RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 NBPF6Q5VWK0 638 aa8.54□□□□□ -1.04
SF3B3-201ENST00000302516 NBPF4Q96M43 638 aa8.54□□□□□ -1.04
SF3B3-201ENST00000302516 FLOT1O75955 427 aa8.54□□□□□ -1.04
SF3B3-201ENST00000302516 UHRF1BP1LA0JNW5 1464 aa8.54□□□□□ -1.04
SF3B3-201ENST00000302516 RBM26Q5T8P6 1007 aaKnown RBP8.54□□□□□ -1.04
SF3B3-201ENST00000302516 KDM2BQ8NHM5 1336 aa8.54□□□□□ -1.04
SF3B3-201ENST00000302516 RIOK3O14730 519 aaKnown RBP8.54□□□□□ -1.04
SF3B3-201ENST00000302516 ZNF500O60304 480 aaPredicted RBP8.54□□□□□ -1.04
SF3B3-201ENST00000302516 PAK1Q13153 545 aa8.54□□□□□ -1.04
SF3B3-201ENST00000302516 ANO1Q5XXA6 986 aa8.54□□□□□ -1.04
SF3B3-201ENST00000302516 DENND2CQ68D51 928 aa8.54□□□□□ -1.04
SF3B3-201ENST00000302516 RPUSD2Q8IZ73 545 aaKnown RBP8.54□□□□□ -1.04
SF3B3-201ENST00000302516 MAIP1Q8WWC4 291 aa8.54□□□□□ -1.04
SF3B3-201ENST00000302516 ADGRL2O95490 1459 aa8.54□□□□□ -1.04
SF3B3-201ENST00000302516 ABCC10Q5T3U5 1492 aa8.54□□□□□ -1.04
SF3B3-201ENST00000302516 GOLGA8KD6RF30 607 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 HOXB7P09629 217 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 ERCC5P28715 1186 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-201ENST00000302516 WAPLQ7Z5K2 1190 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 VIMP08670 466 aaKnown RBP8.53□□□□□ -1.04
SF3B3-201ENST00000302516 IBTKQ9P2D0 1353 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-201ENST00000302516 EDC4Q6P2E9 1401 aaKnown RBP8.53□□□□□ -1.04
SF3B3-201ENST00000302516 CCDC84Q86UT8 332 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-201ENST00000302516 CEP120Q8N960 986 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 NOC4LQ9BVI4 516 aaKnown RBP8.53□□□□□ -1.04
SF3B3-201ENST00000302516 CROCC2H7BZ55 1655 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 GNA14O95837 355 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 KCNH3Q9ULD8 1083 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 TRIM37O94972 964 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 HPDP32754 393 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-201ENST00000302516 SKAP1Q86WV1 359 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 STX10O60499 249 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 WDR44Q5JSH3 913 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 TTC37Q6PGP7 1564 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 CETN3O15182 167 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 MCM7P33993 719 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 ELF2Q15723 593 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 SLC9C2Q5TAH2 1124 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 CDC25BP30305 580 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 SMTNP53814 917 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 FANCCQ00597 558 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 ARID5AQ03989 594 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 ASIC2Q16515 512 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 LGSNQ5TDP6 509 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 P3H4Q92791 437 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 ANKRD2Q9GZV1 360 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 EXOC7Q9UPT5 735 aa8.53□□□□□ -1.04
SF3B3-201ENST00000302516 SAMD9Q5K651 1589 aa8.52□□□□□ -1.04
SF3B3-201ENST00000302516 NUP153P49790 1475 aaKnown RBP8.52□□□□□ -1.04
SF3B3-201ENST00000302516 PLCH2O75038 1416 aa8.52□□□□□ -1.04
SF3B3-201ENST00000302516 APBA1Q02410 837 aa8.52□□□□□ -1.04
SF3B3-201ENST00000302516 SLC9C1Q4G0N8 1177 aa8.52□□□□□ -1.04
SF3B3-201ENST00000302516 CCDC25Q86WR0 208 aa8.52□□□□□ -1.04
SF3B3-201ENST00000302516 NUF2Q9BZD4 464 aa8.52□□□□□ -1.04
SF3B3-201ENST00000302516 RABGAP1Q9Y3P9 1069 aa8.52□□□□□ -1.04
SF3B3-201ENST00000302516 TMEM110-MUSTN1A8MSY1 372 aa8.52□□□□□ -1.05
SF3B3-201ENST00000302516 PLCB3Q01970 1234 aa8.52□□□□□ -1.05
SF3B3-201ENST00000302516 VPS52Q8N1B4 723 aa8.52□□□□□ -1.05
SF3B3-201ENST00000302516 USHBP1Q8N6Y0 703 aa8.52□□□□□ -1.05
SF3B3-201ENST00000302516 FAM169AQ9Y6X4 670 aa8.52□□□□□ -1.05
SF3B3-201ENST00000302516 GKAP1Q5VSY0 366 aaPredicted RBP8.52□□□□□ -1.05
SF3B3-201ENST00000302516 RNF10Q8N5U6 811 aaKnown RBP8.52□□□□□ -1.05
SF3B3-201ENST00000302516 ATP7AQ04656 1500 aa8.52□□□□□ -1.05
SF3B3-201ENST00000302516 PARP1P09874 1014 aaKnown RBP8.52□□□□□ -1.05
SF3B3-201ENST00000302516 TBC1D31Q96DN5 1066 aa8.52□□□□□ -1.05
SF3B3-201ENST00000302516 LAMC1P11047 1609 aa8.52□□□□□ -1.05
SF3B3-201ENST00000302516 ZC3H6P61129 1189 aaKnown RBP8.52□□□□□ -1.05
SF3B3-201ENST00000302516 RAPGEF3O95398 923 aa8.52□□□□□ -1.05
SF3B3-201ENST00000302516 ZNF853P0CG23 659 aa8.52□□□□□ -1.05
SF3B3-201ENST00000302516 NBPF5PQ86XG9 351 aaPredicted RBP8.52□□□□□ -1.05
SF3B3-201ENST00000302516 RUNDC3BQ96NL0 473 aa8.52□□□□□ -1.05
SF3B3-201ENST00000302516 ZBTB3Q9H5J0 574 aa8.52□□□□□ -1.05
SF3B3-201ENST00000302516 VAT1LQ9HCJ6 419 aa8.52□□□□□ -1.05
SF3B3-201ENST00000302516 VCX3AQ9NNX9 186 aa8.52□□□□□ -1.05
SF3B3-201ENST00000302516 WDR7Q9Y4E6 1490 aa8.52□□□□□ -1.05
SF3B3-201ENST00000302516 OAS2P29728 719 aaKnown RBP8.52□□□□□ -1.05
SF3B3-201ENST00000302516 GOLGA5Q8TBA6 731 aa8.52□□□□□ -1.05
SF3B3-201ENST00000302516 PPP1R9BQ96SB3 815 aa8.52□□□□□ -1.05
SF3B3-201ENST00000302516 TNRQ92752 1358 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 EFCAB8A8MWE9 144 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 MAP2K2P36507 400 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 ITIH3Q06033 890 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 APOBRQ0VD83 1088 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 TRIM58Q8NG06 486 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 ANGEL1Q9UNK9 670 aaKnown RBP8.51□□□□□ -1.05
SF3B3-201ENST00000302516 CLGNO14967 610 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 SPOPO43791 374 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 FAM71BQ8TC56 605 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 RBSNQ9H1K0 784 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 SH2D4AQ9H788 454 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 RAB11FIP4Q86YS3 637 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 Q9H521 79 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 CCT6AP40227 531 aaKnown RBP8.51□□□□□ -1.05
SF3B3-201ENST00000302516 LRRC2Q9BYS8 371 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 ACEP12821 1306 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 UTP14CQ5TAP6 766 aaKnown RBP8.51□□□□□ -1.05
SF3B3-201ENST00000302516 ARHGEF10O15013 1369 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 FAM83GA6ND36 823 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 ATP8B1O43520 1251 aa8.51□□□□□ -1.05
SF3B3-201ENST00000302516 ARL1P40616 181 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms