RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 TRIM29Q14134 588 aa28.14■■■□□ 2.09
SPTSSA-201ENST00000298130 IFNL3Q8IZI9 196 aa28.14■■■□□ 2.09
SPTSSA-201ENST00000298130 PDILTQ8N807 584 aa28.14■■■□□ 2.09
SPTSSA-201ENST00000298130 CNNM3Q8NE01 707 aa28.14■■■□□ 2.09
SPTSSA-201ENST00000298130 IMPACTQ9P2X3 320 aa28.14■■■□□ 2.09
SPTSSA-201ENST00000298130 SLC12A7Q9Y666 1083 aa28.14■■■□□ 2.09
SPTSSA-201ENST00000298130 CPLX2Q6PUV4 134 aaKnown RBP28.13■■■□□ 2.09
SPTSSA-201ENST00000298130 SEC31BQ9NQW1 1179 aa28.13■■■□□ 2.09
SPTSSA-201ENST00000298130 HPSEQ9Y251 543 aa28.13■■■□□ 2.09
SPTSSA-201ENST00000298130 UBE3CQ15386 1083 aa28.13■■■□□ 2.09
SPTSSA-201ENST00000298130 ERCC6LQ2NKX8 1250 aa28.13■■■□□ 2.09
SPTSSA-201ENST00000298130 UBR2Q8IWV8 1755 aa28.13■■■□□ 2.09
SPTSSA-201ENST00000298130 BMP6P22004 513 aa28.12■■■□□ 2.09
SPTSSA-201ENST00000298130 RASGRF1Q13972 1273 aa28.12■■■□□ 2.09
SPTSSA-201ENST00000298130 CDKL5O76039 1030 aa28.12■■■□□ 2.09
SPTSSA-201ENST00000298130 KCNH3Q9ULD8 1083 aa28.12■■■□□ 2.09
SPTSSA-201ENST00000298130 TTF1Q15361 905 aaPredicted RBP28.11■■■□□ 2.09
SPTSSA-201ENST00000298130 CCDC150Q8NCX0 1101 aa28.11■■■□□ 2.09
SPTSSA-201ENST00000298130 SPEF2Q9C093 1822 aa28.11■■■□□ 2.09
SPTSSA-201ENST00000298130 SLU7O95391 586 aaKnown RBP28.11■■■□□ 2.09
SPTSSA-201ENST00000298130 NR5A1Q13285 461 aa28.11■■■□□ 2.09
SPTSSA-201ENST00000298130 NUP133Q8WUM0 1156 aa28.11■■■□□ 2.09
SPTSSA-201ENST00000298130 UTP14AQ9BVJ6 771 aaKnown RBP28.11■■■□□ 2.09
SPTSSA-201ENST00000298130 OGFRQ9NZT2 677 aa28.11■■■□□ 2.09
SPTSSA-201ENST00000298130 TUBE1Q9UJT0 475 aa28.11■■■□□ 2.09
SPTSSA-201ENST00000298130 SYCP1Q15431 976 aa28.11■■■□□ 2.09
SPTSSA-201ENST00000298130 TRMT44Q8IYL2 757 aaKnown RBP28.11■■■□□ 2.09
SPTSSA-201ENST00000298130 SPATA5Q8NB90 893 aa28.11■■■□□ 2.09
SPTSSA-201ENST00000298130 hCG_1642624A0A1W2PR95 340 aa28.1■■■□□ 2.09
SPTSSA-201ENST00000298130 RESP18Q5W5W9 173 aa28.1■■■□□ 2.09
SPTSSA-201ENST00000298130 DNAI1Q9UI46 699 aa28.1■■■□□ 2.09
SPTSSA-201ENST00000298130 MYL5Q02045 173 aa28.1■■■□□ 2.09
SPTSSA-201ENST00000298130 SSRP1Q08945 709 aaKnown RBP28.1■■■□□ 2.09
SPTSSA-201ENST00000298130 DDX41Q9UJV9 622 aaKnown RBP28.1■■■□□ 2.09
SPTSSA-201ENST00000298130 AKAP11Q9UKA4 1901 aa28.09■■■□□ 2.09
SPTSSA-201ENST00000298130 PRR29P0C7W0 189 aa28.09■■■□□ 2.09
SPTSSA-201ENST00000298130 LCORLQ8N3X6 602 aa28.09■■■□□ 2.09
SPTSSA-201ENST00000298130 PPP6R2O75170 966 aa28.09■■■□□ 2.09
SPTSSA-201ENST00000298130 TOB1P50616 345 aaPredicted RBP28.09■■■□□ 2.09
SPTSSA-201ENST00000298130 BCAMP50895 628 aa28.09■■■□□ 2.09
SPTSSA-201ENST00000298130 FEZ1Q99689 392 aa28.09■■■□□ 2.09
SPTSSA-201ENST00000298130 CYP19A1P11511 503 aaPredicted RBP28.08■■■□□ 2.09
SPTSSA-201ENST00000298130 KRBA2Q6ZNG9 492 aa28.08■■■□□ 2.09
SPTSSA-201ENST00000298130 DIS3L2Q8IYB7 885 aaKnown RBP28.08■■■□□ 2.09
SPTSSA-201ENST00000298130 JMYQ8N9B5 988 aa28.08■■■□□ 2.09
SPTSSA-201ENST00000298130 PARP4Q9UKK3 1724 aaKnown RBP28.08■■■□□ 2.09
SPTSSA-201ENST00000298130 WDR19Q8NEZ3 1342 aa28.08■■■□□ 2.09
SPTSSA-201ENST00000298130 USP49Q70CQ1 688 aa28.08■■■□□ 2.09
SPTSSA-201ENST00000298130 DZIP3Q86Y13 1208 aaKnown RBP28.08■■■□□ 2.09
SPTSSA-201ENST00000298130 ERO1AQ96HE7 468 aa28.08■■■□□ 2.09
SPTSSA-201ENST00000298130 TMEM87BQ96K49 555 aa28.08■■■□□ 2.09
SPTSSA-201ENST00000298130 ST7Q9NRC1 585 aa28.08■■■□□ 2.09
SPTSSA-201ENST00000298130 TDO2P48775 406 aa28.07■■■□□ 2.08
SPTSSA-201ENST00000298130 OXER1Q8TDS5 423 aa28.07■■■□□ 2.08
SPTSSA-201ENST00000298130 C4AP0C0L4 1744 aa28.07■■■□□ 2.08
SPTSSA-201ENST00000298130 C4BP0C0L5 1744 aa28.07■■■□□ 2.08
SPTSSA-201ENST00000298130 CDHR2Q9BYE9 1310 aa28.07■■■□□ 2.08
SPTSSA-201ENST00000298130 PATL2C9JE40 543 aaKnown RBP28.07■■■□□ 2.08
SPTSSA-201ENST00000298130 FANCGO15287 622 aa28.07■■■□□ 2.08
SPTSSA-201ENST00000298130 PDE8AO60658 829 aa28.07■■■□□ 2.08
SPTSSA-201ENST00000298130 BTG4Q9NY30 223 aa28.07■■■□□ 2.08
SPTSSA-201ENST00000298130 SLAIN2Q9P270 581 aa28.07■■■□□ 2.08
SPTSSA-201ENST00000298130 WTIPA6NIX2 430 aaPredicted RBP28.06■■■□□ 2.08
SPTSSA-201ENST00000298130 GSG1L2A8MUP6 293 aa28.06■■■□□ 2.08
SPTSSA-201ENST00000298130 POLR2DO15514 142 aaKnown RBP28.06■■■□□ 2.08
SPTSSA-201ENST00000298130 PUM3Q15397 648 aaKnown RBP28.06■■■□□ 2.08
SPTSSA-201ENST00000298130 OLFM4Q6UX06 510 aa28.06■■■□□ 2.08
SPTSSA-201ENST00000298130 PCDHB6Q9Y5E3 794 aa28.06■■■□□ 2.08
SPTSSA-201ENST00000298130 DCCP43146 1447 aa28.06■■■□□ 2.08
SPTSSA-201ENST00000298130 IKBKBO14920 756 aa28.06■■■□□ 2.08
SPTSSA-201ENST00000298130 ZNF397Q8NF99 534 aaPredicted RBP28.06■■■□□ 2.08
SPTSSA-201ENST00000298130 TEX13AQ9BXU3 409 aaPredicted RBP28.06■■■□□ 2.08
SPTSSA-201ENST00000298130 INTS13Q9NVM9 706 aa28.06■■■□□ 2.08
SPTSSA-201ENST00000298130 ARID4AP29374 1257 aaPredicted RBP28.05■■■□□ 2.08
SPTSSA-201ENST00000298130 MFSD6Q6ZSS7 791 aa28.05■■■□□ 2.08
SPTSSA-201ENST00000298130 NOSTRINQ8IVI9 506 aa28.05■■■□□ 2.08
SPTSSA-201ENST00000298130 LPIN2Q92539 896 aa28.05■■■□□ 2.08
SPTSSA-201ENST00000298130 TIGD1Q96MW7 591 aa28.05■■■□□ 2.08
SPTSSA-201ENST00000298130 SERTAD1Q9UHV2 236 aa28.05■■■□□ 2.08
SPTSSA-201ENST00000298130 SLC4A4Q9Y6R1 1079 aa28.05■■■□□ 2.08
SPTSSA-201ENST00000298130 FMR1Q06787 632 aaKnown RBP eCLIP28.05■■■□□ 2.08
SPTSSA-201ENST00000298130 FAM205CA6NFA0 338 aa28.05■■■□□ 2.08
SPTSSA-201ENST00000298130 TOP1P11387 765 aaKnown RBP28.05■■■□□ 2.08
SPTSSA-201ENST00000298130 AKNAD1Q5T1N1 836 aa28.04■■■□□ 2.08
SPTSSA-201ENST00000298130 SGMS1Q86VZ5 419 aa28.04■■■□□ 2.08
SPTSSA-201ENST00000298130 KRI1Q8N9T8 703 aaKnown RBP28.04■■■□□ 2.08
SPTSSA-201ENST00000298130 SDR42E1Q8WUS8 393 aa28.04■■■□□ 2.08
SPTSSA-201ENST00000298130 ABCC12Q96J65 1359 aa28.04■■■□□ 2.08
SPTSSA-201ENST00000298130 MINDY4BA8MYZ0 360 aa28.04■■■□□ 2.08
SPTSSA-201ENST00000298130 MAP3K12Q12852 859 aa28.04■■■□□ 2.08
SPTSSA-201ENST00000298130 CUTAO60888 179 aa28.03■■■□□ 2.08
SPTSSA-201ENST00000298130 CASP1P29466 404 aa28.03■■■□□ 2.08
SPTSSA-201ENST00000298130 MPHOSPH8Q99549 860 aa28.03■■■□□ 2.08
SPTSSA-201ENST00000298130 TOGARAM1Q9Y4F4 1720 aa28.03■■■□□ 2.08
SPTSSA-201ENST00000298130 PLEKHG2Q9H7P9 1386 aa28.03■■■□□ 2.08
SPTSSA-201ENST00000298130 ADKP55263 362 aaKnown RBP28.03■■■□□ 2.08
SPTSSA-201ENST00000298130 SUSD4Q5VX71 490 aa28.03■■■□□ 2.08
SPTSSA-201ENST00000298130 EPC1Q9H2F5 836 aa28.03■■■□□ 2.08
SPTSSA-201ENST00000298130 ZNF446Q9NWS9 450 aa28.03■■■□□ 2.08
SPTSSA-201ENST00000298130 FMNL1O95466 1100 aaPredicted RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms