCLIP2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 EAPPQ56P03 285 aaPredicted RBP2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 INTS5Q6P9B9 1019 aaKnown RBP2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 TPTE2Q6XPS3 522 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 ANKRD24Q8TF21 1146 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 MFSD14AQ96MC6 490 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 OSBPL7Q9BZF2 842 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 ATXN3LQ9H3M9 355 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 PIDD1Q9HB75 910 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 ATG3Q9NT62 314 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 KIAA0586Q9BVV6 1533 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 WDR64B1ANS9 1081 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 TMPRSS2O15393 492 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 TGFB1P01137 390 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 USP17L7P0C7H9 530 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 EIF4BP23588 611 aaKnown RBP2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 ARNTP27540 789 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 GNA15P30679 374 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 ID3Q02535 119 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 KIF4BQ2VIQ3 1234 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 NECAB3Q96P71 396 aaPredicted RBP2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 METTL22Q9BUU2 404 aaPredicted RBP2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 CBX8Q9HC52 389 aa2.91□□□□□ -1.94
CCDC144A-201ENST00000328495 HYAL3O43820 417 aaPredicted RBP2.9□□□□□ -1.94
CCDC144A-201ENST00000328495 SSTR4P31391 388 aa2.9□□□□□ -1.94
CCDC144A-201ENST00000328495 PDZD3Q86UT5 571 aa2.9□□□□□ -1.94
CCDC144A-201ENST00000328495 FBXL6Q8N531 539 aa2.9□□□□□ -1.94
CCDC144A-201ENST00000328495 ACSBG1Q96GR2 724 aa2.9□□□□□ -1.94
CCDC144A-201ENST00000328495 TBC1D32Q96NH3 1257 aa2.9□□□□□ -1.94
CCDC144A-201ENST00000328495 OSBPL1AQ9BXW6 950 aa2.9□□□□□ -1.94
CCDC144A-201ENST00000328495 GSX1Q9H4S2 264 aaPredicted RBP2.9□□□□□ -1.94
CCDC144A-201ENST00000328495 ACSS3Q9H6R3 686 aa2.9□□□□□ -1.94
CCDC144A-201ENST00000328495 FAM105AQ9NUU6 356 aa2.9□□□□□ -1.94
CCDC144A-201ENST00000328495 WDR97A6NE52 1622 aa2.9□□□□□ -1.95
CCDC144A-201ENST00000328495 ZNF862O60290 1169 aa2.9□□□□□ -1.95
CCDC144A-201ENST00000328495 CD97P48960 835 aa2.9□□□□□ -1.95
CCDC144A-201ENST00000328495 SEMA6CQ9H3T2 930 aa2.9□□□□□ -1.95
CCDC144A-201ENST00000328495 CRIM1Q9NZV1 1036 aa2.9□□□□□ -1.95
CCDC144A-201ENST00000328495 PRKAG2Q9UGJ0 569 aa2.9□□□□□ -1.95
CCDC144A-201ENST00000328495 PPP1R9AQ9ULJ8 1098 aa2.9□□□□□ -1.95
CCDC144A-201ENST00000328495 TTF2Q9UNY4 1162 aaKnown RBP2.9□□□□□ -1.95
CCDC144A-201ENST00000328495 LEMD3Q9Y2U8 911 aa2.9□□□□□ -1.95
CCDC144A-201ENST00000328495 FBXO24O75426 580 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 NFICP08651 508 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 LRRC14Q15048 493 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 MAP1SQ66K74 1059 aaPredicted RBP2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 PIM2Q9P1W9 311 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 DAGLAQ9Y4D2 1042 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 ENC1O14682 589 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 F13BP05160 661 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 CYP27A1Q02318 531 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 CCDC27Q2M243 656 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 ZAR1Q86SH2 424 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 STK35Q8TDR2 534 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 WDR89Q96FK6 387 aaPredicted RBP2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 DUSP9Q99956 384 aaKnown RBP2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 CUX1P39880 1505 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 PTPRMP28827 1452 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 PRR19A6NJB7 356 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 KIAA1324LA8MWY0 1029 aaPredicted RBP2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 ERCC3P19447 782 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 YY1P25490 414 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 ZNF252P-AS1Q0IIN9 211 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 SCARA3Q6AZY7 606 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 LLGL2Q6P1M3 1020 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 NPAS4Q8IUM7 802 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 FANCD2OSQ96PS1 177 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 PCDHGC5Q9Y5F6 944 aa2.89□□□□□ -1.95
CCDC144A-201ENST00000328495 XIRP1Q702N8 1843 aaKnown RBP2.88□□□□□ -1.95
CCDC144A-201ENST00000328495 TRIM37O94972 964 aa2.88□□□□□ -1.95
CCDC144A-201ENST00000328495 ITGAEP38570 1179 aa2.88□□□□□ -1.95
CCDC144A-201ENST00000328495 DUSP27Q5VZP5 1158 aa2.88□□□□□ -1.95
CCDC144A-201ENST00000328495 DNAJC14Q6Y2X3 702 aaPredicted RBP2.88□□□□□ -1.95
CCDC144A-201ENST00000328495 SV2BQ7L1I2 683 aa2.88□□□□□ -1.95
CCDC144A-201ENST00000328495 GPBAR1Q8TDU6 330 aa2.88□□□□□ -1.95
CCDC144A-201ENST00000328495 GZF1Q9H116 711 aaPredicted RBP2.88□□□□□ -1.95
CCDC144A-201ENST00000328495 AK5Q9Y6K8 562 aa2.88□□□□□ -1.95
CCDC144A-201ENST00000328495 CELA3AP09093 270 aa2.88□□□□□ -1.95
CCDC144A-201ENST00000328495 ERVK-24P63145 666 aa2.88□□□□□ -1.95
CCDC144A-201ENST00000328495 PCNX4Q63HM2 1172 aa2.88□□□□□ -1.95
CCDC144A-201ENST00000328495 CYB5RLQ6IPT4 315 aa2.88□□□□□ -1.95
CCDC144A-201ENST00000328495 SMYD4Q8IYR2 804 aaPredicted RBP2.88□□□□□ -1.95
CCDC144A-201ENST00000328495 CYP8B1Q9UNU6 501 aa2.88□□□□□ -1.95
CCDC144A-201ENST00000328495 RNGTTO60942 597 aaKnown RBP2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 PAGE1O75459 146 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 FOSL1P15407 271 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 SPINK2P20155 84 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 ADMP35318 185 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 XPCQ01831 940 aaPredicted RBP2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 PSMD2Q13200 908 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 TTLL4Q14679 1199 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 PICK1Q9NRD5 415 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 DISC1Q9NRI5 854 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 FAM170BA6NMN3 283 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 CYP26A1O43174 497 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 HCLS1P14317 486 aaPredicted RBP2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 LMNB1P20700 586 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 BMP6P22004 513 aa2.87□□□□□ -1.95
CCDC144A-201ENST00000328495 CCDC85BQ15834 202 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms