RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 DCP1AQ9NPI6 582 aaPredicted RBP24.88■■□□□ 1.57
ATG4D-201ENST00000309469 ORC3Q9UBD5 711 aaPredicted RBP24.88■■□□□ 1.57
ATG4D-201ENST00000309469 CYP2D7A0A087X1C5 515 aa24.88■■□□□ 1.57
ATG4D-201ENST00000309469 CCDC69A6NI79 296 aa24.88■■□□□ 1.57
ATG4D-201ENST00000309469 USP17L12C9JPN9 530 aa24.88■■□□□ 1.57
ATG4D-201ENST00000309469 USP17L21D6R901 530 aa24.88■■□□□ 1.57
ATG4D-201ENST00000309469 SMIM22K7EJ46 135 aa24.88■■□□□ 1.57
ATG4D-201ENST00000309469 ALDH1B1P30837 517 aa24.88■■□□□ 1.57
ATG4D-201ENST00000309469 GRIK5Q16478 980 aa24.88■■□□□ 1.57
ATG4D-201ENST00000309469 MSL1Q68DK7 614 aa24.88■■□□□ 1.57
ATG4D-201ENST00000309469 ESR2Q92731 530 aa24.88■■□□□ 1.57
ATG4D-201ENST00000309469 SYAP1Q96A49 352 aaPredicted RBP24.88■■□□□ 1.57
ATG4D-201ENST00000309469 SLC12A7Q9Y666 1083 aa24.88■■□□□ 1.57
ATG4D-201ENST00000309469 RGPD3A6NKT7 1758 aaPredicted RBP24.87■■□□□ 1.57
ATG4D-201ENST00000309469 RGPD4Q7Z3J3 1758 aa24.87■■□□□ 1.57
ATG4D-201ENST00000309469 ADD1P35611 737 aaKnown RBP24.87■■□□□ 1.57
ATG4D-201ENST00000309469 ZKSCAN3Q9BRR0 538 aa24.87■■□□□ 1.57
ATG4D-201ENST00000309469 SCAND2PQ9GZW5 306 aaPredicted RBP24.87■■□□□ 1.57
ATG4D-201ENST00000309469 ERICH2A1L162 156 aa24.86■■□□□ 1.57
ATG4D-201ENST00000309469 FGRP09769 529 aa24.86■■□□□ 1.57
ATG4D-201ENST00000309469 PCP11498 1178 aaKnown RBP24.86■■□□□ 1.57
ATG4D-201ENST00000309469 TTC6Q86TZ1 520 aa24.86■■□□□ 1.57
ATG4D-201ENST00000309469 MICU3Q86XE3 530 aa24.86■■□□□ 1.57
ATG4D-201ENST00000309469 TMTC2Q8N394 836 aa24.86■■□□□ 1.57
ATG4D-201ENST00000309469 TFIP11Q9UBB9 837 aaKnown RBP24.86■■□□□ 1.57
ATG4D-201ENST00000309469 CHD4Q14839 1912 aa24.86■■□□□ 1.57
ATG4D-201ENST00000309469 LRRC37AA6NMS7 1700 aa24.86■■□□□ 1.57
ATG4D-201ENST00000309469 CDKL5O76039 1030 aa24.86■■□□□ 1.57
ATG4D-201ENST00000309469 RXRAP19793 462 aa24.86■■□□□ 1.57
ATG4D-201ENST00000309469 WTAPQ15007 396 aa24.86■■□□□ 1.57
ATG4D-201ENST00000309469 SYNE3Q6ZMZ3 975 aa24.86■■□□□ 1.57
ATG4D-201ENST00000309469 ELP1O95163 1332 aa24.86■■□□□ 1.57
ATG4D-201ENST00000309469 GOLGA8AA7E2F4 631 aa24.85■■□□□ 1.57
ATG4D-201ENST00000309469 LDHCP07864 332 aa24.85■■□□□ 1.57
ATG4D-201ENST00000309469 CDC27P30260 824 aa24.85■■□□□ 1.57
ATG4D-201ENST00000309469 EZH2Q15910 746 aaKnown RBP24.85■■□□□ 1.57
ATG4D-201ENST00000309469 CPLX2Q6PUV4 134 aaKnown RBP24.85■■□□□ 1.57
ATG4D-201ENST00000309469 MASTLQ96GX5 879 aa24.85■■□□□ 1.57
ATG4D-201ENST00000309469 CAMKK2Q96RR4 588 aa24.85■■□□□ 1.57
ATG4D-201ENST00000309469 GUCY1B3Q02153 619 aa24.84■■□□□ 1.57
ATG4D-201ENST00000309469 SBK1Q52WX2 424 aa24.84■■□□□ 1.57
ATG4D-201ENST00000309469 UBAC1Q9BSL1 405 aa24.84■■□□□ 1.57
ATG4D-201ENST00000309469 CCDC88AQ3V6T2 1871 aa24.84■■□□□ 1.57
ATG4D-201ENST00000309469 BAG3O95817 575 aa24.84■■□□□ 1.57
ATG4D-201ENST00000309469 PPP4CP60510 307 aa24.84■■□□□ 1.57
ATG4D-201ENST00000309469 EN1Q05925 392 aaPredicted RBP24.84■■□□□ 1.57
ATG4D-201ENST00000309469 DIXDC1Q155Q3 683 aa24.84■■□□□ 1.57
ATG4D-201ENST00000309469 SLC15A2Q16348 729 aa24.84■■□□□ 1.57
ATG4D-201ENST00000309469 C8orf76Q96K31 380 aa24.84■■□□□ 1.57
ATG4D-201ENST00000309469 MYL10Q9BUA6 226 aa24.84■■□□□ 1.57
ATG4D-201ENST00000309469 FAM217BQ9NTX9 383 aaPredicted RBP24.84■■□□□ 1.57
ATG4D-201ENST00000309469 ARPP21Q9UBL0 812 aaPredicted RBP24.84■■□□□ 1.57
ATG4D-201ENST00000309469 LTBP1Q14766 1721 aa24.84■■□□□ 1.57
ATG4D-201ENST00000309469 CCDC144CPQ8IYA2 1237 aa24.83■■□□□ 1.57
ATG4D-201ENST00000309469 SPATA32Q96LK8 384 aa24.83■■□□□ 1.57
ATG4D-201ENST00000309469 ANO8Q9HCE9 1232 aaPredicted RBP24.83■■□□□ 1.57
ATG4D-201ENST00000309469 SYCE3A1L190 88 aa24.82■■□□□ 1.56
ATG4D-201ENST00000309469 TPRNQ4KMQ1 711 aa24.82■■□□□ 1.56
ATG4D-201ENST00000309469 MPNDQ8N594 471 aa24.82■■□□□ 1.56
ATG4D-201ENST00000309469 LEO1Q8WVC0 666 aaPredicted RBP24.82■■□□□ 1.56
ATG4D-201ENST00000309469 NOL10Q9BSC4 688 aaKnown RBP24.82■■□□□ 1.56
ATG4D-201ENST00000309469 KIAA1551Q9HCM1 1747 aa24.82■■□□□ 1.56
ATG4D-201ENST00000309469 NID2Q14112 1375 aa24.82■■□□□ 1.56
ATG4D-201ENST00000309469 MROH7-TTC4A0A0A0MT08 1334 aa24.82■■□□□ 1.56
ATG4D-201ENST00000309469 NTRK3Q16288 839 aa24.82■■□□□ 1.56
ATG4D-201ENST00000309469 RGS22Q8NE09 1264 aa24.82■■□□□ 1.56
ATG4D-201ENST00000309469 FBXO18Q8NFZ0 1043 aa24.82■■□□□ 1.56
ATG4D-201ENST00000309469 SH3RF3Q8TEJ3 882 aaPredicted RBP24.82■■□□□ 1.56
ATG4D-201ENST00000309469 TBC1D22AQ8WUA7 517 aa24.82■■□□□ 1.56
ATG4D-201ENST00000309469 CFAP45Q9UL16 551 aa24.82■■□□□ 1.56
ATG4D-201ENST00000309469 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.82■■□□□ 1.56
ATG4D-201ENST00000309469 DUOX1Q9NRD9 1551 aa24.81■■□□□ 1.56
ATG4D-201ENST00000309469 FAM205AQ6ZU69 1335 aa24.81■■□□□ 1.56
ATG4D-201ENST00000309469 RIMBP2O15034 1052 aa24.81■■□□□ 1.56
ATG4D-201ENST00000309469 SLC3A2P08195 630 aaKnown RBP24.81■■□□□ 1.56
ATG4D-201ENST00000309469 SEC23AQ15436 765 aa24.81■■□□□ 1.56
ATG4D-201ENST00000309469 LRSAM1Q6UWE0 723 aa24.81■■□□□ 1.56
ATG4D-201ENST00000309469 COA1Q9GZY4 146 aa24.81■■□□□ 1.56
ATG4D-201ENST00000309469 STK32BQ9NY57 414 aa24.81■■□□□ 1.56
ATG4D-201ENST00000309469 MKRN1Q9UHC7 482 aaKnown RBP24.81■■□□□ 1.56
ATG4D-201ENST00000309469 TNKSO95271 1327 aa24.81■■□□□ 1.56
ATG4D-201ENST00000309469 ORC4O43929 436 aa24.8■■□□□ 1.56
ATG4D-201ENST00000309469 RANBP6O60518 1105 aaKnown RBP24.8■■□□□ 1.56
ATG4D-201ENST00000309469 MFSD14BQ5SR56 506 aa24.8■■□□□ 1.56
ATG4D-201ENST00000309469 OLFM4Q6UX06 510 aa24.8■■□□□ 1.56
ATG4D-201ENST00000309469 ZSCAN10Q96SZ4 725 aaPredicted RBP24.8■■□□□ 1.56
ATG4D-201ENST00000309469 MCM9Q9NXL9 1143 aa24.8■■□□□ 1.56
ATG4D-201ENST00000309469 PRDM1O75626 825 aa24.8■■□□□ 1.56
ATG4D-201ENST00000309469 CYP2D6P10635 497 aa24.8■■□□□ 1.56
ATG4D-201ENST00000309469 USP5P45974 858 aa24.8■■□□□ 1.56
ATG4D-201ENST00000309469 RCAN1P53805 252 aa24.8■■□□□ 1.56
ATG4D-201ENST00000309469 EVX2Q03828 476 aa24.8■■□□□ 1.56
ATG4D-201ENST00000309469 OTUD7BQ6GQQ9 843 aa24.8■■□□□ 1.56
ATG4D-201ENST00000309469 RTFDC1Q9BY42 306 aaPredicted RBP24.8■■□□□ 1.56
ATG4D-201ENST00000309469 ZC3H12CQ9C0D7 883 aaKnown RBP24.8■■□□□ 1.56
ATG4D-201ENST00000309469 TMX4Q9H1E5 349 aaPredicted RBP24.8■■□□□ 1.56
ATG4D-201ENST00000309469 IARSP41252 1262 aaKnown RBP24.79■■□□□ 1.56
ATG4D-201ENST00000309469 CCDC183Q5T5S1 534 aa24.79■■□□□ 1.56
ATG4D-201ENST00000309469 ATL3Q6DD88 541 aa24.79■■□□□ 1.56
ATG4D-201ENST00000309469 DPP8Q6V1X1 898 aaPredicted RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms