RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 ZNF341Q9BYN7 854 aa19.64■□□□□ 0.73
HDDC2-201ENST00000318787 UNCXA6NJT0 531 aa19.63■□□□□ 0.73
HDDC2-201ENST00000318787 IDH1O75874 414 aaKnown RBP19.63■□□□□ 0.73
HDDC2-201ENST00000318787 GJA5P36382 358 aa19.63■□□□□ 0.73
HDDC2-201ENST00000318787 TM4SF4P48230 202 aa19.63■□□□□ 0.73
HDDC2-201ENST00000318787 PIH1D3Q9NQM4 214 aaKnown RBP19.63■□□□□ 0.73
HDDC2-201ENST00000318787 GPR75-ASB3A0A0A6YYF3 556 aa19.62■□□□□ 0.73
HDDC2-201ENST00000318787 RRP1P56182 461 aaKnown RBP19.62■□□□□ 0.73
HDDC2-201ENST00000318787 FAM163AQ96GL9 167 aaPredicted RBP19.62■□□□□ 0.73
HDDC2-201ENST00000318787 DDX4Q9NQI0 724 aaKnown RBP19.62■□□□□ 0.73
HDDC2-201ENST00000318787 AATFQ9NY61 560 aaKnown RBP eCLIP19.62■□□□□ 0.73
HDDC2-201ENST00000318787 RAB11FIP3O75154 756 aa19.61■□□□□ 0.73
HDDC2-201ENST00000318787 ENTPD3O75355 529 aa19.61■□□□□ 0.73
HDDC2-201ENST00000318787 WDHD1O75717 1129 aaPredicted RBP19.61■□□□□ 0.73
HDDC2-201ENST00000318787 INPP5BP32019 993 aa19.61■□□□□ 0.73
HDDC2-201ENST00000318787 TEX11Q8IYF3 940 aa19.61■□□□□ 0.73
HDDC2-201ENST00000318787 ZNF512BQ96KM6 892 aaPredicted RBP19.61■□□□□ 0.73
HDDC2-201ENST00000318787 IDI2Q9BXS1 227 aa19.61■□□□□ 0.73
HDDC2-201ENST00000318787 FOCADQ5VW36 1801 aa19.6■□□□□ 0.73
HDDC2-201ENST00000318787 DGKZQ13574 1117 aa19.6■□□□□ 0.73
HDDC2-201ENST00000318787 IFNL1Q8IU54 200 aa19.6■□□□□ 0.73
HDDC2-201ENST00000318787 SH3RF3Q8TEJ3 882 aaPredicted RBP19.6■□□□□ 0.73
HDDC2-201ENST00000318787 DNAJC2Q99543 621 aaKnown RBP19.6■□□□□ 0.73
HDDC2-201ENST00000318787 SNCAIPQ9Y6H5 919 aa19.6■□□□□ 0.73
HDDC2-201ENST00000318787 RFX7Q2KHR2 1363 aa19.6■□□□□ 0.73
HDDC2-201ENST00000318787 DDTLA6NHG4 134 aaPredicted RBP19.59■□□□□ 0.73
HDDC2-201ENST00000318787 BAG3O95817 575 aa19.59■□□□□ 0.73
HDDC2-201ENST00000318787 INHBEP58166 350 aa19.59■□□□□ 0.73
HDDC2-201ENST00000318787 RHBDL3P58872 404 aa19.59■□□□□ 0.73
HDDC2-201ENST00000318787 ABHD8Q96I13 439 aa19.59■□□□□ 0.73
HDDC2-201ENST00000318787 ANTXR1Q9H6X2 564 aa19.59■□□□□ 0.73
HDDC2-201ENST00000318787 DOCK1Q14185 1865 aa19.58■□□□□ 0.73
HDDC2-201ENST00000318787 IGF2BP3O00425 579 aaKnown RBP eCLIP19.58■□□□□ 0.73
HDDC2-201ENST00000318787 SMARCA5O60264 1052 aaPredicted RBP19.58■□□□□ 0.73
HDDC2-201ENST00000318787 SLURP2P0DP57 97 aa19.58■□□□□ 0.73
HDDC2-201ENST00000318787 CYP7A1P22680 504 aa19.58■□□□□ 0.73
HDDC2-201ENST00000318787 OTUD7BQ6GQQ9 843 aa19.58■□□□□ 0.73
HDDC2-201ENST00000318787 SH3BP5LQ7L8J4 393 aa19.58■□□□□ 0.73
HDDC2-201ENST00000318787 ADGRA1Q86SQ6 560 aa19.58■□□□□ 0.73
HDDC2-201ENST00000318787 LRRCC1Q9C099 1032 aa19.58■□□□□ 0.73
HDDC2-201ENST00000318787 ATAD5Q96QE3 1844 aa19.58■□□□□ 0.73
HDDC2-201ENST00000318787 CCL15-CCL14A0A0B4J2E2 113 aa19.57■□□□□ 0.72
HDDC2-201ENST00000318787 SPDYE5A6NIY4 337 aa19.57■□□□□ 0.72
HDDC2-201ENST00000318787 ALDH1A1P00352 501 aa19.57■□□□□ 0.72
HDDC2-201ENST00000318787 CCL15Q16663 113 aa19.57■□□□□ 0.72
HDDC2-201ENST00000318787 ERO1BQ86YB8 467 aa19.57■□□□□ 0.72
HDDC2-201ENST00000318787 MAGEB6Q8N7X4 407 aa19.57■□□□□ 0.72
HDDC2-201ENST00000318787 MIGA1Q8NAN2 632 aa19.57■□□□□ 0.72
HDDC2-201ENST00000318787 MYH1P12882 1939 aa19.57■□□□□ 0.72
HDDC2-201ENST00000318787 FAM196BA6NMK8 535 aa19.57■□□□□ 0.72
HDDC2-201ENST00000318787 GTF2A2P52657 109 aa19.57■□□□□ 0.72
HDDC2-201ENST00000318787 MAP3K12Q12852 859 aa19.57■□□□□ 0.72
HDDC2-201ENST00000318787 ZNF296Q8WUU4 475 aaPredicted RBP19.57■□□□□ 0.72
HDDC2-201ENST00000318787 MCOLN1Q9GZU1 580 aa19.57■□□□□ 0.72
HDDC2-201ENST00000318787 MYH7P12883 1935 aa19.56■□□□□ 0.72
HDDC2-201ENST00000318787 GOLIM4O00461 696 aa19.56■□□□□ 0.72
HDDC2-201ENST00000318787 PLCG2P16885 1265 aa19.56■□□□□ 0.72
HDDC2-201ENST00000318787 DYNLL1P63167 89 aaKnown RBP19.56■□□□□ 0.72
HDDC2-201ENST00000318787 SLC4A8Q2Y0W8 1093 aa19.56■□□□□ 0.72
HDDC2-201ENST00000318787 MAPKAPK5Q8IW41 473 aa19.56■□□□□ 0.72
HDDC2-201ENST00000318787 TGFBRAP1Q8WUH2 860 aa19.56■□□□□ 0.72
HDDC2-201ENST00000318787 CRBNQ96SW2 442 aa19.56■□□□□ 0.72
HDDC2-201ENST00000318787 OSBPL5Q9H0X9 879 aaPredicted RBP19.56■□□□□ 0.72
HDDC2-201ENST00000318787 R3HDMLQ9H3Y0 253 aa19.56■□□□□ 0.72
HDDC2-201ENST00000318787 GPR25O00155 361 aa19.55■□□□□ 0.72
HDDC2-201ENST00000318787 IRF6O14896 467 aa19.55■□□□□ 0.72
HDDC2-201ENST00000318787 BOLA2Q9H3K6 86 aa19.55■□□□□ 0.72
HDDC2-201ENST00000318787 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.55■□□□□ 0.72
HDDC2-201ENST00000318787 PPIL2Q13356 520 aa19.54■□□□□ 0.72
HDDC2-201ENST00000318787 TTF1Q15361 905 aaPredicted RBP19.54■□□□□ 0.72
HDDC2-201ENST00000318787 BRI3BPQ8WY22 251 aa19.54■□□□□ 0.72
HDDC2-201ENST00000318787 EDC3Q96F86 508 aaKnown RBP19.54■□□□□ 0.72
HDDC2-201ENST00000318787 MS4A4AQ96JQ5 239 aa19.54■□□□□ 0.72
HDDC2-201ENST00000318787 PTPN18Q99952 460 aa19.54■□□□□ 0.72
HDDC2-201ENST00000318787 PICK1Q9NRD5 415 aa19.54■□□□□ 0.72
HDDC2-201ENST00000318787 CCDC85CA6NKD9 419 aa19.53■□□□□ 0.72
HDDC2-201ENST00000318787 MAP4K4O95819 1239 aaPredicted RBP19.53■□□□□ 0.72
HDDC2-201ENST00000318787 CETPP11597 493 aa19.53■□□□□ 0.72
HDDC2-201ENST00000318787 CRHR2Q13324 411 aa19.53■□□□□ 0.72
HDDC2-201ENST00000318787 SNAPC2Q13487 334 aa19.53■□□□□ 0.72
HDDC2-201ENST00000318787 TAF1CQ15572 869 aaPredicted RBP19.53■□□□□ 0.72
HDDC2-201ENST00000318787 SAP30BPQ9UHR5 308 aaKnown RBP19.53■□□□□ 0.72
HDDC2-201ENST00000318787 ZNF112Q9UJU3 913 aa19.53■□□□□ 0.72
HDDC2-201ENST00000318787 NAV1Q8NEY1 1877 aa19.53■□□□□ 0.72
HDDC2-201ENST00000318787 ATRNL1Q5VV63 1379 aa19.53■□□□□ 0.72
HDDC2-201ENST00000318787 SIPA1L1O43166 1804 aa19.53■□□□□ 0.72
HDDC2-201ENST00000318787 FKTNO75072 461 aa19.52■□□□□ 0.72
HDDC2-201ENST00000318787 USP5P45974 858 aa19.52■□□□□ 0.72
HDDC2-201ENST00000318787 PPATQ06203 517 aa19.52■□□□□ 0.72
HDDC2-201ENST00000318787 SCYL3Q8IZE3 742 aa19.52■□□□□ 0.72
HDDC2-201ENST00000318787 TRIM34Q9BYJ4 488 aa19.52■□□□□ 0.72
HDDC2-201ENST00000318787 FLT1P17948 1338 aa19.51■□□□□ 0.71
HDDC2-201ENST00000318787 SLC9C2Q5TAH2 1124 aa19.51■□□□□ 0.71
HDDC2-201ENST00000318787 CTU1Q7Z7A3 348 aaKnown RBP19.51■□□□□ 0.71
HDDC2-201ENST00000318787 FAM43AQ8N2R8 423 aa19.51■□□□□ 0.71
HDDC2-201ENST00000318787 CRACR2BQ8N4Y2 399 aaPredicted RBP19.51■□□□□ 0.71
HDDC2-201ENST00000318787 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.51■□□□□ 0.71
HDDC2-201ENST00000318787 PCDHB15Q9Y5E8 787 aa19.51■□□□□ 0.71
HDDC2-201ENST00000318787 PHIPQ8WWQ0 1821 aa19.51■□□□□ 0.71
HDDC2-201ENST00000318787 TESPA1A2RU30 521 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms