RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 ZNF408Q9H9D4 720 aa9.56□□□□□ -0.88
CDC42-201ENST00000315554 PAG1Q9NWQ8 432 aa9.56□□□□□ -0.88
CDC42-201ENST00000315554 ZNF70Q9UC06 446 aaPredicted RBP9.56□□□□□ -0.88
CDC42-201ENST00000315554 PGAP2Q9UHJ9 254 aa9.56□□□□□ -0.88
CDC42-201ENST00000315554 SALL3Q9BXA9 1300 aa9.56□□□□□ -0.88
CDC42-201ENST00000315554 PDE4AP27815 886 aa9.55□□□□□ -0.88
CDC42-201ENST00000315554 BTDP43251 543 aa9.55□□□□□ -0.88
CDC42-201ENST00000315554 PDE1AP54750 535 aa9.55□□□□□ -0.88
CDC42-201ENST00000315554 HTRA3P83110 453 aa9.55□□□□□ -0.88
CDC42-201ENST00000315554 HDLBPQ00341 1268 aaKnown RBP9.55□□□□□ -0.88
CDC42-201ENST00000315554 FSTL1Q12841 308 aa9.55□□□□□ -0.88
CDC42-201ENST00000315554 NAA16Q6N069 864 aaPredicted RBP9.55□□□□□ -0.88
CDC42-201ENST00000315554 GPR153Q6NV75 609 aa9.55□□□□□ -0.88
CDC42-201ENST00000315554 HHIPL2Q6UWX4 724 aa9.55□□□□□ -0.88
CDC42-201ENST00000315554 SULF1Q8IWU6 871 aa9.55□□□□□ -0.88
CDC42-201ENST00000315554 MAGEB6Q8N7X4 407 aa9.55□□□□□ -0.88
CDC42-201ENST00000315554 PI4K2BQ8TCG2 481 aa9.55□□□□□ -0.88
CDC42-201ENST00000315554 CCDC136Q96JN2 1154 aa9.55□□□□□ -0.88
CDC42-201ENST00000315554 ZDHHC15Q96MV8 337 aa9.55□□□□□ -0.88
CDC42-201ENST00000315554 USP40Q9NVE5 1235 aa9.55□□□□□ -0.88
CDC42-201ENST00000315554 MROH7-TTC4A0A0A0MT08 1334 aa9.55□□□□□ -0.88
CDC42-201ENST00000315554 MYO1BO43795 1136 aa9.54□□□□□ -0.88
CDC42-201ENST00000315554 CYP7A1P22680 504 aa9.54□□□□□ -0.88
CDC42-201ENST00000315554 MMP14P50281 582 aa9.54□□□□□ -0.88
CDC42-201ENST00000315554 DYNLL1P63167 89 aaKnown RBP9.54□□□□□ -0.88
CDC42-201ENST00000315554 CDC42EP5Q6NZY7 148 aa9.54□□□□□ -0.88
CDC42-201ENST00000315554 CDC37L1Q7L3B6 337 aa9.54□□□□□ -0.88
CDC42-201ENST00000315554 MIGA1Q8NAN2 632 aa9.54□□□□□ -0.88
CDC42-201ENST00000315554 GAKO14976 1311 aa9.54□□□□□ -0.88
CDC42-201ENST00000315554 TTC41PQ6P2S7 1318 aa9.54□□□□□ -0.88
CDC42-201ENST00000315554 PASKQ96RG2 1323 aa9.54□□□□□ -0.88
CDC42-201ENST00000315554 MYO5AQ9Y4I1 1855 aaKnown RBP9.54□□□□□ -0.88
CDC42-201ENST00000315554 ERC2O15083 957 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 GLRX3O76003 335 aaKnown RBP9.53□□□□□ -0.88
CDC42-201ENST00000315554 PDE6AP16499 860 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 GSTO1P78417 241 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 TCP10Q12799 353 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 MAP3K12Q12852 859 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 NFIAQ12857 509 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 PRKG1Q13976 671 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 TTF1Q15361 905 aaPredicted RBP9.53□□□□□ -0.88
CDC42-201ENST00000315554 SLC9C2Q5TAH2 1124 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 PLEKHM2Q8IWE5 1019 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 CDCA5Q96FF9 252 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 MRIQ9BWK5 157 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 AATFQ9NY61 560 aaKnown RBP eCLIP9.53□□□□□ -0.882e-6■■■□□ 17.9
CDC42-201ENST00000315554 FZD1Q9UP38 647 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 CELF2O95319 508 aaKnown RBP9.53□□□□□ -0.88
CDC42-201ENST00000315554 LDHCP07864 332 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 PICALMQ13492 652 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 RASA3Q14644 834 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 APOBEC3FQ8IUX4 373 aaKnown RBP9.53□□□□□ -0.88
CDC42-201ENST00000315554 SLF2Q8IX21 1173 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 SH3RF3Q8TEJ3 882 aaPredicted RBP9.53□□□□□ -0.88
CDC42-201ENST00000315554 TMEM39BQ9GZU3 492 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 DEFB129Q9H1M3 183 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 TMOD2Q9NZR1 351 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 STAP2Q9UGK3 403 aa9.53□□□□□ -0.88
CDC42-201ENST00000315554 PITPNM2Q9BZ72 1349 aa9.52□□□□□ -0.88
CDC42-201ENST00000315554 ZNF532Q9HCE3 1301 aa9.52□□□□□ -0.88
CDC42-201ENST00000315554 MYH2Q9UKX2 1941 aa9.52□□□□□ -0.89
CDC42-201ENST00000315554 POLR2AP24928 1970 aaKnown RBP9.52□□□□□ -0.89
CDC42-201ENST00000315554 MAST2Q6P0Q8 1798 aa9.52□□□□□ -0.89
CDC42-201ENST00000315554 GPR75-ASB3A0A0A6YYF3 556 aa9.52□□□□□ -0.89
CDC42-201ENST00000315554 APLP1P51693 650 aa9.52□□□□□ -0.89
CDC42-201ENST00000315554 RHBDL3P58872 404 aa9.52□□□□□ -0.89
CDC42-201ENST00000315554 CST9Q5W186 159 aa9.52□□□□□ -0.89
CDC42-201ENST00000315554 MOB2Q70IA6 237 aa9.52□□□□□ -0.89
CDC42-201ENST00000315554 CENPQQ7L2Z9 268 aaPredicted RBP9.52□□□□□ -0.89
CDC42-201ENST00000315554 IFNLR1Q8IU57 520 aaPredicted RBP9.52□□□□□ -0.89
CDC42-201ENST00000315554 ZFPM1Q8IX07 1006 aa9.52□□□□□ -0.89
CDC42-201ENST00000315554 TEX11Q8IYF3 940 aa9.52□□□□□ -0.89
CDC42-201ENST00000315554 BBXQ8WY36 941 aaPredicted RBP9.52□□□□□ -0.89
CDC42-201ENST00000315554 NOL10Q9BSC4 688 aaKnown RBP9.52□□□□□ -0.89
CDC42-201ENST00000315554 FSD1Q9BTV5 496 aa9.52□□□□□ -0.89
CDC42-201ENST00000315554 DDX4Q9NQI0 724 aaKnown RBP9.52□□□□□ -0.89
CDC42-201ENST00000315554 CNTNAP1P78357 1384 aa9.51□□□□□ -0.89
CDC42-201ENST00000315554 DOCK2Q92608 1830 aa9.51□□□□□ -0.89
CDC42-201ENST00000315554 TCRBV5S4A2TA0A5A2 114 aa9.51□□□□□ -0.89
CDC42-201ENST00000315554 TRIM6-TRIM34B2RNG4 842 aa9.51□□□□□ -0.89
CDC42-201ENST00000315554 WDHD1O75717 1129 aaPredicted RBP9.51□□□□□ -0.89
CDC42-201ENST00000315554 HSPA6P17066 643 aa9.51□□□□□ -0.89
CDC42-201ENST00000315554 RGS3P49796 1198 aa9.51□□□□□ -0.89
CDC42-201ENST00000315554 NBPF12Q5TAG4 269 aaPredicted RBP9.51□□□□□ -0.89
CDC42-201ENST00000315554 KBTBD3Q8NAB2 608 aa9.51□□□□□ -0.89
CDC42-201ENST00000315554 RILPL2Q969X0 211 aa9.51□□□□□ -0.89
CDC42-201ENST00000315554 PPP4R2Q9NY27 417 aa9.51□□□□□ -0.89
CDC42-201ENST00000315554 FAM198AQ9UFP1 575 aa9.51□□□□□ -0.89
CDC42-201ENST00000315554 MAGEB6P1A0A0J9YX57 407 aa9.5□□□□□ -0.89
CDC42-201ENST00000315554 TMEM88BA6NKF7 163 aa9.5□□□□□ -0.89
CDC42-201ENST00000315554 BAG3O95817 575 aa9.5□□□□□ -0.89
CDC42-201ENST00000315554 SLURP2P0DP57 97 aa9.5□□□□□ -0.89
CDC42-201ENST00000315554 ADD2P35612 726 aa9.5□□□□□ -0.89
CDC42-201ENST00000315554 TNFAIP1Q13829 316 aa9.5□□□□□ -0.89
CDC42-201ENST00000315554 TTLL12Q14166 644 aaPredicted RBP9.5□□□□□ -0.89
CDC42-201ENST00000315554 SLC4A8Q2Y0W8 1093 aa9.5□□□□□ -0.89
CDC42-201ENST00000315554 MAPKAPK5Q8IW41 473 aa9.5□□□□□ -0.89
CDC42-201ENST00000315554 LCORLQ8N3X6 602 aa9.5□□□□□ -0.89
CDC42-201ENST00000315554 TGFBRAP1Q8WUH2 860 aa9.5□□□□□ -0.89
CDC42-201ENST00000315554 TEPSINQ96N21 525 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms