RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 MASTLQ96GX5 879 aa13.98□□□□□ -0.17
TRIM40-205ENST00000307859 TMEM87BQ96K49 555 aa13.98□□□□□ -0.17
TRIM40-205ENST00000307859 GPHNQ9NQX3 736 aaPredicted RBP13.98□□□□□ -0.17
TRIM40-205ENST00000307859 TACC3Q9Y6A5 838 aa13.98□□□□□ -0.17
TRIM40-205ENST00000307859 MYH1P12882 1939 aa13.98□□□□□ -0.17
TRIM40-205ENST00000307859 SH2B2O14492 632 aaPredicted RBP13.97□□□□□ -0.17
TRIM40-205ENST00000307859 JAK2O60674 1132 aa13.97□□□□□ -0.17
TRIM40-205ENST00000307859 DTNBO60941 627 aa13.97□□□□□ -0.17
TRIM40-205ENST00000307859 CTDNEP1O95476 244 aa13.97□□□□□ -0.17
TRIM40-205ENST00000307859 VEGFAP15692 232 aaPredicted RBP13.97□□□□□ -0.17
TRIM40-205ENST00000307859 CTDSPL2Q05D32 466 aa13.97□□□□□ -0.17
TRIM40-205ENST00000307859 PPARAQ07869 468 aa13.97□□□□□ -0.17
TRIM40-205ENST00000307859 KLHL40Q2TBA0 621 aa13.97□□□□□ -0.17
TRIM40-205ENST00000307859 LARP1BQ659C4 914 aaKnown RBP13.97□□□□□ -0.17
TRIM40-205ENST00000307859 DZIP1Q86YF9 867 aaKnown RBP13.97□□□□□ -0.17
TRIM40-205ENST00000307859 CHAMP1Q96JM3 812 aa13.97□□□□□ -0.17
TRIM40-205ENST00000307859 KRT23Q9C075 422 aa13.97□□□□□ -0.17
TRIM40-205ENST00000307859 BRPF3Q9ULD4 1205 aa13.97□□□□□ -0.17
TRIM40-205ENST00000307859 ANGEL1Q9UNK9 670 aaKnown RBP13.97□□□□□ -0.17
TRIM40-205ENST00000307859 LDHBP07195 334 aaKnown RBP13.97□□□□□ -0.17
TRIM40-205ENST00000307859 HMGN5P82970 282 aaKnown RBP13.97□□□□□ -0.17
TRIM40-205ENST00000307859 MFSD6Q6ZSS7 791 aa13.97□□□□□ -0.17
TRIM40-205ENST00000307859 MTA3Q9BTC8 594 aa13.97□□□□□ -0.17
TRIM40-205ENST00000307859 RNF41Q9H4P4 317 aaPredicted RBP13.97□□□□□ -0.17
TRIM40-205ENST00000307859 HPS5Q9UPZ3 1129 aa13.97□□□□□ -0.17
TRIM40-205ENST00000307859 JAG2Q9Y219 1238 aa13.97□□□□□ -0.17
TRIM40-205ENST00000307859 ATP6V1DQ9Y5K8 247 aa13.97□□□□□ -0.17
TRIM40-205ENST00000307859 KLF18A0A0U1RQI7 1052 aa13.96□□□□□ -0.17
TRIM40-205ENST00000307859 KCNA3P22001 575 aa13.96□□□□□ -0.17
TRIM40-205ENST00000307859 TMEM87AQ8NBN3 555 aa13.96□□□□□ -0.17
TRIM40-205ENST00000307859 CRNKL1Q9BZJ0 848 aaKnown RBP13.96□□□□□ -0.17
TRIM40-205ENST00000307859 PIM2Q9P1W9 311 aa13.96□□□□□ -0.17
TRIM40-205ENST00000307859 PSME4Q14997 1843 aa13.96□□□□□ -0.18
TRIM40-205ENST00000307859 ARFGEF1Q9Y6D6 1849 aa13.96□□□□□ -0.18
TRIM40-205ENST00000307859 FAM205AQ6ZU69 1335 aa13.95□□□□□ -0.18
TRIM40-205ENST00000307859 PTPDC1A2A3K4 754 aa13.95□□□□□ -0.18
TRIM40-205ENST00000307859 VPS37CA5D8V6 355 aaPredicted RBP13.95□□□□□ -0.18
TRIM40-205ENST00000307859 C6orf229H3BNL8 230 aa13.95□□□□□ -0.18
TRIM40-205ENST00000307859 FOXN1O15353 648 aa13.95□□□□□ -0.18
TRIM40-205ENST00000307859 PRPF40AO75400 957 aaKnown RBP13.95□□□□□ -0.18
TRIM40-205ENST00000307859 PCP11498 1178 aaKnown RBP13.95□□□□□ -0.18
TRIM40-205ENST00000307859 LIFRP42702 1097 aa13.95□□□□□ -0.18
TRIM40-205ENST00000307859 CTCFP49711 727 aaPredicted RBP13.95□□□□□ -0.18
TRIM40-205ENST00000307859 CCT2P78371 535 aaKnown RBP13.95□□□□□ -0.18
TRIM40-205ENST00000307859 GSTO1P78417 241 aa13.95□□□□□ -0.18
TRIM40-205ENST00000307859 STYK1Q6J9G0 422 aa13.95□□□□□ -0.18
TRIM40-205ENST00000307859 CDC37L1Q7L3B6 337 aa13.95□□□□□ -0.18
TRIM40-205ENST00000307859 SGMS1Q86VZ5 419 aa13.95□□□□□ -0.18
TRIM40-205ENST00000307859 IGDCC4Q8TDY8 1250 aa13.95□□□□□ -0.18
TRIM40-205ENST00000307859 NCOA5Q9HCD5 579 aaKnown RBP13.95□□□□□ -0.18
TRIM40-205ENST00000307859 INCENPQ9NQS7 918 aa13.95□□□□□ -0.18
TRIM40-205ENST00000307859 ATP8A2Q9NTI2 1148 aa13.95□□□□□ -0.18
TRIM40-205ENST00000307859 AATFQ9NY61 560 aaKnown RBP eCLIP13.95□□□□□ -0.18
TRIM40-205ENST00000307859 ZSWIM5Q9P217 1185 aa13.95□□□□□ -0.18
TRIM40-205ENST00000307859 GOLGA8BA8MQT2 603 aa13.94□□□□□ -0.18
TRIM40-205ENST00000307859 KDM4AO75164 1064 aa13.94□□□□□ -0.18
TRIM40-205ENST00000307859 FGRP09769 529 aa13.94□□□□□ -0.18
TRIM40-205ENST00000307859 GRIK5Q16478 980 aa13.94□□□□□ -0.18
TRIM40-205ENST00000307859 DALRD3Q5D0E6 543 aaKnown RBP13.94□□□□□ -0.18
TRIM40-205ENST00000307859 MPNDQ8N594 471 aa13.94□□□□□ -0.18
TRIM40-205ENST00000307859 LY9Q9HBG7 655 aa13.94□□□□□ -0.18
TRIM40-205ENST00000307859 CREBZFQ9NS37 354 aa13.94□□□□□ -0.18
TRIM40-205ENST00000307859 DDX49Q9Y6V7 483 aaKnown RBP13.94□□□□□ -0.18
TRIM40-205ENST00000307859 BRCA1P38398 1863 aaKnown RBP13.94□□□□□ -0.18
TRIM40-205ENST00000307859 NID2Q14112 1375 aa13.94□□□□□ -0.18
TRIM40-205ENST00000307859 SCN9AQ15858 1988 aa13.94□□□□□ -0.18
TRIM40-205ENST00000307859 MYH8P13535 1937 aa13.94□□□□□ -0.18
TRIM40-205ENST00000307859 DHX16O60231 1041 aaKnown RBP13.93□□□□□ -0.18
TRIM40-205ENST00000307859 PPP4CP60510 307 aa13.93□□□□□ -0.18
TRIM40-205ENST00000307859 SBK1Q52WX2 424 aa13.93□□□□□ -0.18
TRIM40-205ENST00000307859 CTR9Q6PD62 1173 aa13.93□□□□□ -0.18
TRIM40-205ENST00000307859 C2CD5Q86YS7 1000 aa13.93□□□□□ -0.18
TRIM40-205ENST00000307859 FAM184AQ8NB25 1140 aa13.93□□□□□ -0.18
TRIM40-205ENST00000307859 TBC1D22AQ8WUA7 517 aa13.93□□□□□ -0.18
TRIM40-205ENST00000307859 COA1Q9GZY4 146 aa13.93□□□□□ -0.18
TRIM40-205ENST00000307859 DCP1AQ9NPI6 582 aaPredicted RBP13.93□□□□□ -0.18
TRIM40-205ENST00000307859 NAP1L2Q9ULW6 460 aaPredicted RBP13.93□□□□□ -0.18
TRIM40-205ENST00000307859 KIF3AQ9Y496 699 aa13.93□□□□□ -0.18
TRIM40-205ENST00000307859 MROH7-TTC4A0A0A0MT08 1334 aa13.93□□□□□ -0.18
TRIM40-205ENST00000307859 GLTPD2A6NH11 291 aa13.93□□□□□ -0.18
TRIM40-205ENST00000307859 MINDY4BA8MYZ0 360 aa13.93□□□□□ -0.18
TRIM40-205ENST00000307859 LDHCP07864 332 aa13.93□□□□□ -0.18
TRIM40-205ENST00000307859 RGS19P49795 217 aa13.93□□□□□ -0.18
TRIM40-205ENST00000307859 TMEM67Q5HYA8 995 aa13.93□□□□□ -0.18
TRIM40-205ENST00000307859 APOA5Q6Q788 366 aa13.93□□□□□ -0.18
TRIM40-205ENST00000307859 CERS3Q8IU89 383 aa13.93□□□□□ -0.18
TRIM40-205ENST00000307859 DDX11Q96FC9 970 aa13.93□□□□□ -0.18
TRIM40-205ENST00000307859 ARPP21Q9UBL0 812 aaPredicted RBP13.93□□□□□ -0.18
TRIM40-205ENST00000307859 ADAMTSL1Q8N6G6 1762 aa13.93□□□□□ -0.18
TRIM40-205ENST00000307859 SNED1Q8TER0 1413 aa13.92□□□□□ -0.18
TRIM40-205ENST00000307859 H0YIN7 160 aa13.92□□□□□ -0.18
TRIM40-205ENST00000307859 MLLT1Q03111 559 aaPredicted RBP13.92□□□□□ -0.18
TRIM40-205ENST00000307859 DPP8Q6V1X1 898 aaPredicted RBP13.92□□□□□ -0.18
TRIM40-205ENST00000307859 GPT2Q8TD30 523 aa13.92□□□□□ -0.18
TRIM40-205ENST00000307859 ABHD8Q96I13 439 aa13.92□□□□□ -0.18
TRIM40-205ENST00000307859 RTFDC1Q9BY42 306 aaPredicted RBP13.92□□□□□ -0.18
TRIM40-205ENST00000307859 SENP2Q9HC62 589 aa13.92□□□□□ -0.18
TRIM40-205ENST00000307859 MKRN1Q9UHC7 482 aaKnown RBP13.92□□□□□ -0.18
TRIM40-205ENST00000307859 USP17L12C9JPN9 530 aa13.91□□□□□ -0.18
TRIM40-205ENST00000307859 USP17L21D6R901 530 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms