RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 REM2Q8IYK8 340 aaPredicted RBP23.96■■□□□ 1.43
VEGFB-201ENST00000309422 SH3RF3Q8TEJ3 882 aaPredicted RBP23.96■■□□□ 1.43
VEGFB-201ENST00000309422 AKAP11Q9UKA4 1901 aa23.96■■□□□ 1.43
VEGFB-201ENST00000309422 TSHZ3Q63HK5 1081 aa23.95■■□□□ 1.42
VEGFB-201ENST00000309422 RASAL3Q86YV0 1011 aa23.95■■□□□ 1.42
VEGFB-201ENST00000309422 WRNIP1Q96S55 665 aa23.95■■□□□ 1.42
VEGFB-201ENST00000309422 ZNF532Q9HCE3 1301 aa23.95■■□□□ 1.42
VEGFB-201ENST00000309422 RFX7Q2KHR2 1363 aa23.95■■□□□ 1.42
VEGFB-201ENST00000309422 HLA-DOAP06340 250 aa23.94■■□□□ 1.42
VEGFB-201ENST00000309422 CHD1LQ86WJ1 897 aa23.94■■□□□ 1.42
VEGFB-201ENST00000309422 DDRGK1Q96HY6 314 aa23.94■■□□□ 1.42
VEGFB-201ENST00000309422 CRNKL1Q9BZJ0 848 aaKnown RBP23.94■■□□□ 1.42
VEGFB-201ENST00000309422 OSBPL5Q9H0X9 879 aaPredicted RBP23.94■■□□□ 1.42
VEGFB-201ENST00000309422 DHX36Q9H2U1 1008 aaKnown RBP23.94■■□□□ 1.42
VEGFB-201ENST00000309422 MAP3K9P80192 1104 aa23.93■■□□□ 1.42
VEGFB-201ENST00000309422 CDAN1Q8IWY9 1227 aa23.93■■□□□ 1.42
VEGFB-201ENST00000309422 TGFBRAP1Q8WUH2 860 aa23.93■■□□□ 1.42
VEGFB-201ENST00000309422 EDC3Q96F86 508 aaKnown RBP23.93■■□□□ 1.42
VEGFB-201ENST00000309422 AOC2O75106 756 aa23.92■■□□□ 1.42
VEGFB-201ENST00000309422 IGHDP01880 384 aa23.92■■□□□ 1.42
VEGFB-201ENST00000309422 ZFYP08048 801 aaPredicted RBP23.92■■□□□ 1.42
VEGFB-201ENST00000309422 LDLRAD1Q5T700 205 aa23.92■■□□□ 1.42
VEGFB-201ENST00000309422 MIGA2Q7L4E1 593 aa23.92■■□□□ 1.42
VEGFB-201ENST00000309422 ADGRA1Q86SQ6 560 aa23.92■■□□□ 1.42
VEGFB-201ENST00000309422 KBTBD3Q8NAB2 608 aa23.92■■□□□ 1.42
VEGFB-201ENST00000309422 FSD1Q9BTV5 496 aa23.92■■□□□ 1.42
VEGFB-201ENST00000309422 FZD1Q9UP38 647 aa23.92■■□□□ 1.42
VEGFB-201ENST00000309422 COL2A1P02458 1487 aaPredicted RBP23.92■■□□□ 1.42
VEGFB-201ENST00000309422 USP2O75604 605 aaPredicted RBP23.91■■□□□ 1.42
VEGFB-201ENST00000309422 ADD2P35612 726 aa23.91■■□□□ 1.42
VEGFB-201ENST00000309422 NUCB1Q02818 461 aa23.91■■□□□ 1.42
VEGFB-201ENST00000309422 SREBF2Q12772 1141 aa23.91■■□□□ 1.42
VEGFB-201ENST00000309422 UBE3CQ15386 1083 aa23.91■■□□□ 1.42
VEGFB-201ENST00000309422 MAPKAPK5Q8IW41 473 aa23.91■■□□□ 1.42
VEGFB-201ENST00000309422 AMOTL1Q8IY63 956 aa23.91■■□□□ 1.42
VEGFB-201ENST00000309422 FLT1P17948 1338 aa23.91■■□□□ 1.42
VEGFB-201ENST00000309422 HSPA1AP0DMV8 641 aaKnown RBP23.91■■□□□ 1.42
VEGFB-201ENST00000309422 HSPA1BP0DMV9 641 aaKnown RBP23.91■■□□□ 1.42
VEGFB-201ENST00000309422 CRACR2BQ8N4Y2 399 aaPredicted RBP23.91■■□□□ 1.42
VEGFB-201ENST00000309422 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.91■■□□□ 1.42
VEGFB-201ENST00000309422 DDX4Q9NQI0 724 aaKnown RBP23.91■■□□□ 1.42
VEGFB-201ENST00000309422 DOCK2Q92608 1830 aa23.9■■□□□ 1.42
VEGFB-201ENST00000309422 ATRNL1Q5VV63 1379 aa23.9■■□□□ 1.42
VEGFB-201ENST00000309422 CA12O43570 354 aa23.9■■□□□ 1.42
VEGFB-201ENST00000309422 ZBTB48P10074 688 aaPredicted RBP23.9■■□□□ 1.42
VEGFB-201ENST00000309422 DYNLL1P63167 89 aaKnown RBP23.9■■□□□ 1.42
VEGFB-201ENST00000309422 OTUD7AQ8TE49 926 aaPredicted RBP23.9■■□□□ 1.42
VEGFB-201ENST00000309422 ELP3Q9H9T3 547 aa23.9■■□□□ 1.42
VEGFB-201ENST00000309422 PDE1AP54750 535 aa23.89■■□□□ 1.41
VEGFB-201ENST00000309422 MKRN3Q13064 507 aaKnown RBP23.89■■□□□ 1.41
VEGFB-201ENST00000309422 VGLL4Q14135 290 aa23.89■■□□□ 1.41
VEGFB-201ENST00000309422 PI4K2BQ8TCG2 481 aa23.89■■□□□ 1.41
VEGFB-201ENST00000309422 PI4KBQ9UBF8 816 aa23.89■■□□□ 1.41
VEGFB-201ENST00000309422 THSD7BQ9C0I4 1608 aa23.89■■□□□ 1.41
VEGFB-201ENST00000309422 FAM155AB1AL88 458 aaPredicted RBP23.88■■□□□ 1.41
VEGFB-201ENST00000309422 KIF23Q02241 960 aaPredicted RBP23.88■■□□□ 1.41
VEGFB-201ENST00000309422 ZFPM1Q8IX07 1006 aa23.88■■□□□ 1.41
VEGFB-201ENST00000309422 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.88■■□□□ 1.41
VEGFB-201ENST00000309422 PICK1Q9NRD5 415 aa23.88■■□□□ 1.41
VEGFB-201ENST00000309422 STAP2Q9UGK3 403 aa23.88■■□□□ 1.41
VEGFB-201ENST00000309422 HERC5Q9UII4 1024 aaKnown RBP23.88■■□□□ 1.41
VEGFB-201ENST00000309422 DDTLA6NHG4 134 aaPredicted RBP23.87■■□□□ 1.41
VEGFB-201ENST00000309422 MANSC4A6NHS7 340 aaPredicted RBP23.87■■□□□ 1.41
VEGFB-201ENST00000309422 MBD4O95243 580 aa23.87■■□□□ 1.41
VEGFB-201ENST00000309422 EVI5LQ96CN4 794 aa23.87■■□□□ 1.41
VEGFB-201ENST00000309422 WNK4Q96J92 1243 aa23.87■■□□□ 1.41
VEGFB-201ENST00000309422 CLMNQ96JQ2 1002 aa23.87■■□□□ 1.41
VEGFB-201ENST00000309422 TRIM6-TRIM34B2RNG4 842 aa23.86■■□□□ 1.41
VEGFB-201ENST00000309422 SPRYD7Q5W111 196 aa23.86■■□□□ 1.41
VEGFB-201ENST00000309422 TTC6Q86TZ1 520 aa23.86■■□□□ 1.41
VEGFB-201ENST00000309422 APPBP2Q92624 585 aa23.86■■□□□ 1.41
VEGFB-201ENST00000309422 OPTNQ96CV9 577 aa23.86■■□□□ 1.41
VEGFB-201ENST00000309422 RIOK1Q9BRS2 568 aaKnown RBP23.86■■□□□ 1.41
VEGFB-201ENST00000309422 SALL3Q9BXA9 1300 aa23.85■■□□□ 1.41
VEGFB-201ENST00000309422 TCRBV5S4A2TA0A5A2 114 aa23.85■■□□□ 1.41
VEGFB-201ENST00000309422 RNF113AO15541 343 aaKnown RBP23.85■■□□□ 1.41
VEGFB-201ENST00000309422 POLR3DP05423 398 aaPredicted RBP23.85■■□□□ 1.41
VEGFB-201ENST00000309422 SAP30BPQ9UHR5 308 aaKnown RBP23.85■■□□□ 1.41
VEGFB-201ENST00000309422 TBC1D12O60347 775 aa23.84■■□□□ 1.41
VEGFB-201ENST00000309422 INHBEP58166 350 aa23.84■■□□□ 1.41
VEGFB-201ENST00000309422 OTUD7BQ6GQQ9 843 aa23.84■■□□□ 1.41
VEGFB-201ENST00000309422 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.84■■□□□ 1.41
VEGFB-201ENST00000309422 ERO1BQ86YB8 467 aa23.84■■□□□ 1.41
VEGFB-201ENST00000309422 OTUD5Q96G74 571 aa23.84■■□□□ 1.41
VEGFB-201ENST00000309422 ARMT1Q9H993 441 aa23.84■■□□□ 1.41
VEGFB-201ENST00000309422 WBP1LQ9NX94 342 aa23.84■■□□□ 1.41
VEGFB-201ENST00000309422 CTCFP49711 727 aaPredicted RBP23.83■■□□□ 1.41
VEGFB-201ENST00000309422 SH3BP5LQ7L8J4 393 aa23.83■■□□□ 1.41
VEGFB-201ENST00000309422 LCORLQ8N3X6 602 aa23.83■■□□□ 1.41
VEGFB-201ENST00000309422 ZKSCAN4Q969J2 545 aaPredicted RBP23.83■■□□□ 1.41
VEGFB-201ENST00000309422 AK9Q5TCS8 1911 aa23.83■■□□□ 1.41
VEGFB-201ENST00000309422 SPDYE5A6NIY4 337 aa23.82■■□□□ 1.4
VEGFB-201ENST00000309422 FOXP4Q8IVH2 680 aaPredicted RBP23.82■■□□□ 1.4
VEGFB-201ENST00000309422 SCYL3Q8IZE3 742 aa23.82■■□□□ 1.4
VEGFB-201ENST00000309422 ATP8A2Q9NTI2 1148 aa23.82■■□□□ 1.4
VEGFB-201ENST00000309422 MCM9Q9NXL9 1143 aa23.82■■□□□ 1.4
VEGFB-201ENST00000309422 PALD1Q9ULE6 856 aa23.82■■□□□ 1.4
VEGFB-201ENST00000309422 SLC4A4Q9Y6R1 1079 aa23.82■■□□□ 1.4
VEGFB-201ENST00000309422 GNAT2P19087 354 aa23.81■■□□□ 1.4
VEGFB-201ENST00000309422 INPP5BP32019 993 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms