RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 CTDNEP1O95476 244 aa27.69■■■□□ 2.02
SNCB-201ENST00000310112 CCT2P78371 535 aaKnown RBP27.69■■■□□ 2.02
SNCB-201ENST00000310112 GRIPAP1Q4V328 841 aa27.69■■■□□ 2.02
SNCB-201ENST00000310112 CTR9Q6PD62 1173 aa27.69■■■□□ 2.02
SNCB-201ENST00000310112 SLC51AQ86UW1 340 aa27.69■■■□□ 2.02
SNCB-201ENST00000310112 LY9Q9HBG7 655 aa27.69■■■□□ 2.02
SNCB-201ENST00000310112 HPS5Q9UPZ3 1129 aa27.69■■■□□ 2.02
SNCB-201ENST00000310112 LAMB1P07942 1786 aa27.68■■■□□ 2.02
SNCB-201ENST00000310112 NCLP19338 710 aaKnown RBP27.68■■■□□ 2.02
SNCB-201ENST00000310112 SYNE3Q6ZMZ3 975 aa27.68■■■□□ 2.02
SNCB-201ENST00000310112 ZSCAN16Q9H4T2 348 aaPredicted RBP27.68■■■□□ 2.02
SNCB-201ENST00000310112 ISY1Q9ULR0 285 aaKnown RBP27.68■■■□□ 2.02
SNCB-201ENST00000310112 NID2Q14112 1375 aa27.68■■■□□ 2.02
SNCB-201ENST00000310112 ORC4O43929 436 aa27.67■■■□□ 2.02
SNCB-201ENST00000310112 APOA5Q6Q788 366 aa27.67■■■□□ 2.02
SNCB-201ENST00000310112 GPHNQ9NQX3 736 aaPredicted RBP27.67■■■□□ 2.02
SNCB-201ENST00000310112 H3BQV1 296 aa27.66■■■□□ 2.02
SNCB-201ENST00000310112 CPLX1O14810 134 aa27.66■■■□□ 2.02
SNCB-201ENST00000310112 MFSD14BQ5SR56 506 aa27.66■■■□□ 2.02
SNCB-201ENST00000310112 IFFO2Q5TF58 517 aa27.66■■■□□ 2.02
SNCB-201ENST00000310112 NFXL1Q6ZNB6 911 aa27.66■■■□□ 2.02
SNCB-201ENST00000310112 AMOTL1Q8IY63 956 aa27.66■■■□□ 2.02
SNCB-201ENST00000310112 TOMM22Q9NS69 142 aa27.66■■■□□ 2.02
SNCB-201ENST00000310112 GPR75-ASB3A0A0A6YYF3 556 aa27.65■■■□□ 2.02
SNCB-201ENST00000310112 CCDC69A6NI79 296 aa27.65■■■□□ 2.02
SNCB-201ENST00000310112 USP17L12C9JPN9 530 aa27.65■■■□□ 2.02
SNCB-201ENST00000310112 USP17L21D6R901 530 aa27.65■■■□□ 2.02
SNCB-201ENST00000310112 ZBTB43O43298 467 aa27.65■■■□□ 2.02
SNCB-201ENST00000310112 METAP2P50579 478 aaKnown RBP eCLIP27.65■■■□□ 2.02
SNCB-201ENST00000310112 PPP2R5BQ15173 497 aa27.65■■■□□ 2.02
SNCB-201ENST00000310112 JAG2Q9Y219 1238 aa27.65■■■□□ 2.02
SNCB-201ENST00000310112 TACC3Q9Y6A5 838 aa27.65■■■□□ 2.02
SNCB-201ENST00000310112 MYH2Q9UKX2 1941 aa27.65■■■□□ 2.02
SNCB-201ENST00000310112 GAKO14976 1311 aa27.64■■■□□ 2.02
SNCB-201ENST00000310112 WTAPQ15007 396 aa27.64■■■□□ 2.02
SNCB-201ENST00000310112 RRP12Q5JTH9 1297 aaKnown RBP27.64■■■□□ 2.02
SNCB-201ENST00000310112 CDC37L1Q7L3B6 337 aa27.64■■■□□ 2.02
SNCB-201ENST00000310112 UBAC1Q9BSL1 405 aa27.64■■■□□ 2.02
SNCB-201ENST00000310112 RTFDC1Q9BY42 306 aaPredicted RBP27.64■■■□□ 2.02
SNCB-201ENST00000310112 NCOA5Q9HCD5 579 aaKnown RBP27.64■■■□□ 2.02
SNCB-201ENST00000310112 SLC12A7Q9Y666 1083 aa27.64■■■□□ 2.02
SNCB-201ENST00000310112 BAZ2AQ9UIF9 1905 aaKnown RBP27.64■■■□□ 2.01
SNCB-201ENST00000310112 USP5P45974 858 aa27.63■■■□□ 2.01
SNCB-201ENST00000310112 PDE4BQ07343 736 aa27.63■■■□□ 2.01
SNCB-201ENST00000310112 PODNQ7Z5L7 613 aa27.63■■■□□ 2.01
SNCB-201ENST00000310112 DDX11Q96FC9 970 aa27.63■■■□□ 2.01
SNCB-201ENST00000310112 MKRN1Q9UHC7 482 aaKnown RBP27.63■■■□□ 2.01
SNCB-201ENST00000310112 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.63■■■□□ 2.01
SNCB-201ENST00000310112 G3V3G9 751 aa27.62■■■□□ 2.01
SNCB-201ENST00000310112 FKBP1AP62942 108 aaKnown RBP27.62■■■□□ 2.01
SNCB-201ENST00000310112 DCAF8Q5TAQ9 597 aa27.62■■■□□ 2.01
SNCB-201ENST00000310112 SUPT20HQ8NEM7 779 aa27.62■■■□□ 2.01
SNCB-201ENST00000310112 C10orf71Q711Q0 1435 aa27.62■■■□□ 2.01
SNCB-201ENST00000310112 GTF2IP78347 998 aa27.61■■■□□ 2.01
SNCB-201ENST00000310112 KRT85P78386 507 aa27.61■■■□□ 2.01
SNCB-201ENST00000310112 IQCA1Q86XH1 822 aa27.61■■■□□ 2.01
SNCB-201ENST00000310112 ROBO3Q96MS0 1386 aa27.61■■■□□ 2.01
SNCB-201ENST00000310112 CCDC196A0A1B0GTZ2 297 aa27.6■■■□□ 2.01
SNCB-201ENST00000310112 RIMBP2O15034 1052 aa27.6■■■□□ 2.01
SNCB-201ENST00000310112 ATL3Q6DD88 541 aa27.6■■■□□ 2.01
SNCB-201ENST00000310112 INCENPQ9NQS7 918 aa27.6■■■□□ 2.01
SNCB-201ENST00000310112 GOLGA8AA7E2F4 631 aa27.6■■■□□ 2.01
SNCB-201ENST00000310112 BTDP43251 543 aa27.6■■■□□ 2.01
SNCB-201ENST00000310112 DIXDC1Q155Q3 683 aa27.6■■■□□ 2.01
SNCB-201ENST00000310112 GRIK5Q16478 980 aa27.6■■■□□ 2.01
SNCB-201ENST00000310112 C12orf60Q5U649 245 aa27.6■■■□□ 2.01
SNCB-201ENST00000310112 DEFB132Q7Z7B7 95 aa27.6■■■□□ 2.01
SNCB-201ENST00000310112 USP48Q86UV5 1035 aa27.6■■■□□ 2.01
SNCB-201ENST00000310112 SH3RF3Q8TEJ3 882 aaPredicted RBP27.6■■■□□ 2.01
SNCB-201ENST00000310112 RESTQ13127 1097 aa27.59■■■□□ 2.01
SNCB-201ENST00000310112 SEC23AQ15436 765 aa27.59■■■□□ 2.01
SNCB-201ENST00000310112 CCDC178Q5BJE1 867 aa27.59■■■□□ 2.01
SNCB-201ENST00000310112 NKX2-3Q8TAU0 364 aa27.59■■■□□ 2.01
SNCB-201ENST00000310112 SCAND2PQ9GZW5 306 aaPredicted RBP27.59■■■□□ 2.01
SNCB-201ENST00000310112 ZNF287Q9HBT7 754 aa27.59■■■□□ 2.01
SNCB-201ENST00000310112 MCM9Q9NXL9 1143 aa27.59■■■□□ 2.01
SNCB-201ENST00000310112 ORC3Q9UBD5 711 aaPredicted RBP27.59■■■□□ 2.01
SNCB-201ENST00000310112 ELP1O95163 1332 aa27.58■■■□□ 2.01
SNCB-201ENST00000310112 STK36Q9NRP7 1315 aa27.58■■■□□ 2.01
SNCB-201ENST00000310112 SLX4Q8IY92 1834 aa27.58■■■□□ 2.01
SNCB-201ENST00000310112 C7orf43Q8WVR3 580 aa27.58■■■□□ 2.01
SNCB-201ENST00000310112 SYAP1Q96A49 352 aaPredicted RBP27.58■■■□□ 2.01
SNCB-201ENST00000310112 ZSCAN10Q96SZ4 725 aaPredicted RBP27.58■■■□□ 2.01
SNCB-201ENST00000310112 CNPY2Q9Y2B0 182 aa27.58■■■□□ 2.01
SNCB-201ENST00000310112 DLEC1Q9Y238 1755 aa27.58■■■□□ 2
SNCB-201ENST00000310112 NAV1Q8NEY1 1877 aa27.57■■■□□ 2
SNCB-201ENST00000310112 TCHHQ07283 1943 aa27.57■■■□□ 2
SNCB-201ENST00000310112 CALM1P0DP23 149 aa27.57■■■□□ 2
SNCB-201ENST00000310112 CALM2P0DP24 149 aa27.57■■■□□ 2
SNCB-201ENST00000310112 CALM3P0DP25 149 aa27.57■■■□□ 2
SNCB-201ENST00000310112 FDPSP14324 419 aaKnown RBP27.57■■■□□ 2
SNCB-201ENST00000310112 UBE2HP62256 183 aa27.57■■■□□ 2
SNCB-201ENST00000310112 DNM1Q05193 864 aaKnown RBP27.57■■■□□ 2
SNCB-201ENST00000310112 L1TD1Q5T7N2 865 aaKnown RBP27.57■■■□□ 2
SNCB-201ENST00000310112 MRIQ9BWK5 157 aa27.57■■■□□ 2
SNCB-201ENST00000310112 GZF1Q9H116 711 aaPredicted RBP27.57■■■□□ 2
SNCB-201ENST00000310112 TNKSO95271 1327 aa27.56■■■□□ 2
SNCB-201ENST00000310112 KLHL34Q8N239 644 aa27.56■■■□□ 2
SNCB-201ENST00000310112 GPT2Q8TD30 523 aa27.56■■■□□ 2
SNCB-201ENST00000310112 WASF1Q92558 559 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms