RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 KIF16BQ96L93 1317 aa22.36■■□□□ 1.17
LRPAP1-201ENST00000296325 PTPRAP18433 802 aa22.36■■□□□ 1.17
LRPAP1-201ENST00000296325 DDX10Q13206 875 aaKnown RBP22.36■■□□□ 1.17
LRPAP1-201ENST00000296325 SCYL3Q8IZE3 742 aa22.36■■□□□ 1.17
LRPAP1-201ENST00000296325 SUCLG2Q96I99 432 aa22.36■■□□□ 1.17
LRPAP1-201ENST00000296325 NBPF3Q9H094 633 aa22.36■■□□□ 1.17
LRPAP1-201ENST00000296325 ZHX2Q9Y6X8 837 aa22.36■■□□□ 1.17
LRPAP1-201ENST00000296325 PDE8BO95263 885 aa22.35■■□□□ 1.17
LRPAP1-201ENST00000296325 SYN1P17600 705 aa22.35■■□□□ 1.17
LRPAP1-201ENST00000296325 LRRC24Q50LG9 513 aa22.35■■□□□ 1.17
LRPAP1-201ENST00000296325 PRKRIP1Q9H875 184 aaPredicted RBP22.35■■□□□ 1.17
LRPAP1-201ENST00000296325 DNAH12Q6ZR08 3092 aa22.35■■□□□ 1.17
LRPAP1-201ENST00000296325 COL2A1P02458 1487 aaPredicted RBP22.34■■□□□ 1.17
LRPAP1-201ENST00000296325 FANCIQ9NVI1 1328 aa22.34■■□□□ 1.17
LRPAP1-201ENST00000296325 ALDH1L1O75891 902 aa22.34■■□□□ 1.17
LRPAP1-201ENST00000296325 COA7Q96BR5 231 aa22.34■■□□□ 1.17
LRPAP1-201ENST00000296325 C9orf78Q9NZ63 289 aaPredicted RBP22.34■■□□□ 1.17
LRPAP1-201ENST00000296325 DDX60LQ5H9U9 1706 aaKnown RBP22.34■■□□□ 1.17
LRPAP1-201ENST00000296325 HMGCRP04035 888 aa22.33■■□□□ 1.17
LRPAP1-201ENST00000296325 MAP3K10Q02779 954 aa22.33■■□□□ 1.17
LRPAP1-201ENST00000296325 FAM110CQ1W6H9 321 aa22.33■■□□□ 1.17
LRPAP1-201ENST00000296325 RABL6Q3YEC7 729 aaPredicted RBP22.33■■□□□ 1.17
LRPAP1-201ENST00000296325 ZFPM1Q8IX07 1006 aa22.33■■□□□ 1.17
LRPAP1-201ENST00000296325 SMCR8Q8TEV9 937 aaPredicted RBP22.33■■□□□ 1.17
LRPAP1-201ENST00000296325 PHIPQ8WWQ0 1821 aa22.32■■□□□ 1.16
LRPAP1-201ENST00000296325 MUC3AQ02505 3323 aa22.32■■□□□ 1.16
LRPAP1-201ENST00000296325 AK9Q5TCS8 1911 aa22.32■■□□□ 1.16
LRPAP1-201ENST00000296325 POTEB2H3BUK9 544 aa22.32■■□□□ 1.16
LRPAP1-201ENST00000296325 FGFR2P21802 821 aa22.32■■□□□ 1.16
LRPAP1-201ENST00000296325 DIXDC1Q155Q3 683 aa22.32■■□□□ 1.16
LRPAP1-201ENST00000296325 METTL24Q5JXM2 366 aa22.32■■□□□ 1.16
LRPAP1-201ENST00000296325 GADL1Q6ZQY3 521 aa22.32■■□□□ 1.16
LRPAP1-201ENST00000296325 ANKRD13CQ8N6S4 541 aa22.32■■□□□ 1.16
LRPAP1-201ENST00000296325 GUCD1Q96NT3 240 aa22.32■■□□□ 1.16
LRPAP1-201ENST00000296325 UBE2OQ9C0C9 1292 aaKnown RBP22.32■■□□□ 1.16
LRPAP1-201ENST00000296325 OGDHLQ9ULD0 1010 aa22.32■■□□□ 1.16
LRPAP1-201ENST00000296325 UTYO14607 1347 aa22.31■■□□□ 1.16
LRPAP1-201ENST00000296325 RPTORQ8N122 1335 aa22.31■■□□□ 1.16
LRPAP1-201ENST00000296325 FAM109BQ6ICB4 259 aaPredicted RBP22.31■■□□□ 1.16
LRPAP1-201ENST00000296325 WDR66Q8TBY9 1149 aa22.31■■□□□ 1.16
LRPAP1-201ENST00000296325 C11orf49Q9H6J7 331 aa22.31■■□□□ 1.16
LRPAP1-201ENST00000296325 TAOK2Q9UL54 1235 aa22.31■■□□□ 1.16
LRPAP1-201ENST00000296325 AGTPBP1Q9UPW5 1226 aa22.31■■□□□ 1.16
LRPAP1-201ENST00000296325 PFASO15067 1338 aa22.31■■□□□ 1.16
LRPAP1-201ENST00000296325 RFX7Q2KHR2 1363 aa22.3■■□□□ 1.16
LRPAP1-201ENST00000296325 PICK1Q9NRD5 415 aa22.3■■□□□ 1.16
LRPAP1-201ENST00000296325 GJD2Q9UKL4 321 aa22.3■■□□□ 1.16
LRPAP1-201ENST00000296325 DOCK2Q92608 1830 aa22.29■■□□□ 1.16
LRPAP1-201ENST00000296325 NBPF7P0C2Y1 421 aaPredicted RBP22.29■■□□□ 1.16
LRPAP1-201ENST00000296325 TRIM32Q13049 653 aa22.29■■□□□ 1.16
LRPAP1-201ENST00000296325 HMX1Q9NP08 348 aaPredicted RBP22.29■■□□□ 1.16
LRPAP1-201ENST00000296325 PRDX5P30044 214 aa22.28■■□□□ 1.16
LRPAP1-201ENST00000296325 NCBP3Q53F19 620 aaKnown RBP22.28■■□□□ 1.16
LRPAP1-201ENST00000296325 MAP3K21Q5TCX8 1036 aa22.28■■□□□ 1.16
LRPAP1-201ENST00000296325 SH3BP5LQ7L8J4 393 aa22.28■■□□□ 1.16
LRPAP1-201ENST00000296325 ANKRD44Q8N8A2 993 aa22.28■■□□□ 1.16
LRPAP1-201ENST00000296325 IDI2Q9BXS1 227 aa22.28■■□□□ 1.16
LRPAP1-201ENST00000296325 BICC1Q9H694 974 aaKnown RBP22.28■■□□□ 1.16
LRPAP1-201ENST00000296325 CDH23Q9H251 3354 aa22.27■■□□□ 1.16
LRPAP1-201ENST00000296325 COL6A1P12109 1028 aa22.27■■□□□ 1.16
LRPAP1-201ENST00000296325 DOCK1Q14185 1865 aa22.27■■□□□ 1.16
LRPAP1-201ENST00000296325 PUM3Q15397 648 aaKnown RBP22.27■■□□□ 1.16
LRPAP1-201ENST00000296325 TREML2Q5T2D2 321 aa22.27■■□□□ 1.16
LRPAP1-201ENST00000296325 SRCIN1Q9C0H9 1055 aa22.27■■□□□ 1.16
LRPAP1-201ENST00000296325 USP40Q9NVE5 1235 aa22.27■■□□□ 1.16
LRPAP1-201ENST00000296325 TRIM75PA6NK02 468 aa22.26■■□□□ 1.15
LRPAP1-201ENST00000296325 CTNND1O60716 968 aaKnown RBP22.26■■□□□ 1.15
LRPAP1-201ENST00000296325 ENTPD3O75355 529 aa22.26■■□□□ 1.15
LRPAP1-201ENST00000296325 IFIT1P09914 478 aaKnown RBP22.26■■□□□ 1.15
LRPAP1-201ENST00000296325 MYH13Q9UKX3 1938 aa22.25■■□□□ 1.15
LRPAP1-201ENST00000296325 PLXNB2O15031 1838 aa22.25■■□□□ 1.15
LRPAP1-201ENST00000296325 SLURP2P0DP57 97 aa22.25■■□□□ 1.15
LRPAP1-201ENST00000296325 RGS3P49796 1198 aa22.25■■□□□ 1.15
LRPAP1-201ENST00000296325 EXOSC9Q06265 439 aaKnown RBP22.25■■□□□ 1.15
LRPAP1-201ENST00000296325 TRIB2Q92519 343 aa22.25■■□□□ 1.15
LRPAP1-201ENST00000296325 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.25■■□□□ 1.15
LRPAP1-201ENST00000296325 PNMA3Q9UL41 463 aa22.25■■□□□ 1.15
LRPAP1-201ENST00000296325 PROCA1Q8NCQ7 364 aaPredicted RBP22.24■■□□□ 1.15
LRPAP1-201ENST00000296325 KLHDC4Q8TBB5 520 aa22.24■■□□□ 1.15
LRPAP1-201ENST00000296325 SPINK5Q9NQ38 1064 aaPredicted RBP22.24■■□□□ 1.15
LRPAP1-201ENST00000296325 LOC285556D6RIA3 1793 aa22.23■■□□□ 1.15
LRPAP1-201ENST00000296325 GCLCP48506 637 aaPredicted RBP22.23■■□□□ 1.15
LRPAP1-201ENST00000296325 CCDC84Q86UT8 332 aaPredicted RBP22.23■■□□□ 1.15
LRPAP1-201ENST00000296325 PRDM6Q9NQX0 595 aa22.23■■□□□ 1.15
LRPAP1-201ENST00000296325 SALL1Q9NSC2 1324 aa22.23■■□□□ 1.15
LRPAP1-201ENST00000296325 DDTLA6NHG4 134 aaPredicted RBP22.22■■□□□ 1.15
LRPAP1-201ENST00000296325 SLC4A10Q6U841 1118 aa22.22■■□□□ 1.15
LRPAP1-201ENST00000296325 LRRFIP2Q9Y608 721 aaKnown RBP22.22■■□□□ 1.15
LRPAP1-201ENST00000296325 GAKO14976 1311 aa22.22■■□□□ 1.15
LRPAP1-201ENST00000296325 LDHBP07195 334 aaKnown RBP22.21■■□□□ 1.15
LRPAP1-201ENST00000296325 LRRC26Q2I0M4 334 aa22.21■■□□□ 1.15
LRPAP1-201ENST00000296325 LPIN2Q92539 896 aa22.21■■□□□ 1.15
LRPAP1-201ENST00000296325 ZEB1P37275 1124 aaPredicted RBP22.2■■□□□ 1.14
LRPAP1-201ENST00000296325 MDM2Q00987 491 aaPredicted RBP22.2■■□□□ 1.14
LRPAP1-201ENST00000296325 DDX4Q9NQI0 724 aaKnown RBP22.2■■□□□ 1.14
LRPAP1-201ENST00000296325 MORF4L1Q9UBU8 362 aa22.2■■□□□ 1.14
LRPAP1-201ENST00000296325 ZBTB22O15209 634 aa22.19■■□□□ 1.14
LRPAP1-201ENST00000296325 PRKAR2AP13861 404 aaKnown RBP22.19■■□□□ 1.14
LRPAP1-201ENST00000296325 SLC5A1P13866 664 aa22.19■■□□□ 1.14
LRPAP1-201ENST00000296325 TBC1D12O60347 775 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms