RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 TRPA1O75762 1119 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 UIMC1Q96RL1 719 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.72□□□□□ -0.85
USF3-201ENST00000316407 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.72□□□□□ -0.85
USF3-201ENST00000316407 EHMT1Q9H9B1 1298 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 ZKSCAN8Q15776 578 aaPredicted RBP9.72□□□□□ -0.85
USF3-201ENST00000316407 CASC4Q6P4E1 433 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 VPS37BQ9H9H4 285 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 NPHP3Q7Z494 1330 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 ARAP1Q96P48 1450 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 KRT2P35908 639 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 KLHL14Q9P2G3 628 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 ATP2B3Q16720 1220 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 CFAP221Q4G0U5 840 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 ZBBXA8MT70 800 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 IFNAR2P48551 515 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 PNOCQ13519 176 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 SLC4A7Q9Y6M7 1214 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 NAPAP54920 295 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 ANKRD20A3Q5VUR7 823 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 HAUS7Q99871 368 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 PDHA1P08559 390 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 ADCY1Q08828 1119 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 FAM173BQ6P4H8 233 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 TRMT44Q8IYL2 757 aaKnown RBP9.72□□□□□ -0.85
USF3-201ENST00000316407 CCDC89Q8N998 374 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 POLKQ9UBT6 870 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 PPME1Q9Y570 386 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 TRPC3Q13507 836 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 IMPG2Q9BZV3 1241 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 PHEXP78562 749 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 TYW1BQ6NUM6 668 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 SCYL3Q8IZE3 742 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 IRAK4Q9NWZ3 460 aa9.72□□□□□ -0.85
USF3-201ENST00000316407 BSPRYQ5W0U4 402 aa9.71□□□□□ -0.85
USF3-201ENST00000316407 CEP70Q8NHQ1 597 aa9.71□□□□□ -0.85
USF3-201ENST00000316407 PRPF31Q8WWY3 499 aaKnown RBP9.71□□□□□ -0.85
USF3-201ENST00000316407 MAP3K1Q13233 1512 aa9.71□□□□□ -0.85
USF3-201ENST00000316407 HDAC1Q13547 482 aaPredicted RBP9.71□□□□□ -0.85
USF3-201ENST00000316407 CCDC13Q8IYE1 715 aa9.71□□□□□ -0.85
USF3-201ENST00000316407 PALMDQ9NP74 551 aa9.71□□□□□ -0.85
USF3-201ENST00000316407 TBC1D7Q9P0N9 293 aa9.71□□□□□ -0.85
USF3-201ENST00000316407 ZBTB22O15209 634 aa9.71□□□□□ -0.85
USF3-201ENST00000316407 RANBP1P43487 201 aa9.71□□□□□ -0.85
USF3-201ENST00000316407 IQSEC3Q9UPP2 1182 aaPredicted RBP9.71□□□□□ -0.85
USF3-201ENST00000316407 RTEL1-TNFRSF6BF6WH68 1400 aa9.71□□□□□ -0.85
USF3-201ENST00000316407 PTPRCP08575 1304 aa9.71□□□□□ -0.85
USF3-201ENST00000316407 GPTP24298 496 aa9.71□□□□□ -0.85
USF3-201ENST00000316407 SLC4A4Q9Y6R1 1079 aa9.71□□□□□ -0.85
USF3-201ENST00000316407 EFCAB13Q8IY85 973 aa9.71□□□□□ -0.85
USF3-201ENST00000316407 KRT10P13645 584 aa9.71□□□□□ -0.86
USF3-201ENST00000316407 TBC1D8BQ0IIM8 1120 aa9.71□□□□□ -0.86
USF3-201ENST00000316407 ADAT2Q7Z6V5 191 aaKnown RBP9.71□□□□□ -0.86
USF3-201ENST00000316407 DCLK2Q8N568 766 aa9.71□□□□□ -0.86
USF3-201ENST00000316407 NUDCD3Q8IVD9 361 aa9.71□□□□□ -0.86
USF3-201ENST00000316407 NCOA5Q9HCD5 579 aaKnown RBP9.71□□□□□ -0.86
USF3-201ENST00000316407 MBIPQ9NS73 344 aa9.71□□□□□ -0.86
USF3-201ENST00000316407 A6NNZ2 444 aa9.71□□□□□ -0.86
USF3-201ENST00000316407 TUBB8Q3ZCM7 444 aa9.71□□□□□ -0.86
USF3-201ENST00000316407 PHLDB3Q6NSJ2 640 aa9.71□□□□□ -0.86
USF3-201ENST00000316407 PKD2L1Q9P0L9 805 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 ABCC11Q96J66 1382 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 RCN2Q14257 317 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 MTMR3Q13615 1198 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 CFAP61Q8NHU2 1237 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 XPO4Q9C0E2 1151 aaKnown RBP9.7□□□□□ -0.86
USF3-201ENST00000316407 YY1AP1Q9H869 796 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 TTLL3Q9Y4R7 772 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 PCF11O94913 1555 aaKnown RBP9.7□□□□□ -0.86
USF3-201ENST00000316407 TSPY3P0CV98 308 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 TSPY8P0CW00 308 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 PPP1R12AO14974 1030 aaPredicted RBP9.7□□□□□ -0.86
USF3-201ENST00000316407 ZNF174Q15697 407 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 FAM71BQ8TC56 605 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 SAR1BQ9Y6B6 198 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 RNF40O75150 1001 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 GYS2P54840 703 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 TNNQ9UQP3 1299 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 ANXA1P04083 346 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 FAN1Q9Y2M0 1017 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 TRAF5O00463 557 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 HFM1A2PYH4 1435 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 NUB1Q9Y5A7 615 aa9.7□□□□□ -0.86
USF3-201ENST00000316407 NBPF7P0C2Y1 421 aaPredicted RBP9.69□□□□□ -0.86
USF3-201ENST00000316407 INPP1P49441 399 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 PEX26Q7Z412 305 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 BRAPQ7Z569 592 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 ZKSCAN3Q9BRR0 538 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 MSH6P52701 1360 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 C2CD5Q86YS7 1000 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 DYDC2Q96IM9 177 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 TSC22D3Q99576 134 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 Q9H521 79 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 SP4Q02446 784 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 EMILIN1Q9Y6C2 1016 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 IL1RL1Q01638 556 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 TMOD2Q9NZR1 351 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 ARHGAP6O43182 974 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 C16orf87Q6PH81 154 aa9.69□□□□□ -0.86
USF3-201ENST00000316407 UHMK1Q8TAS1 419 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 257.4 ms