RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 SMIM22K7EJ46 135 aa14.92□□□□□ -0.02
HIF3A-204ENST00000300862 SYKP43405 635 aa14.92□□□□□ -0.02
HIF3A-204ENST00000300862 NAA30Q147X3 362 aaPredicted RBP14.92□□□□□ -0.02
HIF3A-204ENST00000300862 LMOD1P29536 600 aaPredicted RBP14.91□□□□□ -0.02
HIF3A-204ENST00000300862 TDO2P48775 406 aa14.91□□□□□ -0.02
HIF3A-204ENST00000300862 EIF5P55010 431 aaKnown RBP14.91□□□□□ -0.02
HIF3A-204ENST00000300862 CCZ1BP86790 482 aa14.91□□□□□ -0.02
HIF3A-204ENST00000300862 CCZ1P86791 482 aaPredicted RBP14.91□□□□□ -0.02
HIF3A-204ENST00000300862 NCBP1Q09161 790 aaKnown RBP14.91□□□□□ -0.02
HIF3A-204ENST00000300862 PTPAQ15257 358 aa14.91□□□□□ -0.02
HIF3A-204ENST00000300862 KCNJ14Q9UNX9 436 aa14.91□□□□□ -0.02
HIF3A-204ENST00000300862 SLC4A4Q9Y6R1 1079 aa14.91□□□□□ -0.02
HIF3A-204ENST00000300862 DISP2A7MBM2 1401 aa14.91□□□□□ -0.02
HIF3A-204ENST00000300862 C4AP0C0L4 1744 aa14.91□□□□□ -0.02
HIF3A-204ENST00000300862 C4BP0C0L5 1744 aa14.91□□□□□ -0.02
HIF3A-204ENST00000300862 ATP6V1AP38606 617 aa14.91□□□□□ -0.02
HIF3A-204ENST00000300862 CRKLP46109 303 aaKnown RBP14.91□□□□□ -0.02
HIF3A-204ENST00000300862 PNOCQ13519 176 aa14.91□□□□□ -0.02
HIF3A-204ENST00000300862 TRIM29Q14134 588 aa14.91□□□□□ -0.02
HIF3A-204ENST00000300862 UTP14AQ9BVJ6 771 aaKnown RBP14.91□□□□□ -0.02
HIF3A-204ENST00000300862 STRCQ7RTU9 1775 aa14.91□□□□□ -0.02
HIF3A-204ENST00000300862 NLRP12P59046 1061 aa14.9□□□□□ -0.02
HIF3A-204ENST00000300862 AKNAD1Q5T1N1 836 aa14.9□□□□□ -0.02
HIF3A-204ENST00000300862 MFSD6Q6ZSS7 791 aa14.9□□□□□ -0.02
HIF3A-204ENST00000300862 MAP3K14Q99558 947 aa14.9□□□□□ -0.02
HIF3A-204ENST00000300862 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.9□□□□□ -0.02
HIF3A-204ENST00000300862 BTBD18B2RXH4 712 aa14.9□□□□□ -0.02
HIF3A-204ENST00000300862 ATP1A3P13637 1013 aa14.9□□□□□ -0.02
HIF3A-204ENST00000300862 NCAPHQ15003 741 aa14.9□□□□□ -0.02
HIF3A-204ENST00000300862 ALX1Q15699 326 aa14.9□□□□□ -0.02
HIF3A-204ENST00000300862 PTPN21Q16825 1174 aa14.9□□□□□ -0.02
HIF3A-204ENST00000300862 TMC6Q7Z403 805 aa14.9□□□□□ -0.02
HIF3A-204ENST00000300862 SGMS1Q86VZ5 419 aa14.9□□□□□ -0.02
HIF3A-204ENST00000300862 LRP2BPQ9P2M1 347 aa14.9□□□□□ -0.02
HIF3A-204ENST00000300862 NIP7Q9Y221 180 aaKnown RBP eCLIP14.9□□□□□ -0.02
HIF3A-204ENST00000300862 KIF20AO95235 890 aa14.89□□□□□ -0.03
HIF3A-204ENST00000300862 ADAMTS2O95450 1211 aa14.89□□□□□ -0.03
HIF3A-204ENST00000300862 SSRP1Q08945 709 aaKnown RBP14.89□□□□□ -0.03
HIF3A-204ENST00000300862 CCDC87Q9NVE4 849 aa14.89□□□□□ -0.03
HIF3A-204ENST00000300862 ABCF2Q9UG63 623 aa14.89□□□□□ -0.03
HIF3A-204ENST00000300862 DDX60Q8IY21 1712 aaKnown RBP14.89□□□□□ -0.03
HIF3A-204ENST00000300862 TULP1O00294 542 aaPredicted RBP14.89□□□□□ -0.03
HIF3A-204ENST00000300862 ATP2B1P20020 1258 aa14.89□□□□□ -0.03
HIF3A-204ENST00000300862 RBM6P78332 1123 aaKnown RBP14.89□□□□□ -0.03
HIF3A-204ENST00000300862 CEP135Q66GS9 1140 aa14.89□□□□□ -0.03
HIF3A-204ENST00000300862 ADGRA1Q86SQ6 560 aa14.89□□□□□ -0.03
HIF3A-204ENST00000300862 NUP133Q8WUM0 1156 aa14.89□□□□□ -0.03
HIF3A-204ENST00000300862 SDR42E1Q8WUS8 393 aa14.89□□□□□ -0.03
HIF3A-204ENST00000300862 FOXN1O15353 648 aa14.88□□□□□ -0.03
HIF3A-204ENST00000300862 GRIN1Q05586 938 aa14.88□□□□□ -0.03
HIF3A-204ENST00000300862 ITPK1Q13572 414 aa14.88□□□□□ -0.03
HIF3A-204ENST00000300862 LONRF3Q496Y0 759 aa14.88□□□□□ -0.03
HIF3A-204ENST00000300862 HPSEQ9Y251 543 aa14.88□□□□□ -0.03
HIF3A-204ENST00000300862 SMTNL1A8MU46 457 aa14.88□□□□□ -0.03
HIF3A-204ENST00000300862 MINDY4BA8MYZ0 360 aa14.88□□□□□ -0.03
HIF3A-204ENST00000300862 CAMTA2O94983 1202 aa14.88□□□□□ -0.03
HIF3A-204ENST00000300862 IGHMBP2P38935 993 aaKnown RBP14.88□□□□□ -0.03
HIF3A-204ENST00000300862 LIFRP42702 1097 aa14.88□□□□□ -0.03
HIF3A-204ENST00000300862 CHRNDQ07001 517 aa14.88□□□□□ -0.03
HIF3A-204ENST00000300862 ANKRD36CQ5JPF3 1778 aa14.88□□□□□ -0.03
HIF3A-204ENST00000300862 FOXP4Q8IVH2 680 aaPredicted RBP14.87□□□□□ -0.03
HIF3A-204ENST00000300862 LOC102724428A0A0B4J2F2 783 aa14.87□□□□□ -0.03
HIF3A-204ENST00000300862 NEMFO60524 1076 aa14.87□□□□□ -0.03
HIF3A-204ENST00000300862 IGSF3O75054 1194 aa14.87□□□□□ -0.03
HIF3A-204ENST00000300862 PPP6R2O75170 966 aa14.87□□□□□ -0.03
HIF3A-204ENST00000300862 FMNL1O95466 1100 aaPredicted RBP14.87□□□□□ -0.03
HIF3A-204ENST00000300862 CYP7A1P22680 504 aa14.87□□□□□ -0.03
HIF3A-204ENST00000300862 GYG1P46976 350 aa14.87□□□□□ -0.03
HIF3A-204ENST00000300862 SIK1P57059 783 aa14.87□□□□□ -0.03
HIF3A-204ENST00000300862 NR5A1Q13285 461 aa14.87□□□□□ -0.03
HIF3A-204ENST00000300862 WTAPQ15007 396 aa14.87□□□□□ -0.03
HIF3A-204ENST00000300862 PTPN14Q15678 1187 aa14.87□□□□□ -0.03
HIF3A-204ENST00000300862 RTN1Q16799 776 aa14.87□□□□□ -0.03
HIF3A-204ENST00000300862 CCDC152Q4G0S7 254 aa14.87□□□□□ -0.03
HIF3A-204ENST00000300862 HSP90AA4PQ58FG1 418 aa14.87□□□□□ -0.03
HIF3A-204ENST00000300862 ARMCX5Q6P1M9 558 aa14.87□□□□□ -0.03
HIF3A-204ENST00000300862 SMIM5Q71RC9 77 aa14.87□□□□□ -0.03
HIF3A-204ENST00000300862 DIS3L2Q8IYB7 885 aaKnown RBP14.87□□□□□ -0.03
HIF3A-204ENST00000300862 JMYQ8N9B5 988 aa14.87□□□□□ -0.03
HIF3A-204ENST00000300862 CCDC112Q8NEF3 446 aa14.87□□□□□ -0.03
HIF3A-204ENST00000300862 HSD3B7Q9H2F3 369 aa14.87□□□□□ -0.03
HIF3A-204ENST00000300862 TOB1P50616 345 aaPredicted RBP14.86□□□□□ -0.03
HIF3A-204ENST00000300862 KCNQ4P56696 695 aa14.86□□□□□ -0.03
HIF3A-204ENST00000300862 METTL16Q86W50 562 aaKnown RBP14.86□□□□□ -0.03
HIF3A-204ENST00000300862 CCAR2Q8N163 923 aaKnown RBP14.86□□□□□ -0.03
HIF3A-204ENST00000300862 BPIFA3Q9BQP9 254 aa14.86□□□□□ -0.03
HIF3A-204ENST00000300862 NACAP1Q9BZK3 213 aa14.86□□□□□ -0.03
HIF3A-204ENST00000300862 KRT23Q9C075 422 aa14.86□□□□□ -0.03
HIF3A-204ENST00000300862 CNNM2Q9H8M5 875 aa14.86□□□□□ -0.03
HIF3A-204ENST00000300862 KCNH3Q9ULD8 1083 aa14.86□□□□□ -0.03
HIF3A-204ENST00000300862 hCG_1642624A0A1W2PR95 340 aa14.86□□□□□ -0.03
HIF3A-204ENST00000300862 IFNAR1P17181 557 aa14.86□□□□□ -0.03
HIF3A-204ENST00000300862 FANCCQ00597 558 aa14.86□□□□□ -0.03
HIF3A-204ENST00000300862 RESP18Q5W5W9 173 aa14.86□□□□□ -0.03
HIF3A-204ENST00000300862 NOSTRINQ8IVI9 506 aa14.86□□□□□ -0.03
HIF3A-204ENST00000300862 DPF2Q92785 391 aa14.86□□□□□ -0.03
HIF3A-204ENST00000300862 CYP2D7A0A087X1C5 515 aa14.85□□□□□ -0.03
HIF3A-204ENST00000300862 NTSR2O95665 410 aa14.85□□□□□ -0.03
HIF3A-204ENST00000300862 DDB1Q16531 1140 aa14.85□□□□□ -0.03
HIF3A-204ENST00000300862 C3orf67Q6ZVT6 689 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms