RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 GBP3Q9H0R5 595 aa16.78■□□□□ 0.28
CDH23-202ENST00000299366 ZNF287Q9HBT7 754 aa16.78■□□□□ 0.28
CDH23-202ENST00000299366 CDC42BPBQ9Y5S2 1711 aa16.78■□□□□ 0.28
CDH23-202ENST00000299366 PLS1Q14651 629 aa16.78■□□□□ 0.28
CDH23-202ENST00000299366 SMYD4Q8IYR2 804 aaPredicted RBP16.78■□□□□ 0.28
CDH23-202ENST00000299366 CTNNBL1Q8WYA6 563 aaPredicted RBP16.78■□□□□ 0.28
CDH23-202ENST00000299366 TSG101Q99816 390 aa16.78■□□□□ 0.28
CDH23-202ENST00000299366 ARHGEF10O15013 1369 aa16.77■□□□□ 0.28
CDH23-202ENST00000299366 PTCH1Q13635 1447 aa16.77■□□□□ 0.28
CDH23-202ENST00000299366 CTAGE9A4FU28 777 aa16.77■□□□□ 0.28
CDH23-202ENST00000299366 RDXP35241 583 aaKnown RBP16.77■□□□□ 0.28
CDH23-202ENST00000299366 IPO4Q8TEX9 1081 aaKnown RBP16.77■□□□□ 0.28
CDH23-202ENST00000299366 SLF1Q9BQI6 1058 aa16.77■□□□□ 0.28
CDH23-202ENST00000299366 AXIN2Q9Y2T1 843 aa16.77■□□□□ 0.28
CDH23-202ENST00000299366 SAMM50Q9Y512 469 aa16.77■□□□□ 0.28
CDH23-202ENST00000299366 FAM135BQ49AJ0 1406 aa16.77■□□□□ 0.27
CDH23-202ENST00000299366 UNC13BO14795 1591 aa16.77■□□□□ 0.27
CDH23-202ENST00000299366 PLXNC1O60486 1568 aa16.77■□□□□ 0.27
CDH23-202ENST00000299366 ANKRD62A6NC57 917 aa16.77■□□□□ 0.27
CDH23-202ENST00000299366 FAM182BQ5T319 152 aa16.77■□□□□ 0.27
CDH23-202ENST00000299366 OSBP2Q969R2 916 aa16.77■□□□□ 0.27
CDH23-202ENST00000299366 CCDC42Q96M95 316 aa16.77■□□□□ 0.27
CDH23-202ENST00000299366 RAB34Q9BZG1 259 aa16.77■□□□□ 0.27
CDH23-202ENST00000299366 KCNF1Q9H3M0 494 aa16.77■□□□□ 0.27
CDH23-202ENST00000299366 AKNAD1Q5T1N1 836 aa16.76■□□□□ 0.27
CDH23-202ENST00000299366 FEZ1Q99689 392 aa16.76■□□□□ 0.27
CDH23-202ENST00000299366 IQUBQ8NA54 791 aa16.76■□□□□ 0.27
CDH23-202ENST00000299366 TAF6LQ9Y6J9 622 aa16.76■□□□□ 0.27
CDH23-202ENST00000299366 PTPN12Q05209 780 aaKnown RBP16.76■□□□□ 0.27
CDH23-202ENST00000299366 IFFO1Q0D2I5 559 aa16.76■□□□□ 0.27
CDH23-202ENST00000299366 CCDC122Q5T0U0 273 aa16.76■□□□□ 0.27
CDH23-202ENST00000299366 IQCEQ6IPM2 695 aa16.76■□□□□ 0.27
CDH23-202ENST00000299366 HAUS7Q99871 368 aa16.76■□□□□ 0.27
CDH23-202ENST00000299366 TBC1D7Q9P0N9 293 aa16.76■□□□□ 0.27
CDH23-202ENST00000299366 CALCOCO1Q9P1Z2 691 aa16.76■□□□□ 0.27
CDH23-202ENST00000299366 LUC7L2Q9Y383 392 aaKnown RBP16.76■□□□□ 0.27
CDH23-202ENST00000299366 USP17L12C9JPN9 530 aa16.75■□□□□ 0.27
CDH23-202ENST00000299366 USP17L21D6R901 530 aa16.75■□□□□ 0.27
CDH23-202ENST00000299366 PRKAB2O43741 272 aa16.75■□□□□ 0.27
CDH23-202ENST00000299366 KRT9P35527 623 aa16.75■□□□□ 0.27
CDH23-202ENST00000299366 DTHD1Q6ZMT9 781 aa16.75■□□□□ 0.27
CDH23-202ENST00000299366 C10orf67Q8IYJ2 551 aa16.75■□□□□ 0.27
CDH23-202ENST00000299366 LLPHQ9BRT6 129 aaKnown RBP16.75■□□□□ 0.27
CDH23-202ENST00000299366 PCDHA5Q9Y5H7 936 aa16.75■□□□□ 0.27
CDH23-202ENST00000299366 AKR1B15C9JRZ8 316 aaPredicted RBP16.75■□□□□ 0.27
CDH23-202ENST00000299366 WDHD1O75717 1129 aaPredicted RBP16.75■□□□□ 0.27
CDH23-202ENST00000299366 IGKV5-2P06315 115 aa16.75■□□□□ 0.27
CDH23-202ENST00000299366 DYMQ7RTS9 669 aa16.75■□□□□ 0.27
CDH23-202ENST00000299366 NSUN7Q8NE18 718 aaKnown RBP16.75■□□□□ 0.27
CDH23-202ENST00000299366 IFT81Q8WYA0 676 aa16.75■□□□□ 0.27
CDH23-202ENST00000299366 PUS7LQ9H0K6 701 aaKnown RBP16.75■□□□□ 0.27
CDH23-202ENST00000299366 GPCPD1Q9NPB8 672 aa16.75■□□□□ 0.27
CDH23-202ENST00000299366 ZEB2O60315 1214 aa16.75■□□□□ 0.27
CDH23-202ENST00000299366 PDE6AP16499 860 aa16.75■□□□□ 0.27
CDH23-202ENST00000299366 NECTIN1Q15223 517 aa16.75■□□□□ 0.27
CDH23-202ENST00000299366 SPATA5Q8NB90 893 aa16.75■□□□□ 0.27
CDH23-202ENST00000299366 GOLGA6L9A6NEM1 432 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 ERLIN2O94905 339 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 ATP1A3P13637 1013 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 TCIRG1Q13488 830 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 PUM3Q15397 648 aaKnown RBP16.74■□□□□ 0.27
CDH23-202ENST00000299366 MAST3O60307 1309 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 PCDH11XQ9BZA7 1347 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 PCDH11YQ9BZA8 1340 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 ECM2O94769 699 aaPredicted RBP16.74■□□□□ 0.27
CDH23-202ENST00000299366 TXKP42681 527 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 NR5A1Q13285 461 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 MAP9Q49MG5 647 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 LRRC8AQ8IWT6 810 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 GOLGA1Q92805 767 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 PKD2L1Q9P0L9 805 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 SMIM23A6NLE4 172 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 NCBP1Q09161 790 aaKnown RBP16.74■□□□□ 0.27
CDH23-202ENST00000299366 TBC1D8BQ0IIM8 1120 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 POSTNQ15063 836 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 RILPL1Q5EBL4 403 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 ADALQ6DHV7 355 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 FBXO18Q8NFZ0 1043 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 ERO1AQ96HE7 468 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 TIGD1Q96MW7 591 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 KDRP35968 1356 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 CHD1O14646 1710 aa16.74■□□□□ 0.27
CDH23-202ENST00000299366 M0R2C6 588 aa16.73■□□□□ 0.27
CDH23-202ENST00000299366 BABAM1Q9NWV8 329 aa16.73■□□□□ 0.27
CDH23-202ENST00000299366 GNPATO15228 680 aa16.73■□□□□ 0.27
CDH23-202ENST00000299366 PFKFB2O60825 505 aa16.73■□□□□ 0.27
CDH23-202ENST00000299366 GOLGA8HP0CJ92 632 aa16.73■□□□□ 0.27
CDH23-202ENST00000299366 CALM1P0DP23 149 aa16.73■□□□□ 0.27
CDH23-202ENST00000299366 CALM2P0DP24 149 aa16.73■□□□□ 0.27
CDH23-202ENST00000299366 CALM3P0DP25 149 aa16.73■□□□□ 0.27
CDH23-202ENST00000299366 ARHGEF25Q86VW2 580 aa16.73■□□□□ 0.27
CDH23-202ENST00000299366 SEC31BQ9NQW1 1179 aa16.73■□□□□ 0.27
CDH23-202ENST00000299366 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.73■□□□□ 0.27
CDH23-202ENST00000299366 CYP2D7A0A087X1C5 515 aa16.73■□□□□ 0.27
CDH23-202ENST00000299366 NLRP12P59046 1061 aa16.73■□□□□ 0.27
CDH23-202ENST00000299366 KIF5AQ12840 1032 aa16.73■□□□□ 0.27
CDH23-202ENST00000299366 COPRSQ9NQ92 184 aa16.73■□□□□ 0.27
CDH23-202ENST00000299366 LAMC1P11047 1609 aa16.73■□□□□ 0.27
CDH23-202ENST00000299366 DYDC1Q8WWB3 177 aa16.72■□□□□ 0.27
CDH23-202ENST00000299366 ABCA6Q8N139 1617 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms