RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 UBR3Q6ZT12 1888 aa11.99□□□□□ -0.49
ABCF1-201ENST00000326195 TNS1Q9HBL0 1735 aaKnown RBP11.99□□□□□ -0.49
ABCF1-201ENST00000326195 CCDC93Q567U6 631 aa11.99□□□□□ -0.49
ABCF1-201ENST00000326195 TAOK3Q9H2K8 898 aa11.99□□□□□ -0.49
ABCF1-201ENST00000326195 FHOD1Q9Y613 1164 aa11.99□□□□□ -0.49
ABCF1-201ENST00000326195 MRVI1Q9Y6F6 885 aa11.99□□□□□ -0.49
ABCF1-201ENST00000326195 PICALMQ13492 652 aa11.99□□□□□ -0.49
ABCF1-201ENST00000326195 UBE4AQ14139 1066 aa11.99□□□□□ -0.49
ABCF1-201ENST00000326195 AATFQ9NY61 560 aaKnown RBP eCLIP11.99□□□□□ -0.49
ABCF1-201ENST00000326195 A0A0D9SFI3 127 aa11.98□□□□□ -0.49
ABCF1-201ENST00000326195 SHTN1A0MZ66 631 aa11.98□□□□□ -0.49
ABCF1-201ENST00000326195 ZSCAN22P10073 491 aaPredicted RBP11.98□□□□□ -0.49
ABCF1-201ENST00000326195 CPA1P15085 419 aa11.98□□□□□ -0.49
ABCF1-201ENST00000326195 SYT1P21579 422 aa11.98□□□□□ -0.49
ABCF1-201ENST00000326195 CKAP2LQ8IYA6 745 aa11.98□□□□□ -0.49
ABCF1-201ENST00000326195 TCEANC2Q96MN5 208 aa11.98□□□□□ -0.49
ABCF1-201ENST00000326195 TRMT1Q9NXH9 659 aaKnown RBP11.98□□□□□ -0.49
ABCF1-201ENST00000326195 STAP2Q9UGK3 403 aa11.98□□□□□ -0.49
ABCF1-201ENST00000326195 HIP1O00291 1037 aa11.98□□□□□ -0.49
ABCF1-201ENST00000326195 ATP2B4P23634 1241 aa11.98□□□□□ -0.49
ABCF1-201ENST00000326195 PSMA5P28066 241 aa11.98□□□□□ -0.49
ABCF1-201ENST00000326195 HOXA10P31260 410 aaPredicted RBP11.98□□□□□ -0.49
ABCF1-201ENST00000326195 PLA2G4AP47712 749 aa11.98□□□□□ -0.49
ABCF1-201ENST00000326195 DYNLL1P63167 89 aaKnown RBP11.98□□□□□ -0.49
ABCF1-201ENST00000326195 RNF181Q9P0P0 153 aa11.98□□□□□ -0.49
ABCF1-201ENST00000326195 SGSM2O43147 1006 aa11.98□□□□□ -0.49
ABCF1-201ENST00000326195 ECE2O60344 883 aa11.98□□□□□ -0.49
ABCF1-201ENST00000326195 SLURP2P0DP57 97 aa11.98□□□□□ -0.49
ABCF1-201ENST00000326195 YBX3P16989 372 aaKnown RBP eCLIP11.98□□□□□ -0.492e-8■□□□□ 10.6
ABCF1-201ENST00000326195 NOP2P46087 812 aaKnown RBP11.98□□□□□ -0.49
ABCF1-201ENST00000326195 TCP10Q12799 353 aa11.98□□□□□ -0.49
ABCF1-201ENST00000326195 SYT10Q6XYQ8 523 aa11.98□□□□□ -0.49
ABCF1-201ENST00000326195 ARMT1Q9H993 441 aa11.98□□□□□ -0.49
ABCF1-201ENST00000326195 POLR3GO15318 223 aaPredicted RBP11.97□□□□□ -0.49
ABCF1-201ENST00000326195 STX6O43752 255 aa11.97□□□□□ -0.49
ABCF1-201ENST00000326195 PPFIA3O75145 1194 aa11.97□□□□□ -0.49
ABCF1-201ENST00000326195 AK2P54819 239 aa11.97□□□□□ -0.49
ABCF1-201ENST00000326195 ERCC6LQ2NKX8 1250 aa11.97□□□□□ -0.49
ABCF1-201ENST00000326195 VPS53Q5VIR6 699 aa11.97□□□□□ -0.49
ABCF1-201ENST00000326195 CBX8Q9HC52 389 aa11.97□□□□□ -0.49
ABCF1-201ENST00000326195 ZCCHC17Q9NP64 241 aaKnown RBP11.97□□□□□ -0.49
ABCF1-201ENST00000326195 COL5A3P25940 1745 aaPredicted RBP11.97□□□□□ -0.49
ABCF1-201ENST00000326195 PRKAB2O43741 272 aa11.97□□□□□ -0.49
ABCF1-201ENST00000326195 TRIM5Q9C035 493 aa11.97□□□□□ -0.49
ABCF1-201ENST00000326195 TTF2Q9UNY4 1162 aaKnown RBP11.97□□□□□ -0.49
ABCF1-201ENST00000326195 RIC1Q4ADV7 1423 aa11.97□□□□□ -0.49
ABCF1-201ENST00000326195 AOX1Q06278 1338 aa11.97□□□□□ -0.49
ABCF1-201ENST00000326195 ZNF532Q9HCE3 1301 aa11.97□□□□□ -0.49
ABCF1-201ENST00000326195 LOC102724159A0A0B4J2E5 919 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 CLRN2A0PK11 232 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 MINDY4BA8MYZ0 360 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 ATP5JP18859 108 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 HSPA4P34932 840 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 STK3Q13188 491 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 PWP2Q15269 919 aaKnown RBP11.96□□□□□ -0.49
ABCF1-201ENST00000326195 RRP12Q5JTH9 1297 aaKnown RBP11.96□□□□□ -0.49
ABCF1-201ENST00000326195 LARP1BQ659C4 914 aaKnown RBP11.96□□□□□ -0.49
ABCF1-201ENST00000326195 STYK1Q6J9G0 422 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 ZNF589Q86UQ0 364 aaPredicted RBP11.96□□□□□ -0.49
ABCF1-201ENST00000326195 FERMT3Q86UX7 667 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 NIM1KQ8IY84 436 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 FAM200AQ8TCP9 573 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 SDR42E1Q8WUS8 393 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 H3BQV1 296 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 CCDC192P0DO97 292 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 LIG1P18858 919 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 FGFR2P21802 821 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 ZNF75DP51815 510 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 IFFO2Q5TF58 517 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 BLOC1S2Q6QNY1 142 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 PLA2G4DQ86XP0 818 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 EVI5LQ96CN4 794 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 SGIP1Q9BQI5 828 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 SAP30BPQ9UHR5 308 aaKnown RBP11.96□□□□□ -0.49
ABCF1-201ENST00000326195 SNX14Q9Y5W7 946 aa11.96□□□□□ -0.49
ABCF1-201ENST00000326195 TYRO3Q06418 890 aa11.96□□□□□ -0.5
ABCF1-201ENST00000326195 PRKG1Q13976 671 aa11.96□□□□□ -0.5
ABCF1-201ENST00000326195 NAA16Q6N069 864 aaPredicted RBP11.96□□□□□ -0.5
ABCF1-201ENST00000326195 C10orf67Q8IYJ2 551 aa11.96□□□□□ -0.5
ABCF1-201ENST00000326195 AIDAQ96BJ3 306 aa11.96□□□□□ -0.5
ABCF1-201ENST00000326195 ZSCAN31Q96LW9 406 aaPredicted RBP11.96□□□□□ -0.5
ABCF1-201ENST00000326195 PUS7LQ9H0K6 701 aaKnown RBP11.96□□□□□ -0.5
ABCF1-201ENST00000326195 VEZTQ9HBM0 779 aa11.96□□□□□ -0.5
ABCF1-201ENST00000326195 LEMD3Q9Y2U8 911 aa11.96□□□□□ -0.5
ABCF1-201ENST00000326195 RAD50Q92878 1312 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 RAD21O60216 631 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 F13A1P00488 732 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 LDHBP07195 334 aaKnown RBP11.95□□□□□ -0.5
ABCF1-201ENST00000326195 TNNT3P45378 269 aaPredicted RBP11.95□□□□□ -0.5
ABCF1-201ENST00000326195 MAP3K12Q12852 859 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 ANO6Q4KMQ2 910 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 PRAMEF18Q5VWM3 479 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 FAM173BQ6P4H8 233 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 ZSCAN29Q8IWY8 852 aaPredicted RBP11.95□□□□□ -0.5
ABCF1-201ENST00000326195 INCENPQ9NQS7 918 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 TTC41PQ6P2S7 1318 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 SMIM22K7EJ46 135 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 GJB2P29033 226 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 TGFB2P61812 414 aa11.95□□□□□ -0.5
ABCF1-201ENST00000326195 EYA3Q99504 573 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms