RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 COL9A3Q14050 684 aaPredicted RBP15.19■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 NCOA7Q8NI08 942 aa15.19■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 TEKT1Q969V4 418 aa15.19■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 ZDHHC15Q96MV8 337 aa15.19■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 NBPF3Q9H094 633 aa15.19■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 CHMP5Q9NZZ3 219 aa15.19■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 SERPINA10Q9UK55 444 aa15.19■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 LAMA4Q16363 1823 aa15.18■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 PLCG2P16885 1265 aa15.18■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 BTDP43251 543 aa15.18■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 TDO2P48775 406 aa15.18■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 RHBDL3P58872 404 aa15.18■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 HAND2P61296 217 aa15.18■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 TOB2Q14106 344 aaPredicted RBP15.18■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 APOBEC3HQ6NTF7 200 aaKnown RBP15.18■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 MB21D2Q8IYB1 491 aaPredicted RBP15.18■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 AATFQ9NY61 560 aaKnown RBP eCLIP15.18■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 USP17L8P0C7I0 530 aa15.17■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 GMPSP49915 693 aaPredicted RBP15.17■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 ZNF280AP59817 542 aaPredicted RBP15.17■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 SBK1Q52WX2 424 aa15.17■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 GPC2Q8N158 579 aa15.17■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 DPF2Q92785 391 aa15.17■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 NOL10Q9BSC4 688 aaKnown RBP15.17■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 SLKQ9H2G2 1235 aaPredicted RBP15.17■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 CNNM2Q9H8M5 875 aa15.17■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 MKRN1Q9UHC7 482 aaKnown RBP15.17■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 PCDHAC2Q9Y5I4 1007 aa15.17■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 PCP11498 1178 aaKnown RBP15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 MCM5P33992 734 aa15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 MMP14P50281 582 aa15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 EVCP57679 992 aa15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 TRDNQ13061 729 aa15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 AKNAD1Q5T1N1 836 aa15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 TBC1D10CQ8IV04 446 aa15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 SPRYD3Q8NCJ5 442 aa15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 SH3RF3Q8TEJ3 882 aaPredicted RBP15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 SDR42E1Q8WUS8 393 aa15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 STAG1Q8WVM7 1258 aa15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 MTA3Q9BTC8 594 aa15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 RNF41Q9H4P4 317 aaPredicted RBP15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 DCP1AQ9NPI6 582 aaPredicted RBP15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 ZC3H4Q9UPT8 1303 aaKnown RBP15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 SHTN1A0MZ66 631 aa15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 FGRP09769 529 aa15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 NT5C2P49902 561 aa15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 Q6ZUG5 572 aa15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 RALYLQ86SE5 291 aaKnown RBP15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 MTMR14Q8NCE2 650 aa15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 ZBED3Q96IU2 234 aaPredicted RBP15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 TPCN1Q9ULQ1 816 aa15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 GJA3Q9Y6H8 435 aa15.16■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 PPARAQ07869 468 aa15.15■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 CFAP100Q494V2 611 aa15.15■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 CTR9Q6PD62 1173 aa15.15■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 KRT23Q9C075 422 aa15.15■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 HDAC9Q9UKV0 1011 aa15.15■□□□□ 0.02
SHANK2-AS3-201ENST00000307548 SPDYE2BA6NHP3 402 aa15.14■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 SPDYE6P0CI01 402 aa15.14■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 YY1P25490 414 aa15.14■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 ME3Q16798 604 aa15.14■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 CDC42EP5Q6NZY7 148 aa15.14■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 MFSD6Q6ZSS7 791 aa15.14■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 OGFOD1Q8N543 542 aa15.14■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 PRMT6Q96LA8 375 aaPredicted RBP15.14■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 CDK5RAP2Q96SN8 1893 aa15.14■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 ARPP21Q9UBL0 812 aaPredicted RBP15.14■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 WDHD1O75717 1129 aaPredicted RBP15.13■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 NOL8Q76FK4 1167 aaKnown RBP15.13■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 ZNF274Q96GC6 653 aaPredicted RBP15.13■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 TMEM87BQ96K49 555 aa15.13■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 TCEANC2Q96MN5 208 aa15.13■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.13■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 DDX60LQ5H9U9 1706 aaKnown RBP15.13■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 USP17L12C9JPN9 530 aa15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 USP17L21D6R901 530 aa15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 PRC1O43663 620 aa15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 DDNO94850 711 aaPredicted RBP15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 ANTXR2P58335 489 aa15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 CTDSPL2Q05D32 466 aa15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 MICALL2Q8IY33 904 aa15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 CHMP4CQ96CF2 233 aa15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 GPRC5DQ9NZD1 345 aa15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 CNOT7Q9UIV1 285 aaKnown RBP15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 TACC3Q9Y6A5 838 aa15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 FOCADQ5VW36 1801 aa15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 LARGE1O95461 756 aa15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 EGFRP00533 1210 aa15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 NUCB2P80303 420 aa15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 DLGAP5Q15398 846 aa15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 TEX11Q8IYF3 940 aa15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 BRF1Q92994 677 aa15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 MYOZ2Q9NPC6 264 aa15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 USP40Q9NVE5 1235 aa15.12■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 ECM29Q5VYK3 1845 aa15.11■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 NEDD4P46934 1319 aa15.11■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 MINDY4BA8MYZ0 360 aa15.11■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 SLC3A2P08195 630 aaKnown RBP15.11■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 USP5P45974 858 aa15.11■□□□□ 0.01
SHANK2-AS3-201ENST00000307548 RBM5P52756 815 aaKnown RBP eCLIP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms