RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 MYH1P12882 1939 aa37.03■■■■□ 3.52
NECTIN3-201ENST00000319792 USP17L12C9JPN9 530 aa37.03■■■■□ 3.52
NECTIN3-201ENST00000319792 USP17L21D6R901 530 aa37.03■■■■□ 3.52
NECTIN3-201ENST00000319792 MFSD6Q6ZSS7 791 aa37.03■■■■□ 3.52
NECTIN3-201ENST00000319792 TPCN1Q9ULQ1 816 aa37.03■■■■□ 3.52
NECTIN3-201ENST00000319792 MINDY4BA8MYZ0 360 aa37.02■■■■□ 3.52
NECTIN3-201ENST00000319792 SCNN1DP51172 638 aa37.02■■■■□ 3.52
NECTIN3-201ENST00000319792 ANTXR2P58335 489 aa37.02■■■■□ 3.52
NECTIN3-201ENST00000319792 TEX11Q8IYF3 940 aa37.02■■■■□ 3.52
NECTIN3-201ENST00000319792 VIL1P09327 827 aaKnown RBP37.01■■■■□ 3.52
NECTIN3-201ENST00000319792 PCP11498 1178 aaKnown RBP37.01■■■■□ 3.52
NECTIN3-201ENST00000319792 CRKP46108 304 aa37.01■■■■□ 3.52
NECTIN3-201ENST00000319792 KIAA0825Q8IV33 1275 aa37.01■■■■□ 3.52
NECTIN3-201ENST00000319792 ZDHHC15Q96MV8 337 aa37.01■■■■□ 3.52
NECTIN3-201ENST00000319792 LARP6Q9BRS8 491 aaKnown RBP37.01■■■■□ 3.52
NECTIN3-201ENST00000319792 KRT23Q9C075 422 aa37.01■■■■□ 3.52
NECTIN3-201ENST00000319792 LARGE1O95461 756 aa37■■■■□ 3.51
NECTIN3-201ENST00000319792 FGRP09769 529 aa37■■■■□ 3.51
NECTIN3-201ENST00000319792 TGFBRAP1Q8WUH2 860 aa37■■■■□ 3.51
NECTIN3-201ENST00000319792 PRC1O43663 620 aa37■■■■□ 3.51
NECTIN3-201ENST00000319792 RSBN1LQ6PCB5 846 aaPredicted RBP37■■■■□ 3.51
NECTIN3-201ENST00000319792 LRRC2Q9BYS8 371 aa37■■■■□ 3.51
NECTIN3-201ENST00000319792 FHDC1Q9C0D6 1143 aaPredicted RBP37■■■■□ 3.51
NECTIN3-201ENST00000319792 FOXD4L1Q9NU39 408 aa37■■■■□ 3.51
NECTIN3-201ENST00000319792 ME3Q16798 604 aa36.99■■■■□ 3.51
NECTIN3-201ENST00000319792 MCM9Q9NXL9 1143 aa36.99■■■■□ 3.51
NECTIN3-201ENST00000319792 SERPINA10Q9UK55 444 aa36.99■■■■□ 3.51
NECTIN3-201ENST00000319792 CIZ1Q9ULV3 898 aaPredicted RBP36.99■■■■□ 3.51
NECTIN3-201ENST00000319792 CYP2D7A0A087X1C5 515 aa36.98■■■■□ 3.51
NECTIN3-201ENST00000319792 B4E1Z4 1266 aa36.98■■■■□ 3.51
NECTIN3-201ENST00000319792 APOBEC3HQ6NTF7 200 aaKnown RBP36.98■■■■□ 3.51
NECTIN3-201ENST00000319792 ROBO3Q96MS0 1386 aa36.97■■■■□ 3.51
NECTIN3-201ENST00000319792 PSMD14O00487 310 aa36.97■■■■□ 3.51
NECTIN3-201ENST00000319792 FGD1P98174 961 aa36.97■■■■□ 3.51
NECTIN3-201ENST00000319792 CHST3Q7LGC8 479 aa36.97■■■■□ 3.51
NECTIN3-201ENST00000319792 NKX2-3Q8TAU0 364 aa36.97■■■■□ 3.51
NECTIN3-201ENST00000319792 BRF1Q92994 677 aa36.97■■■■□ 3.51
NECTIN3-201ENST00000319792 GMLQ99445 158 aa36.97■■■■□ 3.51
NECTIN3-201ENST00000319792 CWC22Q9HCG8 908 aaKnown RBP36.97■■■■□ 3.51
NECTIN3-201ENST00000319792 INCENPQ9NQS7 918 aa36.97■■■■□ 3.51
NECTIN3-201ENST00000319792 FLT1P17948 1338 aa36.97■■■■□ 3.51
NECTIN3-201ENST00000319792 RAD17O75943 681 aa36.96■■■■□ 3.51
NECTIN3-201ENST00000319792 C12orf60Q5U649 245 aa36.96■■■■□ 3.51
NECTIN3-201ENST00000319792 CYB5R4Q7L1T6 521 aa36.96■■■■□ 3.51
NECTIN3-201ENST00000319792 USP17L8P0C7I0 530 aa36.95■■■■□ 3.51
NECTIN3-201ENST00000319792 EVCP57679 992 aa36.95■■■■□ 3.51
NECTIN3-201ENST00000319792 MAPKAPK5Q8IW41 473 aa36.95■■■■□ 3.51
NECTIN3-201ENST00000319792 CHMP5Q9NZZ3 219 aa36.95■■■■□ 3.51
NECTIN3-201ENST00000319792 SMIM22K7EJ46 135 aa36.95■■■■□ 3.5
NECTIN3-201ENST00000319792 CYP2D6P10635 497 aa36.95■■■■□ 3.5
NECTIN3-201ENST00000319792 JDP2Q8WYK2 163 aa36.95■■■■□ 3.5
NECTIN3-201ENST00000319792 DDX52Q9Y2R4 599 aaKnown RBP eCLIP36.95■■■■□ 3.5
NECTIN3-201ENST00000319792 SLC3A2P08195 630 aaKnown RBP36.94■■■■□ 3.5
NECTIN3-201ENST00000319792 MTA3Q9BTC8 594 aa36.94■■■■□ 3.5
NECTIN3-201ENST00000319792 KDM4AO75164 1064 aa36.93■■■■□ 3.5
NECTIN3-201ENST00000319792 ST3GAL1Q11201 340 aa36.93■■■■□ 3.5
NECTIN3-201ENST00000319792 CDC42EP5Q6NZY7 148 aa36.93■■■■□ 3.5
NECTIN3-201ENST00000319792 AMOTL1Q8IY63 956 aa36.93■■■■□ 3.5
NECTIN3-201ENST00000319792 TMEM87BQ96K49 555 aa36.93■■■■□ 3.5
NECTIN3-201ENST00000319792 USP40Q9NVE5 1235 aa36.93■■■■□ 3.5
NECTIN3-201ENST00000319792 DICER1Q9UPY3 1922 aaKnown RBP36.92■■■■□ 3.5
NECTIN3-201ENST00000319792 ORC4O43929 436 aa36.92■■■■□ 3.5
NECTIN3-201ENST00000319792 WDHD1O75717 1129 aaPredicted RBP36.92■■■■□ 3.5
NECTIN3-201ENST00000319792 ZSWIM5Q9P217 1185 aa36.92■■■■□ 3.5
NECTIN3-201ENST00000319792 RASSF7Q02833 373 aa36.91■■■■□ 3.5
NECTIN3-201ENST00000319792 CXCL9Q07325 125 aa36.91■■■■□ 3.5
NECTIN3-201ENST00000319792 AGBL3Q8NEM8 1001 aa36.91■■■■□ 3.5
NECTIN3-201ENST00000319792 NT5C2P49902 561 aa36.9■■■■□ 3.5
NECTIN3-201ENST00000319792 EVX2Q03828 476 aa36.9■■■■□ 3.5
NECTIN3-201ENST00000319792 SH2B2O14492 632 aaPredicted RBP36.9■■■■□ 3.5
NECTIN3-201ENST00000319792 APOBRQ0VD83 1088 aa36.9■■■■□ 3.5
NECTIN3-201ENST00000319792 ESR2Q92731 530 aa36.9■■■■□ 3.5
NECTIN3-201ENST00000319792 ZNF274Q96GC6 653 aaPredicted RBP36.9■■■■□ 3.5
NECTIN3-201ENST00000319792 ANGEL1Q9UNK9 670 aaKnown RBP36.9■■■■□ 3.5
NECTIN3-201ENST00000319792 ZSCAN21Q9Y5A6 473 aaPredicted RBP36.9■■■■□ 3.5
NECTIN3-201ENST00000319792 PRELPP51888 382 aa36.89■■■■□ 3.5
NECTIN3-201ENST00000319792 RRP12Q5JTH9 1297 aaKnown RBP36.89■■■■□ 3.5
NECTIN3-201ENST00000319792 CIAPIN1Q6FI81 312 aa36.89■■■■□ 3.5
NECTIN3-201ENST00000319792 CCDC83Q8IWF9 413 aa36.89■■■■□ 3.5
NECTIN3-201ENST00000319792 GPHNQ9NQX3 736 aaPredicted RBP36.89■■■■□ 3.5
NECTIN3-201ENST00000319792 TOMM22Q9NS69 142 aa36.89■■■■□ 3.5
NECTIN3-201ENST00000319792 IGDCC4Q8TDY8 1250 aa36.88■■■■□ 3.49
NECTIN3-201ENST00000319792 PFKFB2O60825 505 aa36.87■■■■□ 3.49
NECTIN3-201ENST00000319792 PDE4BQ07343 736 aa36.87■■■■□ 3.49
NECTIN3-201ENST00000319792 STK11IPQ8N1F8 1099 aa36.87■■■■□ 3.49
NECTIN3-201ENST00000319792 NECAB1Q8N987 351 aa36.87■■■■□ 3.49
NECTIN3-201ENST00000319792 GTF3C6Q969F1 213 aa36.87■■■■□ 3.49
NECTIN3-201ENST00000319792 SYT17Q9BSW7 474 aa36.87■■■■□ 3.49
NECTIN3-201ENST00000319792 SBF1O95248 1867 aa36.86■■■■□ 3.49
NECTIN3-201ENST00000319792 POLR3DP05423 398 aaPredicted RBP36.86■■■■□ 3.49
NECTIN3-201ENST00000319792 CFAP100Q494V2 611 aa36.86■■■■□ 3.49
NECTIN3-201ENST00000319792 SAP30BPQ9UHR5 308 aaKnown RBP36.86■■■■□ 3.49
NECTIN3-201ENST00000319792 HDAC9Q9UKV0 1011 aa36.86■■■■□ 3.49
NECTIN3-201ENST00000319792 PCDHAC2Q9Y5I4 1007 aa36.86■■■■□ 3.49
NECTIN3-201ENST00000319792 NPM3O75607 178 aaKnown RBP36.85■■■■□ 3.49
NECTIN3-201ENST00000319792 RBM5P52756 815 aaKnown RBP eCLIP36.85■■■■□ 3.49
NECTIN3-201ENST00000319792 TNIP1Q15025 636 aa36.85■■■■□ 3.49
NECTIN3-201ENST00000319792 DDX4Q9NQI0 724 aaKnown RBP36.85■■■■□ 3.49
NECTIN3-201ENST00000319792 LIFRP42702 1097 aa36.85■■■■□ 3.49
NECTIN3-201ENST00000319792 IDI2Q9BXS1 227 aa36.85■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms