RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ZNF592Q92610 1267 aa8.87□□□□□ -0.99
TRIM55-202ENST00000315962 SPATA32Q96LK8 384 aa8.87□□□□□ -0.99
TRIM55-202ENST00000315962 ORC3Q9UBD5 711 aaPredicted RBP8.87□□□□□ -0.99
TRIM55-202ENST00000315962 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.87□□□□□ -0.99
TRIM55-202ENST00000315962 ANGEL1Q9UNK9 670 aaKnown RBP8.87□□□□□ -0.99
TRIM55-202ENST00000315962 V9GYY5 206 aaPredicted RBP8.87□□□□□ -0.99
TRIM55-202ENST00000315962 MYO5AQ9Y4I1 1855 aaKnown RBP8.87□□□□□ -0.99
TRIM55-202ENST00000315962 GOLGA6L4A6NEF3 574 aa8.87□□□□□ -0.99
TRIM55-202ENST00000315962 MMP10P09238 476 aa8.87□□□□□ -0.99
TRIM55-202ENST00000315962 USP17L8P0C7I0 530 aa8.87□□□□□ -0.99
TRIM55-202ENST00000315962 EN1Q05925 392 aaPredicted RBP8.87□□□□□ -0.99
TRIM55-202ENST00000315962 GRAPQ13588 217 aa8.87□□□□□ -0.99
TRIM55-202ENST00000315962 DOK7Q18PE1 504 aa8.87□□□□□ -0.99
TRIM55-202ENST00000315962 FBXO33Q7Z6M2 555 aa8.87□□□□□ -0.99
TRIM55-202ENST00000315962 GRAPLQ8TC17 118 aaPredicted RBP8.87□□□□□ -0.99
TRIM55-202ENST00000315962 ZNF622Q969S3 477 aaKnown RBP eCLIP8.87□□□□□ -0.99
TRIM55-202ENST00000315962 NSUN4Q96CB9 384 aaKnown RBP8.87□□□□□ -0.99
TRIM55-202ENST00000315962 NACAP1Q9BZK3 213 aa8.87□□□□□ -0.99
TRIM55-202ENST00000315962 POLLQ9UGP5 575 aa8.87□□□□□ -0.99
TRIM55-202ENST00000315962 SAP30BPQ9UHR5 308 aaKnown RBP8.87□□□□□ -0.99
TRIM55-202ENST00000315962 ATRNO75882 1429 aa8.87□□□□□ -0.99
TRIM55-202ENST00000315962 BTAF1O14981 1849 aa8.86□□□□□ -0.99
TRIM55-202ENST00000315962 WNK3Q9BYP7 1800 aa8.86□□□□□ -0.99
TRIM55-202ENST00000315962 SLURP2P0DP57 97 aa8.86□□□□□ -0.99
TRIM55-202ENST00000315962 ATP2B1P20020 1258 aa8.86□□□□□ -0.99
TRIM55-202ENST00000315962 PDCP20941 246 aa8.86□□□□□ -0.99
TRIM55-202ENST00000315962 METAP2P50579 478 aaKnown RBP eCLIP8.86□□□□□ -0.99
TRIM55-202ENST00000315962 UBE2HP62256 183 aa8.86□□□□□ -0.99
TRIM55-202ENST00000315962 KRT85P78386 507 aa8.86□□□□□ -0.99
TRIM55-202ENST00000315962 ST5P78524 1137 aa8.86□□□□□ -0.99
TRIM55-202ENST00000315962 PPARAQ07869 468 aa8.86□□□□□ -0.99
TRIM55-202ENST00000315962 AKNAD1Q5T1N1 836 aa8.86□□□□□ -0.99
TRIM55-202ENST00000315962 IGDCC4Q8TDY8 1250 aa8.86□□□□□ -0.99
TRIM55-202ENST00000315962 RIOK1Q9BRS2 568 aaKnown RBP8.86□□□□□ -0.99
TRIM55-202ENST00000315962 KCNQ5Q9NR82 932 aa8.86□□□□□ -0.99
TRIM55-202ENST00000315962 ATP6V1DQ9Y5K8 247 aa8.86□□□□□ -0.99
TRIM55-202ENST00000315962 POLRMTO00411 1230 aaKnown RBP8.86□□□□□ -0.99
TRIM55-202ENST00000315962 GUCY1A2P33402 732 aa8.86□□□□□ -0.99
TRIM55-202ENST00000315962 TERF1P54274 439 aa8.86□□□□□ -0.99
TRIM55-202ENST00000315962 APOA5Q6Q788 366 aa8.86□□□□□ -0.99
TRIM55-202ENST00000315962 DYNLL2Q96FJ2 89 aa8.86□□□□□ -0.99
TRIM55-202ENST00000315962 CCDC94Q9BW85 323 aaPredicted RBP8.86□□□□□ -0.99
TRIM55-202ENST00000315962 KIF3AQ9Y496 699 aa8.86□□□□□ -0.99
TRIM55-202ENST00000315962 SLC12A7Q9Y666 1083 aa8.86□□□□□ -0.99
TRIM55-202ENST00000315962 RXRBP28702 533 aa8.85□□□□□ -0.99
TRIM55-202ENST00000315962 RBM6P78332 1123 aaKnown RBP8.85□□□□□ -0.99
TRIM55-202ENST00000315962 ARID5BQ14865 1188 aa8.85□□□□□ -0.99
TRIM55-202ENST00000315962 SLC44A5Q8NCS7 719 aa8.85□□□□□ -0.99
TRIM55-202ENST00000315962 BICD2Q8TD16 824 aa8.85□□□□□ -0.99
TRIM55-202ENST00000315962 MCM9Q9NXL9 1143 aa8.85□□□□□ -0.99
TRIM55-202ENST00000315962 CCDC69A6NI79 296 aa8.85□□□□□ -0.99
TRIM55-202ENST00000315962 CCDC186Q7Z3E2 898 aa8.85□□□□□ -0.99
TRIM55-202ENST00000315962 ZNF274Q96GC6 653 aaPredicted RBP8.85□□□□□ -0.99
TRIM55-202ENST00000315962 USP28Q96RU2 1077 aa8.85□□□□□ -0.99
TRIM55-202ENST00000315962 SLC26A6Q9BXS9 759 aa8.85□□□□□ -0.99
TRIM55-202ENST00000315962 AGXT2Q9BYV1 514 aa8.85□□□□□ -0.99
TRIM55-202ENST00000315962 ANKRD2Q9GZV1 360 aa8.85□□□□□ -0.99
TRIM55-202ENST00000315962 ALDH8A1Q9H2A2 487 aaPredicted RBP8.85□□□□□ -0.99
TRIM55-202ENST00000315962 LY9Q9HBG7 655 aa8.85□□□□□ -0.99
TRIM55-202ENST00000315962 SPEF2Q9C093 1822 aa8.85□□□□□ -0.99
TRIM55-202ENST00000315962 AKAP11Q9UKA4 1901 aa8.85□□□□□ -0.99
TRIM55-202ENST00000315962 SH2B2O14492 632 aaPredicted RBP8.84□□□□□ -0.99
TRIM55-202ENST00000315962 ZBTB43O43298 467 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 CHRNA5P30532 468 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 EZH2Q15910 746 aaKnown RBP8.84□□□□□ -0.99
TRIM55-202ENST00000315962 CTR9Q6PD62 1173 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 POTEAQ6S8J7 498 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 SH3RF3Q8TEJ3 882 aaPredicted RBP8.84□□□□□ -0.99
TRIM55-202ENST00000315962 TGFBRAP1Q8WUH2 860 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 LEO1Q8WVC0 666 aaPredicted RBP8.84□□□□□ -0.99
TRIM55-202ENST00000315962 PGBD1Q96JS3 809 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 C8orf76Q96K31 380 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 MAP7D2Q96T17 732 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 UBAC1Q9BSL1 405 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 DACT1Q9NYF0 836 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 RTL9Q8NET4 1388 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 GOLGA8AA7E2F4 631 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 KIF28PB7ZC32 967 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 NR1I2O75469 434 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 LDHBP07195 334 aaKnown RBP8.84□□□□□ -0.99
TRIM55-202ENST00000315962 GTF2IP78347 998 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 ANO6Q4KMQ2 910 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 RASGRP2Q7LDG7 609 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 DEFB132Q7Z7B7 95 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 MAPKAPK5Q8IW41 473 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 SMARCC2Q8TAQ2 1214 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 KCNJ14Q9UNX9 436 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 USP5P45974 858 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 ME1P48163 572 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 SCNN1DP51172 638 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 RESTQ13127 1097 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 MFSD14BQ5SR56 506 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 PDCL2Q8N4E4 241 aa8.84□□□□□ -0.99
TRIM55-202ENST00000315962 DCP1AQ9NPI6 582 aaPredicted RBP8.84□□□□□ -0.99
TRIM55-202ENST00000315962 MYH3P11055 1940 aa8.83□□□□□ -1
TRIM55-202ENST00000315962 DDX60Q8IY21 1712 aaKnown RBP8.83□□□□□ -1
TRIM55-202ENST00000315962 ANKRD36CQ5JPF3 1778 aa8.83□□□□□ -1
TRIM55-202ENST00000315962 ZSCAN20P17040 1043 aaPredicted RBP8.83□□□□□ -1
TRIM55-202ENST00000315962 MARCKSP29966 332 aaPredicted RBP8.83□□□□□ -1
TRIM55-202ENST00000315962 PICALMQ13492 652 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms