RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 POSTNQ15063 836 aa16.72■□□□□ 0.27
SSBP3-201ENST00000326956 METTL24Q5JXM2 366 aa16.72■□□□□ 0.27
SSBP3-201ENST00000326956 CYB5R4Q7L1T6 521 aa16.72■□□□□ 0.27
SSBP3-201ENST00000326956 MLKLQ8NB16 471 aa16.72■□□□□ 0.27
SSBP3-201ENST00000326956 WASF1Q92558 559 aa16.72■□□□□ 0.27
SSBP3-201ENST00000326956 FBXO3Q9UK99 471 aa16.72■□□□□ 0.27
SSBP3-201ENST00000326956 JAKMIP3Q5VZ66 844 aa16.72■□□□□ 0.27
SSBP3-201ENST00000326956 TOGARAM2Q6ZUX3 1019 aa16.72■□□□□ 0.27
SSBP3-201ENST00000326956 TMEM139Q8IV31 216 aa16.72■□□□□ 0.27
SSBP3-201ENST00000326956 NUTM2AQ8IVF1 878 aaPredicted RBP16.72■□□□□ 0.27
SSBP3-201ENST00000326956 FOXP4Q8IVH2 680 aaPredicted RBP16.72■□□□□ 0.27
SSBP3-201ENST00000326956 NEK11Q8NG66 645 aa16.72■□□□□ 0.27
SSBP3-201ENST00000326956 RABGGTAQ92696 567 aa16.72■□□□□ 0.27
SSBP3-201ENST00000326956 TRERF1Q96PN7 1200 aa16.72■□□□□ 0.27
SSBP3-201ENST00000326956 SLC12A7Q9Y666 1083 aa16.72■□□□□ 0.27
SSBP3-201ENST00000326956 CAMTA1Q9Y6Y1 1673 aa16.71■□□□□ 0.27
SSBP3-201ENST00000326956 FANCGO15287 622 aa16.71■□□□□ 0.27
SSBP3-201ENST00000326956 FOXN1O15353 648 aa16.71■□□□□ 0.27
SSBP3-201ENST00000326956 IRX5P78411 483 aaPredicted RBP16.71■□□□□ 0.27
SSBP3-201ENST00000326956 CHRNA2Q15822 529 aa16.71■□□□□ 0.27
SSBP3-201ENST00000326956 MYL10Q9BUA6 226 aa16.71■□□□□ 0.27
SSBP3-201ENST00000326956 MAN1B1Q9UKM7 699 aa16.71■□□□□ 0.27
SSBP3-201ENST00000326956 MRFAP1Q9Y605 127 aa16.71■□□□□ 0.27
SSBP3-201ENST00000326956 POLR2DO15514 142 aaKnown RBP16.71■□□□□ 0.27
SSBP3-201ENST00000326956 TBC1D8O95759 1140 aa16.71■□□□□ 0.27
SSBP3-201ENST00000326956 CCDC175P0C221 793 aa16.71■□□□□ 0.27
SSBP3-201ENST00000326956 TBC1D10CQ8IV04 446 aa16.71■□□□□ 0.27
SSBP3-201ENST00000326956 TRMT44Q8IYL2 757 aaKnown RBP16.71■□□□□ 0.27
SSBP3-201ENST00000326956 AK7Q96M32 723 aa16.71■□□□□ 0.27
SSBP3-201ENST00000326956 DESI2Q9BSY9 194 aa16.71■□□□□ 0.27
SSBP3-201ENST00000326956 PARD6BQ9BYG5 372 aa16.71■□□□□ 0.27
SSBP3-201ENST00000326956 INTS13Q9NVM9 706 aa16.71■□□□□ 0.27
SSBP3-201ENST00000326956 RAI14Q9P0K7 980 aa16.71■□□□□ 0.27
SSBP3-201ENST00000326956 DENND2AQ9ULE3 1009 aa16.71■□□□□ 0.27
SSBP3-201ENST00000326956 RGPD5Q99666 1765 aa16.71■□□□□ 0.27
SSBP3-201ENST00000326956 PPFIBP1Q86W92 1011 aa16.7■□□□□ 0.26
SSBP3-201ENST00000326956 NOSTRINQ8IVI9 506 aa16.7■□□□□ 0.26
SSBP3-201ENST00000326956 TC2NQ8N9U0 490 aa16.7■□□□□ 0.26
SSBP3-201ENST00000326956 ZSWIM4Q9H7M6 989 aa16.7■□□□□ 0.26
SSBP3-201ENST00000326956 TBC1D2BQ9UPU7 963 aa16.7■□□□□ 0.26
SSBP3-201ENST00000326956 IFIT3O14879 490 aaKnown RBP16.7■□□□□ 0.26
SSBP3-201ENST00000326956 ATP2B1P20020 1258 aa16.7■□□□□ 0.26
SSBP3-201ENST00000326956 TBX2Q13207 712 aaPredicted RBP16.7■□□□□ 0.26
SSBP3-201ENST00000326956 TTF1Q15361 905 aaPredicted RBP16.7■□□□□ 0.26
SSBP3-201ENST00000326956 TRIM22Q8IYM9 498 aa16.7■□□□□ 0.26
SSBP3-201ENST00000326956 ENOX1Q8TC92 643 aaKnown RBP16.7■□□□□ 0.26
SSBP3-201ENST00000326956 DHX58Q96C10 678 aa16.7■□□□□ 0.26
SSBP3-201ENST00000326956 PROSER2Q86WR7 435 aaPredicted RBP16.69■□□□□ 0.26
SSBP3-201ENST00000326956 ZCCHC17Q9NP64 241 aaKnown RBP16.69■□□□□ 0.26
SSBP3-201ENST00000326956 TOMM22Q9NS69 142 aa16.69■□□□□ 0.26
SSBP3-201ENST00000326956 SERTAD1Q9UHV2 236 aa16.69■□□□□ 0.26
SSBP3-201ENST00000326956 ADD2P35612 726 aa16.69■□□□□ 0.26
SSBP3-201ENST00000326956 ZNF827Q17R98 1081 aa16.69■□□□□ 0.26
SSBP3-201ENST00000326956 KANK3Q6NY19 840 aa16.69■□□□□ 0.26
SSBP3-201ENST00000326956 STK11IPQ8N1F8 1099 aa16.69■□□□□ 0.26
SSBP3-201ENST00000326956 AIDAQ96BJ3 306 aa16.69■□□□□ 0.26
SSBP3-201ENST00000326956 ABCC12Q96J65 1359 aa16.69■□□□□ 0.26
SSBP3-201ENST00000326956 AKR1B15C9JRZ8 316 aaPredicted RBP16.69■□□□□ 0.26
SSBP3-201ENST00000326956 SASH3O75995 380 aa16.69■□□□□ 0.26
SSBP3-201ENST00000326956 BMP6P22004 513 aa16.69■□□□□ 0.26
SSBP3-201ENST00000326956 LZTFL1Q9NQ48 299 aa16.69■□□□□ 0.26
SSBP3-201ENST00000326956 BTBD18B2RXH4 712 aa16.68■□□□□ 0.26
SSBP3-201ENST00000326956 KIF5CO60282 957 aa16.68■□□□□ 0.26
SSBP3-201ENST00000326956 TXLNAP40222 546 aa16.68■□□□□ 0.26
SSBP3-201ENST00000326956 LDHAL6AQ6ZMR3 332 aa16.68■□□□□ 0.26
SSBP3-201ENST00000326956 DIS3L2Q8IYB7 885 aaKnown RBP16.68■□□□□ 0.26
SSBP3-201ENST00000326956 SENP2Q9HC62 589 aa16.68■□□□□ 0.26
SSBP3-201ENST00000326956 CNNM1Q9NRU3 951 aa16.68■□□□□ 0.26
SSBP3-201ENST00000326956 UBN2Q6ZU65 1347 aa16.68■□□□□ 0.26
SSBP3-201ENST00000326956 TMEM94Q12767 1356 aa16.68■□□□□ 0.26
SSBP3-201ENST00000326956 FMR1Q06787 632 aaKnown RBP eCLIP16.68■□□□□ 0.26
SSBP3-201ENST00000326956 ELOA2Q8IYF1 753 aaPredicted RBP16.68■□□□□ 0.26
SSBP3-201ENST00000326956 CPLX3Q8WVH0 158 aa16.68■□□□□ 0.26
SSBP3-201ENST00000326956 FAM89AQ96GI7 184 aa16.68■□□□□ 0.26
SSBP3-201ENST00000326956 TSPYL1Q9H0U9 437 aa16.68■□□□□ 0.26
SSBP3-201ENST00000326956 TMEM51Q9NW97 253 aa16.68■□□□□ 0.26
SSBP3-201ENST00000326956 MCAMP43121 646 aa16.67■□□□□ 0.26
SSBP3-201ENST00000326956 CHMP4BP1P59074 171 aa16.67■□□□□ 0.26
SSBP3-201ENST00000326956 RILPL1Q5EBL4 403 aa16.67■□□□□ 0.26
SSBP3-201ENST00000326956 RSRC2Q7L4I2 434 aaKnown RBP16.67■□□□□ 0.26
SSBP3-201ENST00000326956 TRIML1Q8N9V2 468 aa16.67■□□□□ 0.26
SSBP3-201ENST00000326956 CABLES1Q8TDN4 633 aa16.67■□□□□ 0.26
SSBP3-201ENST00000326956 SAMSN1Q9NSI8 373 aaKnown RBP16.67■□□□□ 0.26
SSBP3-201ENST00000326956 CEP131Q9UPN4 1083 aa16.67■□□□□ 0.26
SSBP3-201ENST00000326956 RANBP6O60518 1105 aaKnown RBP16.67■□□□□ 0.26
SSBP3-201ENST00000326956 ST5P78524 1137 aa16.67■□□□□ 0.26
SSBP3-201ENST00000326956 CCDC82Q8N4S0 544 aa16.67■□□□□ 0.26
SSBP3-201ENST00000326956 NBPF3Q9H094 633 aa16.67■□□□□ 0.26
SSBP3-201ENST00000326956 CWC15Q9P013 229 aaKnown RBP16.67■□□□□ 0.26
SSBP3-201ENST00000326956 NWD2Q9ULI1 1742 aa16.67■□□□□ 0.26
SSBP3-201ENST00000326956 KIF1AQ12756 1690 aa16.67■□□□□ 0.26
SSBP3-201ENST00000326956 ZNF532Q9HCE3 1301 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 CCDC151A5D8V7 595 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 PRR29P0C7W0 189 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 TCIRG1Q13488 830 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 BRD3Q15059 726 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 NTRK3Q16288 839 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 LONRF2Q1L5Z9 754 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 FILIP1LQ4L180 1135 aa16.66■□□□□ 0.26
SSBP3-201ENST00000326956 KLHL10Q6JEL2 608 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms