RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 APOBRQ0VD83 1088 aa10.1□□□□□ -0.79
CD28-201ENST00000324106 TTC16Q8NEE8 873 aa10.1□□□□□ -0.79
CD28-201ENST00000324106 BBXQ8WY36 941 aaPredicted RBP10.1□□□□□ -0.79
CD28-201ENST00000324106 DHX58Q96C10 678 aa10.1□□□□□ -0.79
CD28-201ENST00000324106 ADAMTSL3P82987 1691 aa10.1□□□□□ -0.79
CD28-201ENST00000324106 STX10O60499 249 aa10.1□□□□□ -0.79
CD28-201ENST00000324106 CCT6AP40227 531 aaKnown RBP10.1□□□□□ -0.79
CD28-201ENST00000324106 TAF3Q5VWG9 929 aa10.1□□□□□ -0.79
CD28-201ENST00000324106 MCF2L2Q86YR7 1114 aa10.1□□□□□ -0.79
CD28-201ENST00000324106 GINS2Q9Y248 185 aa10.1□□□□□ -0.79
CD28-201ENST00000324106 NR1I2O75469 434 aa10.1□□□□□ -0.79
CD28-201ENST00000324106 IGHDP01880 384 aa10.1□□□□□ -0.79
CD28-201ENST00000324106 PCP11498 1178 aaKnown RBP10.1□□□□□ -0.79
CD28-201ENST00000324106 BIRC3Q13489 604 aa10.1□□□□□ -0.79
CD28-201ENST00000324106 SPECC1Q5M775 1068 aa10.1□□□□□ -0.79
CD28-201ENST00000324106 RUFY3Q7L099 469 aa10.1□□□□□ -0.79
CD28-201ENST00000324106 MRPL11Q9Y3B7 192 aaKnown RBP10.1□□□□□ -0.79
CD28-201ENST00000324106 MROH2AA6NES4 1674 aa10.1□□□□□ -0.79
CD28-201ENST00000324106 AATKQ6ZMQ8 1374 aa10.1□□□□□ -0.79
CD28-201ENST00000324106 CASQ1P31415 396 aa10.1□□□□□ -0.79
CD28-201ENST00000324106 ZNF804BA4D1E1 1349 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 TFAP4Q01664 338 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 TTLL6Q8N841 843 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 LLPHQ9BRT6 129 aaKnown RBP10.09□□□□□ -0.79
CD28-201ENST00000324106 PAGR1Q9BTK6 254 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.09□□□□□ -0.79
CD28-201ENST00000324106 CCDC169A6NNP5 214 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 CFBP00751 764 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 KIAA1524Q8TCG1 905 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 IWS1Q96ST2 819 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 ZNF532Q9HCE3 1301 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 ERVV-1B6SEH8 477 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 POTEB2H3BUK9 544 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 ATP2A1O14983 1001 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 ADRA2BP18089 450 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 ATP5JP18859 108 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 MARCKSP29966 332 aaPredicted RBP10.09□□□□□ -0.79
CD28-201ENST00000324106 USP14P54578 494 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 TRPC3Q13507 836 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 SMC1AQ14683 1233 aaKnown RBP10.09□□□□□ -0.79
CD28-201ENST00000324106 UVSSAQ2YD98 709 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 TMC6Q7Z403 805 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 GLG1Q92896 1179 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 INTS4Q96HW7 963 aaKnown RBP10.09□□□□□ -0.79
CD28-201ENST00000324106 SELENOOQ9BVL4 669 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 ATP8A2Q9NTI2 1148 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 FAM135BQ49AJ0 1406 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 ERBB3P21860 1342 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 AFF2P51816 1311 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 ZBTB7BO15156 539 aaPredicted RBP10.09□□□□□ -0.79
CD28-201ENST00000324106 EPB41P11171 864 aaKnown RBP10.09□□□□□ -0.79
CD28-201ENST00000324106 OTUD6AQ7L8S5 288 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 ZKSCAN3Q9BRR0 538 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 PKD2L1Q9P0L9 805 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 METP08581 1390 aa10.09□□□□□ -0.79
CD28-201ENST00000324106 PRDM1O75626 825 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 URI1O94763 535 aaPredicted RBP10.08□□□□□ -0.8
CD28-201ENST00000324106 NPR1P16066 1061 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 DNA2P51530 1060 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 HLTFQ14527 1009 aaKnown RBP eCLIP10.08□□□□□ -0.8
CD28-201ENST00000324106 CERKLQ49MI3 558 aaPredicted RBP10.08□□□□□ -0.8
CD28-201ENST00000324106 GADL1Q6ZQY3 521 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 KCTD2Q14681 263 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 BRINP3Q76B58 766 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 PLEKHM2Q8IWE5 1019 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 PDCL2Q8N4E4 241 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 NEK11Q8NG66 645 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 KIFAP3Q92845 792 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 CCDC113Q9H0I3 377 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 RTEL1Q9NZ71 1219 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 OSBPP22059 807 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 ZAP70P43403 619 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 UBASH3AP57075 661 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 FAM47CQ5HY64 1035 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 SPOUT1Q5T280 376 aaKnown RBP10.08□□□□□ -0.8
CD28-201ENST00000324106 CHST3Q7LGC8 479 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 ANKRD35Q8N283 1001 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 IL17REQ8NFR9 667 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 CCDC102AQ96A19 550 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 MLXIPQ9HAP2 919 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 HAUS2Q9NVX0 235 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 PRKAG2Q9UGJ0 569 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 V9GY48 417 aaPredicted RBP10.08□□□□□ -0.8
CD28-201ENST00000324106 KDRP35968 1356 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 KDM5CP41229 1560 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 MYO5CQ9NQX4 1742 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 F13A1P00488 732 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 CLEC4GQ6UXB4 293 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 PIM2Q9P1W9 311 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 ASAP1Q9ULH1 1129 aa10.08□□□□□ -0.8
CD28-201ENST00000324106 SPATA31A3Q5VYP0 1347 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 H0YCG3 227 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 FERP16591 822 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 MRPS9P82933 396 aaKnown RBP10.07□□□□□ -0.8
CD28-201ENST00000324106 DOK7Q18PE1 504 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 AKNAD1Q5T1N1 836 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 DPH6Q7L8W6 267 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 REXO1Q8N1G1 1221 aaKnown RBP10.07□□□□□ -0.8
CD28-201ENST00000324106 RGS22Q8NE09 1264 aa10.07□□□□□ -0.8
CD28-201ENST00000324106 DNM3Q9UQ16 869 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms