RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 COL18A1P39060 1754 aa6.77□□□□□ -1.33
CKS1B-201ENST00000308987 PALM3A6NDB9 673 aaPredicted RBP6.77□□□□□ -1.33
CKS1B-201ENST00000308987 TRIM37O94972 964 aa6.77□□□□□ -1.33
CKS1B-201ENST00000308987 EIF2AK2P19525 551 aaKnown RBP6.77□□□□□ -1.33
CKS1B-201ENST00000308987 NRLP54845 237 aa6.77□□□□□ -1.33
CKS1B-201ENST00000308987 NFIAQ12857 509 aa6.77□□□□□ -1.33
CKS1B-201ENST00000308987 GDF6Q6KF10 455 aaPredicted RBP6.77□□□□□ -1.33
CKS1B-201ENST00000308987 ARMC10Q8N2F6 343 aa6.77□□□□□ -1.33
CKS1B-201ENST00000308987 OGFOD1Q8N543 542 aa6.77□□□□□ -1.33
CKS1B-201ENST00000308987 PLD4Q96BZ4 506 aa6.77□□□□□ -1.33
CKS1B-201ENST00000308987 COG6Q9Y2V7 657 aa6.77□□□□□ -1.33
CKS1B-201ENST00000308987 PRR19A6NJB7 356 aa6.76□□□□□ -1.33
CKS1B-201ENST00000308987 J3QW42 95 aa6.76□□□□□ -1.33
CKS1B-201ENST00000308987 IDH3AP50213 366 aa6.76□□□□□ -1.33
CKS1B-201ENST00000308987 NUTM2GQ5VZR2 741 aa6.76□□□□□ -1.33
CKS1B-201ENST00000308987 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.76□□□□□ -1.33
CKS1B-201ENST00000308987 PLEKHM2Q8IWE5 1019 aa6.76□□□□□ -1.33
CKS1B-201ENST00000308987 GAS2L2Q8NHY3 880 aa6.76□□□□□ -1.33
CKS1B-201ENST00000308987 NUDT16Q96DE0 195 aaKnown RBP6.76□□□□□ -1.33
CKS1B-201ENST00000308987 SRA1Q9HD15 236 aaKnown RBP6.76□□□□□ -1.33
CKS1B-201ENST00000308987 PRDM11Q9NQV5 511 aa6.76□□□□□ -1.33
CKS1B-201ENST00000308987 GPRASP1Q5JY77 1395 aa6.76□□□□□ -1.33
CKS1B-201ENST00000308987 CASZ1Q86V15 1759 aa6.76□□□□□ -1.33
CKS1B-201ENST00000308987 KIAA1210Q9ULL0 1709 aa6.76□□□□□ -1.33
CKS1B-201ENST00000308987 SSH2Q76I76 1423 aa6.76□□□□□ -1.33
CKS1B-201ENST00000308987 KAT6BQ8WYB5 2073 aa6.75□□□□□ -1.33
CKS1B-201ENST00000308987 DKK1O94907 266 aa6.75□□□□□ -1.33
CKS1B-201ENST00000308987 ARID4AP29374 1257 aaPredicted RBP6.75□□□□□ -1.33
CKS1B-201ENST00000308987 ZC3H6P61129 1189 aaKnown RBP6.75□□□□□ -1.33
CKS1B-201ENST00000308987 RNF43Q68DV7 783 aa6.75□□□□□ -1.33
CKS1B-201ENST00000308987 MAP4K3Q8IVH8 894 aa6.75□□□□□ -1.33
CKS1B-201ENST00000308987 TRIM42Q8IWZ5 723 aa6.75□□□□□ -1.33
CKS1B-201ENST00000308987 SIX5Q8N196 739 aa6.75□□□□□ -1.33
CKS1B-201ENST00000308987 NGDNQ8NEJ9 315 aaKnown RBP6.75□□□□□ -1.33
CKS1B-201ENST00000308987 C7orf69Q9H7B7 122 aa6.75□□□□□ -1.33
CKS1B-201ENST00000308987 C11orf16Q9NQ32 467 aa6.75□□□□□ -1.33
CKS1B-201ENST00000308987 TLR7Q9NYK1 1049 aaKnown RBP6.75□□□□□ -1.33
CKS1B-201ENST00000308987 RGPD3A6NKT7 1758 aaPredicted RBP6.74□□□□□ -1.33
CKS1B-201ENST00000308987 RGPD4Q7Z3J3 1758 aa6.74□□□□□ -1.33
CKS1B-201ENST00000308987 POLR3AO14802 1390 aaPredicted RBP6.74□□□□□ -1.33
CKS1B-201ENST00000308987 LOC102724428A0A0B4J2F2 783 aa6.74□□□□□ -1.33
CKS1B-201ENST00000308987 USP17L3A6NCW0 530 aa6.74□□□□□ -1.33
CKS1B-201ENST00000308987 USP17L4A6NCW7 530 aa6.74□□□□□ -1.33
CKS1B-201ENST00000308987 SIK1P57059 783 aa6.74□□□□□ -1.33
CKS1B-201ENST00000308987 LARP1Q6PKG0 1096 aaKnown RBP6.74□□□□□ -1.33
CKS1B-201ENST00000308987 USP17L2Q6R6M4 530 aa6.74□□□□□ -1.33
CKS1B-201ENST00000308987 USP17L1Q7RTZ2 530 aa6.74□□□□□ -1.33
CKS1B-201ENST00000308987 DCAF11Q8TEB1 546 aa6.74□□□□□ -1.33
CKS1B-201ENST00000308987 ZNF594Q96JF6 807 aaPredicted RBP6.74□□□□□ -1.33
CKS1B-201ENST00000308987 KLK14Q9P0G3 267 aa6.74□□□□□ -1.33
CKS1B-201ENST00000308987 MKRN1Q9UHC7 482 aaKnown RBP6.74□□□□□ -1.33
CKS1B-201ENST00000308987 SUPT16HQ9Y5B9 1047 aaKnown RBP6.74□□□□□ -1.33
CKS1B-201ENST00000308987 LRRC37A3O60309 1634 aa6.74□□□□□ -1.33
CKS1B-201ENST00000308987 AKAP12Q02952 1782 aa6.74□□□□□ -1.33
CKS1B-201ENST00000308987 ACEP12821 1306 aa6.74□□□□□ -1.33
CKS1B-201ENST00000308987 EIF3AQ14152 1382 aaKnown RBP6.73□□□□□ -1.33
CKS1B-201ENST00000308987 HMX2A2RU54 273 aa6.73□□□□□ -1.33
CKS1B-201ENST00000308987 CCER2I3L3R5 266 aa6.73□□□□□ -1.33
CKS1B-201ENST00000308987 ARSDP51689 593 aa6.73□□□□□ -1.33
CKS1B-201ENST00000308987 NBPF8Q3BBV2 869 aa6.73□□□□□ -1.33
CKS1B-201ENST00000308987 OGFOD2Q6N063 350 aa6.73□□□□□ -1.33
CKS1B-201ENST00000308987 FAM196AQ6ZSG2 479 aa6.73□□□□□ -1.33
CKS1B-201ENST00000308987 PTF1AQ7RTS3 328 aa6.73□□□□□ -1.33
CKS1B-201ENST00000308987 POM121Q96HA1 1249 aa6.73□□□□□ -1.33
CKS1B-201ENST00000308987 CDK19Q9BWU1 502 aa6.73□□□□□ -1.33
CKS1B-201ENST00000308987 USP35Q9P2H5 1018 aa6.73□□□□□ -1.33
CKS1B-201ENST00000308987 CHD4Q14839 1912 aa6.73□□□□□ -1.33
CKS1B-201ENST00000308987 PIK3C2AO00443 1686 aa6.73□□□□□ -1.33
CKS1B-201ENST00000308987 USP19O94966 1318 aa6.73□□□□□ -1.33
CKS1B-201ENST00000308987 COL5A2P05997 1499 aaPredicted RBP6.73□□□□□ -1.33
CKS1B-201ENST00000308987 QRICH2Q9H0J4 1663 aa6.72□□□□□ -1.33
CKS1B-201ENST00000308987 DBNDD2Q9BQY9 259 aa6.72□□□□□ -1.33
CKS1B-201ENST00000308987 PDGFDQ9GZP0 370 aaPredicted RBP6.72□□□□□ -1.33
CKS1B-201ENST00000308987 MYOM1P52179 1685 aa6.71□□□□□ -1.33
CKS1B-201ENST00000308987 CPDO75976 1380 aa6.71□□□□□ -1.33
CKS1B-201ENST00000308987 PARD3Q8TEW0 1356 aa6.71□□□□□ -1.33
CKS1B-201ENST00000308987 MICAL2O94851 1124 aa6.71□□□□□ -1.34
CKS1B-201ENST00000308987 WISP1O95388 367 aa6.71□□□□□ -1.34
CKS1B-201ENST00000308987 RASA1P20936 1047 aa6.71□□□□□ -1.34
CKS1B-201ENST00000308987 GALNT11Q8NCW6 608 aa6.71□□□□□ -1.34
CKS1B-201ENST00000308987 UTP4Q969X6 686 aaKnown RBP6.71□□□□□ -1.34
CKS1B-201ENST00000308987 CEP41Q9BYV8 373 aa6.71□□□□□ -1.34
CKS1B-201ENST00000308987 SLIT3O75094 1523 aa6.71□□□□□ -1.34
CKS1B-201ENST00000308987 POM121CA8CG34 1229 aa6.7□□□□□ -1.34
CKS1B-201ENST00000308987 GHRHP01286 108 aa6.7□□□□□ -1.34
CKS1B-201ENST00000308987 ABI1Q8IZP0 508 aa6.7□□□□□ -1.34
CKS1B-201ENST00000308987 TCP11L2Q8N4U5 519 aa6.7□□□□□ -1.34
CKS1B-201ENST00000308987 FAM46AQ96IP4 442 aaKnown RBP6.7□□□□□ -1.34
CKS1B-201ENST00000308987 TRIM33Q9UPN9 1127 aa6.7□□□□□ -1.34
CKS1B-201ENST00000308987 USP20Q9Y2K6 914 aa6.7□□□□□ -1.34
CKS1B-201ENST00000308987 PPME1Q9Y570 386 aa6.7□□□□□ -1.34
CKS1B-201ENST00000308987 OPLAHO14841 1288 aa6.69□□□□□ -1.34
CKS1B-201ENST00000308987 GCP02774 474 aa6.69□□□□□ -1.34
CKS1B-201ENST00000308987 C8AP07357 584 aa6.69□□□□□ -1.34
CKS1B-201ENST00000308987 PDE3BQ13370 1112 aa6.69□□□□□ -1.34
CKS1B-201ENST00000308987 UVSSAQ2YD98 709 aa6.69□□□□□ -1.34
CKS1B-201ENST00000308987 HDGFL1Q5TGJ6 251 aa6.69□□□□□ -1.34
CKS1B-201ENST00000308987 ACAD11Q709F0 780 aa6.69□□□□□ -1.34
CKS1B-201ENST00000308987 ABTB2Q8N961 1025 aa6.69□□□□□ -1.34
CKS1B-201ENST00000308987 SHKBP1Q8TBC3 707 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms