RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 NEK1Q96PY6 1258 aa9.25□□□□□ -0.93
CNOT4-201ENST00000315544 PAG1Q9NWQ8 432 aa9.25□□□□□ -0.93
CNOT4-201ENST00000315544 PPP6R2O75170 966 aa9.24□□□□□ -0.93
CNOT4-201ENST00000315544 YBX3P16989 372 aaKnown RBP eCLIP9.24□□□□□ -0.93
CNOT4-201ENST00000315544 NDUFA8P51970 172 aa9.24□□□□□ -0.93
CNOT4-201ENST00000315544 BRF1Q92994 677 aa9.24□□□□□ -0.93
CNOT4-201ENST00000315544 TTYH3Q9C0H2 523 aa9.24□□□□□ -0.93
CNOT4-201ENST00000315544 RIOK3O14730 519 aaKnown RBP9.24□□□□□ -0.93
CNOT4-201ENST00000315544 IKBKBO14920 756 aa9.24□□□□□ -0.93
CNOT4-201ENST00000315544 GRIN1Q05586 938 aa9.24□□□□□ -0.93
CNOT4-201ENST00000315544 RILPL2Q969X0 211 aa9.24□□□□□ -0.93
CNOT4-201ENST00000315544 STRBPQ96SI9 672 aaKnown RBP9.24□□□□□ -0.93
CNOT4-201ENST00000315544 GJB4Q9NTQ9 266 aa9.24□□□□□ -0.93
CNOT4-201ENST00000315544 ZBTB1Q9Y2K1 713 aa9.24□□□□□ -0.93
CNOT4-201ENST00000315544 U3KPZ7 1027 aaPredicted RBP9.24□□□□□ -0.93
CNOT4-201ENST00000315544 TULP2O00295 520 aa9.24□□□□□ -0.93
CNOT4-201ENST00000315544 EVX2Q03828 476 aa9.24□□□□□ -0.93
CNOT4-201ENST00000315544 R3HDM1Q15032 1099 aaKnown RBP9.24□□□□□ -0.93
CNOT4-201ENST00000315544 GIGYF2Q6Y7W6 1299 aaKnown RBP9.24□□□□□ -0.93
CNOT4-201ENST00000315544 CLASRPQ8N2M8 674 aaKnown RBP9.24□□□□□ -0.93
CNOT4-201ENST00000315544 DPF2Q92785 391 aa9.24□□□□□ -0.93
CNOT4-201ENST00000315544 ACSBG1Q96GR2 724 aa9.24□□□□□ -0.93
CNOT4-201ENST00000315544 MYD88Q99836 296 aa9.24□□□□□ -0.93
CNOT4-201ENST00000315544 GSG1L2A8MUP6 293 aa9.23□□□□□ -0.93
CNOT4-201ENST00000315544 YEATS4O95619 227 aa9.23□□□□□ -0.93
CNOT4-201ENST00000315544 NAA30Q147X3 362 aaPredicted RBP9.23□□□□□ -0.93
CNOT4-201ENST00000315544 RNF113AO15541 343 aaKnown RBP9.23□□□□□ -0.93
CNOT4-201ENST00000315544 KMT5BQ4FZB7 885 aa9.23□□□□□ -0.93
CNOT4-201ENST00000315544 TCEANC2Q96MN5 208 aa9.23□□□□□ -0.93
CNOT4-201ENST00000315544 BOLA2Q9H3K6 86 aa9.23□□□□□ -0.93
CNOT4-201ENST00000315544 VWA3AA6NCI4 1184 aa9.23□□□□□ -0.93
CNOT4-201ENST00000315544 WTIPA6NIX2 430 aaPredicted RBP9.23□□□□□ -0.93
CNOT4-201ENST00000315544 IL15P40933 162 aaPredicted RBP9.23□□□□□ -0.93
CNOT4-201ENST00000315544 UBE3CQ15386 1083 aa9.23□□□□□ -0.93
CNOT4-201ENST00000315544 DPCR1Q3MIW9 517 aa9.23□□□□□ -0.93
CNOT4-201ENST00000315544 PI16Q6UXB8 463 aa9.23□□□□□ -0.93
CNOT4-201ENST00000315544 DNAJC10Q8IXB1 793 aa9.23□□□□□ -0.93
CNOT4-201ENST00000315544 SPON1Q9HCB6 807 aa9.23□□□□□ -0.93
CNOT4-201ENST00000315544 DDX19AQ9NUU7 478 aaKnown RBP9.23□□□□□ -0.93
CNOT4-201ENST00000315544 ANK1P16157 1881 aa9.23□□□□□ -0.93
CNOT4-201ENST00000315544 A0A1B0GUL7 405 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 A1BGP04217 495 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 LIFRP42702 1097 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 SLC39A14Q15043 492 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 ANKRD1Q15327 319 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 ANO6Q4KMQ2 910 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 ZNF662Q6ZS27 426 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 SYT17Q9BSW7 474 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 NENFQ9UMX5 172 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 PARP3Q9Y6F1 533 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 PTPDC1A2A3K4 754 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 PTGS1P23219 599 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 EHHADHQ08426 723 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 MORC3Q14149 939 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 IRF2BP1Q8IU81 584 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 STAG1Q8WVM7 1258 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 ANKS1AQ92625 1134 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 A0A087WWV3 80 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 RNF225M0QZC1 329 aaPredicted RBP9.22□□□□□ -0.93
CNOT4-201ENST00000315544 CAVIN2O95810 425 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 GUCY1A2P33402 732 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 PIP4K2AP48426 406 aaPredicted RBP9.22□□□□□ -0.93
CNOT4-201ENST00000315544 CABP4P57796 275 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 FAM160A1Q05DH4 1040 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 C3orf67Q6ZVT6 689 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 ZNF572Q7Z3I7 529 aaPredicted RBP9.22□□□□□ -0.93
CNOT4-201ENST00000315544 CCAR2Q8N163 923 aaKnown RBP9.22□□□□□ -0.93
CNOT4-201ENST00000315544 SCAND2PQ9GZW5 306 aaPredicted RBP9.22□□□□□ -0.93
CNOT4-201ENST00000315544 PLIN4Q96Q06 1357 aa9.22□□□□□ -0.93
CNOT4-201ENST00000315544 FNDC1Q4ZHG4 1894 aaPredicted RBP9.22□□□□□ -0.93
CNOT4-201ENST00000315544 FLT1P17948 1338 aa9.21□□□□□ -0.93
CNOT4-201ENST00000315544 UQCRHLA0A096LP55 91 aa9.21□□□□□ -0.93
CNOT4-201ENST00000315544 UQCRHP07919 91 aa9.21□□□□□ -0.93
CNOT4-201ENST00000315544 CSB-PGBD3P0DP91 1061 aa9.21□□□□□ -0.93
CNOT4-201ENST00000315544 CMA1P23946 247 aa9.21□□□□□ -0.93
CNOT4-201ENST00000315544 AMPD2Q01433 879 aa9.21□□□□□ -0.93
CNOT4-201ENST00000315544 CASC1Q6TDU7 716 aa9.21□□□□□ -0.93
CNOT4-201ENST00000315544 LMBR1LQ6UX01 489 aa9.21□□□□□ -0.93
CNOT4-201ENST00000315544 ZNF594Q96JF6 807 aaPredicted RBP9.21□□□□□ -0.93
CNOT4-201ENST00000315544 NKRFO15226 690 aaKnown RBP eCLIP9.21□□□□□ -0.94
CNOT4-201ENST00000315544 TIMM10P62072 90 aa9.21□□□□□ -0.94
CNOT4-201ENST00000315544 RCSD1Q6JBY9 416 aa9.21□□□□□ -0.94
CNOT4-201ENST00000315544 ZNF579Q8NAF0 562 aaKnown RBP9.21□□□□□ -0.94
CNOT4-201ENST00000315544 PURBQ96QR8 312 aaKnown RBP9.21□□□□□ -0.94
CNOT4-201ENST00000315544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.21□□□□□ -0.94
CNOT4-201ENST00000315544 SF3B3Q15393 1217 aaKnown RBP9.21□□□□□ -0.94
CNOT4-201ENST00000315544 GRIPAP1Q4V328 841 aa9.21□□□□□ -0.94
CNOT4-201ENST00000315544 COBLL1Q53SF7 1204 aa9.21□□□□□ -0.94
CNOT4-201ENST00000315544 TC2NQ8N9U0 490 aa9.21□□□□□ -0.94
CNOT4-201ENST00000315544 PGAP2Q9UHJ9 254 aa9.21□□□□□ -0.94
CNOT4-201ENST00000315544 NFIXQ14938 502 aa9.2□□□□□ -0.94
CNOT4-201ENST00000315544 C1orf141Q5JVX7 400 aa9.2□□□□□ -0.94
CNOT4-201ENST00000315544 NLGN1Q8N2Q7 840 aa9.2□□□□□ -0.94
CNOT4-201ENST00000315544 KIF18AQ8NI77 898 aa9.2□□□□□ -0.94
CNOT4-201ENST00000315544 DDX11Q96FC9 970 aa9.2□□□□□ -0.94
CNOT4-201ENST00000315544 PODXL2Q9NZ53 605 aa9.2□□□□□ -0.94
CNOT4-201ENST00000315544 KIAA1468Q9P260 1216 aa9.2□□□□□ -0.94
CNOT4-201ENST00000315544 MAP2K7O14733 419 aa9.2□□□□□ -0.94
CNOT4-201ENST00000315544 APOBRQ0VD83 1088 aa9.2□□□□□ -0.94
CNOT4-201ENST00000315544 KRT32Q14532 448 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms