RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 NIP7Q9Y221 180 aaKnown RBP eCLIP14.38□□□□□ -0.11
CLPX-201ENST00000300107 ATP6V0A2Q9Y487 856 aa14.38□□□□□ -0.11
CLPX-201ENST00000300107 ABCC4O15439 1325 aa14.38□□□□□ -0.11
CLPX-201ENST00000300107 RAPGEF1Q13905 1077 aa14.38□□□□□ -0.11
CLPX-201ENST00000300107 RUFY4Q6ZNE9 571 aa14.38□□□□□ -0.11
CLPX-201ENST00000300107 GSTA5Q7RTV2 222 aa14.38□□□□□ -0.11
CLPX-201ENST00000300107 LRRC8AQ8IWT6 810 aa14.38□□□□□ -0.11
CLPX-201ENST00000300107 APPBP2Q92624 585 aa14.38□□□□□ -0.11
CLPX-201ENST00000300107 CABS1Q96KC9 395 aa14.38□□□□□ -0.11
CLPX-201ENST00000300107 ZKSCAN3Q9BRR0 538 aa14.38□□□□□ -0.11
CLPX-201ENST00000300107 RABEP2Q9H5N1 569 aa14.38□□□□□ -0.11
CLPX-201ENST00000300107 TNNI2P48788 182 aa14.37□□□□□ -0.11
CLPX-201ENST00000300107 PLCB3Q01970 1234 aa14.37□□□□□ -0.11
CLPX-201ENST00000300107 POSTNQ15063 836 aa14.37□□□□□ -0.11
CLPX-201ENST00000300107 KRT40Q6A162 431 aa14.37□□□□□ -0.11
CLPX-201ENST00000300107 SND1Q7KZF4 910 aaKnown RBP eCLIP14.37□□□□□ -0.11
CLPX-201ENST00000300107 HELBQ8NG08 1087 aaPredicted RBP14.37□□□□□ -0.11
CLPX-201ENST00000300107 SLF1Q9BQI6 1058 aa14.37□□□□□ -0.11
CLPX-201ENST00000300107 FERMT1Q9BQL6 677 aa14.37□□□□□ -0.11
CLPX-201ENST00000300107 TMEM110-MUSTN1A8MSY1 372 aa14.37□□□□□ -0.11
CLPX-201ENST00000300107 TTC6Q86TZ1 520 aa14.37□□□□□ -0.11
CLPX-201ENST00000300107 KIAA1524Q8TCG1 905 aa14.37□□□□□ -0.11
CLPX-201ENST00000300107 IL2RBP14784 551 aa14.37□□□□□ -0.11
CLPX-201ENST00000300107 MAGEA1P43355 309 aa14.37□□□□□ -0.11
CLPX-201ENST00000300107 PDE4DQ08499 809 aa14.37□□□□□ -0.11
CLPX-201ENST00000300107 TTLL12Q14166 644 aaPredicted RBP14.37□□□□□ -0.11
CLPX-201ENST00000300107 SV2BQ7L1I2 683 aa14.37□□□□□ -0.11
CLPX-201ENST00000300107 RRP36Q96EU6 259 aaKnown RBP14.37□□□□□ -0.11
CLPX-201ENST00000300107 CHAMP1Q96JM3 812 aa14.37□□□□□ -0.11
CLPX-201ENST00000300107 NKIRAS1Q9NYS0 192 aa14.37□□□□□ -0.11
CLPX-201ENST00000300107 PYCARDQ9ULZ3 195 aa14.37□□□□□ -0.11
CLPX-201ENST00000300107 IBTKQ9P2D0 1353 aaPredicted RBP14.37□□□□□ -0.11
CLPX-201ENST00000300107 EFCAB8A8MWE9 144 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 KLHDC4Q8TBB5 520 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 RPGRIP1Q96KN7 1286 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 SETDB2Q96T68 719 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 NAP1L3Q99457 506 aaPredicted RBP14.36□□□□□ -0.11
CLPX-201ENST00000300107 MBD4O95243 580 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 ALDH3A1P30838 453 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 VWA3BQ502W6 1294 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 FMNL3Q8IVF7 1028 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 PPFIBP2Q8ND30 876 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 NOX5Q96PH1 765 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 SWAP70Q9UH65 585 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 RPL13P26373 211 aaKnown RBP14.36□□□□□ -0.11
CLPX-201ENST00000300107 PPP1R7Q15435 360 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 MYSM1Q5VVJ2 828 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 TSNARE1Q96NA8 513 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 ORAI2Q96SN7 254 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 MCM9Q9NXL9 1143 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 TAB2Q9NYJ8 693 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 VGLL3A8MV65 326 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 F8W031 263 aaPredicted RBP14.36□□□□□ -0.11
CLPX-201ENST00000300107 TRMT2AQ8IZ69 625 aaKnown RBP14.36□□□□□ -0.11
CLPX-201ENST00000300107 SIRT1Q96EB6 747 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 BICD1Q96G01 975 aa14.36□□□□□ -0.11
CLPX-201ENST00000300107 ACTN4O43707 911 aaKnown RBP14.35□□□□□ -0.11
CLPX-201ENST00000300107 PAK2Q13177 524 aa14.35□□□□□ -0.11
CLPX-201ENST00000300107 INTS8Q75QN2 995 aaKnown RBP14.35□□□□□ -0.11
CLPX-201ENST00000300107 NLRP3Q96P20 1036 aa14.35□□□□□ -0.11
CLPX-201ENST00000300107 ITSN2Q9NZM3 1697 aa14.35□□□□□ -0.11
CLPX-201ENST00000300107 CCDC160A6NGH7 325 aa14.35□□□□□ -0.11
CLPX-201ENST00000300107 GIGYF1O75420 1035 aaPredicted RBP14.35□□□□□ -0.11
CLPX-201ENST00000300107 SREK1Q8WXA9 508 aaKnown RBP14.35□□□□□ -0.11
CLPX-201ENST00000300107 USP28Q96RU2 1077 aa14.35□□□□□ -0.11
CLPX-201ENST00000300107 USP19O94966 1318 aa14.35□□□□□ -0.11
CLPX-201ENST00000300107 EEF2P13639 858 aaKnown RBP14.35□□□□□ -0.11
CLPX-201ENST00000300107 ADKP55263 362 aaKnown RBP14.35□□□□□ -0.11
CLPX-201ENST00000300107 RNASE9P60153 205 aaKnown RBP14.35□□□□□ -0.11
CLPX-201ENST00000300107 LONRF3Q496Y0 759 aa14.35□□□□□ -0.11
CLPX-201ENST00000300107 TRMT44Q8IYL2 757 aaKnown RBP14.35□□□□□ -0.11
CLPX-201ENST00000300107 GPAA1O43292 621 aa14.35□□□□□ -0.11
CLPX-201ENST00000300107 CCDC65Q8IXS2 484 aa14.35□□□□□ -0.11
CLPX-201ENST00000300107 CCDC51Q96ER9 411 aa14.35□□□□□ -0.11
CLPX-201ENST00000300107 SPATA31E1Q6ZUB1 1445 aa14.34□□□□□ -0.11
CLPX-201ENST00000300107 RNMTO43148 476 aaKnown RBP14.34□□□□□ -0.11
CLPX-201ENST00000300107 FERP16591 822 aa14.34□□□□□ -0.11
CLPX-201ENST00000300107 DMTNQ08495 405 aa14.34□□□□□ -0.11
CLPX-201ENST00000300107 CNNM4Q6P4Q7 775 aa14.34□□□□□ -0.11
CLPX-201ENST00000300107 CCDC50Q8IVM0 306 aa14.34□□□□□ -0.11
CLPX-201ENST00000300107 TRIM7Q9C029 511 aa14.34□□□□□ -0.11
CLPX-201ENST00000300107 V9GY48 417 aaPredicted RBP14.34□□□□□ -0.11
CLPX-201ENST00000300107 ABCC1P33527 1531 aa14.34□□□□□ -0.11
CLPX-201ENST00000300107 FAM13AO94988 1023 aa14.34□□□□□ -0.11
CLPX-201ENST00000300107 GJC1P36383 396 aa14.34□□□□□ -0.11
CLPX-201ENST00000300107 WHAMMP3Q1A5X7 153 aa14.34□□□□□ -0.11
CLPX-201ENST00000300107 LETM2Q2VYF4 491 aa14.34□□□□□ -0.11
CLPX-201ENST00000300107 SLC9C1Q4G0N8 1177 aa14.34□□□□□ -0.11
CLPX-201ENST00000300107 SAR1BQ9Y6B6 198 aa14.34□□□□□ -0.11
CLPX-201ENST00000300107 SYNCQ9H7C4 482 aa14.34□□□□□ -0.11
CLPX-201ENST00000300107 ZSWIM6Q9HCJ5 1215 aa14.34□□□□□ -0.11
CLPX-201ENST00000300107 PSDA5PKW4 1024 aaPredicted RBP14.33□□□□□ -0.11
CLPX-201ENST00000300107 IRS4O14654 1257 aaPredicted RBP14.33□□□□□ -0.11
CLPX-201ENST00000300107 ATP5DP30049 168 aa14.33□□□□□ -0.11
CLPX-201ENST00000300107 SSH3Q8TE77 659 aa14.33□□□□□ -0.11
CLPX-201ENST00000300107 METTL22Q9BUU2 404 aaPredicted RBP14.33□□□□□ -0.11
CLPX-201ENST00000300107 CLNS1AP54105 237 aaKnown RBP14.33□□□□□ -0.12
CLPX-201ENST00000300107 TTC38Q5R3I4 469 aa14.33□□□□□ -0.12
CLPX-201ENST00000300107 DZIP3Q86Y13 1208 aaKnown RBP14.33□□□□□ -0.12
CLPX-201ENST00000300107 SEC62Q99442 399 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms