RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 CEBPZQ03701 1054 aaKnown RBP7.65□□□□□ -1.18
USP47-201ENST00000305481 GIMAP6Q6P9H5 292 aa7.65□□□□□ -1.18
USP47-201ENST00000305481 RNF214Q8ND24 703 aa7.65□□□□□ -1.18
USP47-201ENST00000305481 RCOR1Q9UKL0 485 aa7.65□□□□□ -1.18
USP47-201ENST00000305481 HOXA10P31260 410 aaPredicted RBP7.65□□□□□ -1.18
USP47-201ENST00000305481 RBM6P78332 1123 aaKnown RBP7.65□□□□□ -1.18
USP47-201ENST00000305481 ST5P78524 1137 aa7.65□□□□□ -1.18
USP47-201ENST00000305481 NFXL1Q6ZNB6 911 aa7.65□□□□□ -1.18
USP47-201ENST00000305481 C15orf52Q6ZUT6 534 aaKnown RBP7.65□□□□□ -1.18
USP47-201ENST00000305481 PHKBQ93100 1093 aa7.65□□□□□ -1.18
USP47-201ENST00000305481 C8orf76Q96K31 380 aa7.65□□□□□ -1.18
USP47-201ENST00000305481 CFAP45Q9UL16 551 aa7.65□□□□□ -1.18
USP47-201ENST00000305481 KIF28PB7ZC32 967 aa7.65□□□□□ -1.19
USP47-201ENST00000305481 FGRP09769 529 aa7.65□□□□□ -1.19
USP47-201ENST00000305481 SEC23AQ15436 765 aa7.65□□□□□ -1.19
USP47-201ENST00000305481 AKT1S1Q96B36 256 aa7.65□□□□□ -1.19
USP47-201ENST00000305481 TOMM22Q9NS69 142 aa7.65□□□□□ -1.19
USP47-201ENST00000305481 SLC12A7Q9Y666 1083 aa7.65□□□□□ -1.19
USP47-201ENST00000305481 GOLGB1Q14789 3259 aaKnown RBP7.65□□□□□ -1.19
USP47-201ENST00000305481 NID2Q14112 1375 aa7.65□□□□□ -1.19
USP47-201ENST00000305481 USP17L12C9JPN9 530 aa7.64□□□□□ -1.19
USP47-201ENST00000305481 USP17L21D6R901 530 aa7.64□□□□□ -1.19
USP47-201ENST00000305481 COL23A1Q86Y22 540 aaPredicted RBP7.64□□□□□ -1.19
USP47-201ENST00000305481 RBM17Q96I25 401 aaKnown RBP7.64□□□□□ -1.19
USP47-201ENST00000305481 RNF41Q9H4P4 317 aaPredicted RBP7.64□□□□□ -1.19
USP47-201ENST00000305481 DCP1AQ9NPI6 582 aaPredicted RBP7.64□□□□□ -1.19
USP47-201ENST00000305481 DACT1Q9NYF0 836 aa7.64□□□□□ -1.19
USP47-201ENST00000305481 GOLGA8AA7E2F4 631 aa7.64□□□□□ -1.19
USP47-201ENST00000305481 PLSCR1O15162 318 aa7.64□□□□□ -1.19
USP47-201ENST00000305481 NR1I2O75469 434 aa7.64□□□□□ -1.19
USP47-201ENST00000305481 LETM1O95202 739 aaPredicted RBP7.64□□□□□ -1.19
USP47-201ENST00000305481 POLLQ9UGP5 575 aa7.64□□□□□ -1.19
USP47-201ENST00000305481 MAST2Q6P0Q8 1798 aa7.64□□□□□ -1.19
USP47-201ENST00000305481 DUOX1Q9NRD9 1551 aa7.64□□□□□ -1.19
USP47-201ENST00000305481 CCDC69A6NI79 296 aa7.64□□□□□ -1.19
USP47-201ENST00000305481 PRDM1O75626 825 aa7.64□□□□□ -1.19
USP47-201ENST00000305481 POLR3DP05423 398 aaPredicted RBP7.64□□□□□ -1.19
USP47-201ENST00000305481 KIF23Q02241 960 aaPredicted RBP7.64□□□□□ -1.19
USP47-201ENST00000305481 CCDC173Q0VFZ6 552 aa7.64□□□□□ -1.19
USP47-201ENST00000305481 WTAPQ15007 396 aa7.64□□□□□ -1.19
USP47-201ENST00000305481 MTA3Q9BTC8 594 aa7.64□□□□□ -1.19
USP47-201ENST00000305481 BBOX1O75936 387 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 UFL1O94874 794 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 CYP2D6P10635 497 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 GUCY1A2P33402 732 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 CAMK4Q16566 473 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 ATL3Q6DD88 541 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 ENAHQ8N8S7 591 aaPredicted RBP7.63□□□□□ -1.19
USP47-201ENST00000305481 PDLIM2Q96JY6 352 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 CRAMP1Q96RY5 1269 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 ALG1Q9BT22 464 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 CD209Q9NNX6 404 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 MKRN1Q9UHC7 482 aaKnown RBP7.63□□□□□ -1.19
USP47-201ENST00000305481 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.63□□□□□ -1.19
USP47-201ENST00000305481 ECM29Q5VYK3 1845 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 CCDC88AQ3V6T2 1871 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 ANKRD31Q8N7Z5 1873 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 TNKSO95271 1327 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 CDKL5O76039 1030 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 APBA3O96018 575 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 IARSP41252 1262 aaKnown RBP7.63□□□□□ -1.19
USP47-201ENST00000305481 DIXDC1Q155Q3 683 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 ZNF772Q68DY9 489 aaPredicted RBP7.63□□□□□ -1.19
USP47-201ENST00000305481 ZNF804AQ7Z570 1209 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 NBPF11Q86T75 865 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 WDR66Q8TBY9 1149 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 ESR2Q92731 530 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 CRNKL1Q9BZJ0 848 aaKnown RBP7.63□□□□□ -1.19
USP47-201ENST00000305481 ZMYND15Q9H091 742 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 GOLPH3LQ9H4A5 285 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 ATP8A2Q9NTI2 1148 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 CLIC4Q9Y696 253 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 MYH2Q9UKX2 1941 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 LTBP1Q14766 1721 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 GOLGA6L4A6NEF3 574 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 FMNL1O95466 1100 aaPredicted RBP7.63□□□□□ -1.19
USP47-201ENST00000305481 LDHBP07195 334 aaKnown RBP7.63□□□□□ -1.19
USP47-201ENST00000305481 IL1R1P14778 569 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 IFNAR1P17181 557 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 ATP2B4P23634 1241 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 SART3Q15020 963 aaKnown RBP7.63□□□□□ -1.19
USP47-201ENST00000305481 SPTY2D1Q68D10 685 aaPredicted RBP7.63□□□□□ -1.19
USP47-201ENST00000305481 KRT40Q6A162 431 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 DZIP1Q86YF9 867 aaKnown RBP7.63□□□□□ -1.19
USP47-201ENST00000305481 ZNF654Q8IZM8 581 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 CMTR1Q8N1G2 835 aaKnown RBP7.63□□□□□ -1.19
USP47-201ENST00000305481 RGS22Q8NE09 1264 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 TBC1D16Q8TBP0 767 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 ZNF396Q96N95 335 aaPredicted RBP7.63□□□□□ -1.19
USP47-201ENST00000305481 RRAGDQ9NQL2 400 aaPredicted RBP7.63□□□□□ -1.19
USP47-201ENST00000305481 RTEL1Q9NZ71 1219 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 GGA1Q9UJY5 639 aa7.63□□□□□ -1.19
USP47-201ENST00000305481 KIAA1551Q9HCM1 1747 aa7.62□□□□□ -1.19
USP47-201ENST00000305481 MYSM1Q5VVJ2 828 aa7.62□□□□□ -1.19
USP47-201ENST00000305481 TMED8Q6PL24 325 aaPredicted RBP7.62□□□□□ -1.19
USP47-201ENST00000305481 RBM43Q6ZSC3 357 aaKnown RBP7.62□□□□□ -1.19
USP47-201ENST00000305481 TMTC2Q8N394 836 aa7.62□□□□□ -1.19
USP47-201ENST00000305481 SH3RF3Q8TEJ3 882 aaPredicted RBP7.62□□□□□ -1.19
USP47-201ENST00000305481 ZSCAN10Q96SZ4 725 aaPredicted RBP7.62□□□□□ -1.19
USP47-201ENST00000305481 UBAC1Q9BSL1 405 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms