RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 NAP1L4Q99733 375 aaKnown RBP12.34□□□□□ -0.43
PBRM1-201ENST00000296302 HDAC9Q9UKV0 1011 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 FPGT-TNNI3KV9GXZ4 949 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 VGLL3A8MV65 326 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 CIB2O75838 187 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 TAOK1Q7L7X3 1001 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 SYNCQ9H7C4 482 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 MTMR6Q9Y217 621 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 SAR1BQ9Y6B6 198 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 PZPP20742 1482 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 FAM13AO94988 1023 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 SLC39A6Q13433 755 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 SLC9C1Q4G0N8 1177 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 KRT28Q7Z3Y7 464 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 DDX21Q9NR30 783 aaKnown RBP eCLIP12.34□□□□□ -0.43
PBRM1-201ENST00000296302 URB2Q14146 1524 aaKnown RBP12.34□□□□□ -0.43
PBRM1-201ENST00000296302 CDC25BP30305 580 aa12.33□□□□□ -0.43
PBRM1-201ENST00000296302 MAGEB6Q8N7X4 407 aa12.33□□□□□ -0.43
PBRM1-201ENST00000296302 SLF1Q9BQI6 1058 aa12.33□□□□□ -0.43
PBRM1-201ENST00000296302 RGS12O14924 1447 aa12.33□□□□□ -0.43
PBRM1-201ENST00000296302 ABCC4O15439 1325 aa12.33□□□□□ -0.44
PBRM1-201ENST00000296302 CLUL1Q15846 466 aa12.33□□□□□ -0.44
PBRM1-201ENST00000296302 ME3Q16798 604 aa12.33□□□□□ -0.44
PBRM1-201ENST00000296302 FYB2Q5VWT5 728 aa12.33□□□□□ -0.44
PBRM1-201ENST00000296302 CCDC63Q8NA47 563 aa12.33□□□□□ -0.44
PBRM1-201ENST00000296302 PPP2R5BQ15173 497 aa12.33□□□□□ -0.44
PBRM1-201ENST00000296302 FCHSD1Q86WN1 690 aa12.33□□□□□ -0.44
PBRM1-201ENST00000296302 FAM71BQ8TC56 605 aa12.33□□□□□ -0.44
PBRM1-201ENST00000296302 ANTXR1Q9H6X2 564 aa12.33□□□□□ -0.44
PBRM1-201ENST00000296302 PPP2R2CQ9Y2T4 447 aa12.33□□□□□ -0.44
PBRM1-201ENST00000296302 PEG3Q9GZU2 1588 aa12.33□□□□□ -0.44
PBRM1-201ENST00000296302 JAK2O60674 1132 aa12.33□□□□□ -0.44
PBRM1-201ENST00000296302 SLC4A8Q2Y0W8 1093 aa12.33□□□□□ -0.44
PBRM1-201ENST00000296302 PNMA8AQ86V59 439 aaPredicted RBP12.33□□□□□ -0.44
PBRM1-201ENST00000296302 KBTBD3Q8NAB2 608 aa12.33□□□□□ -0.44
PBRM1-201ENST00000296302 CFAP57Q96MR6 1250 aa12.33□□□□□ -0.44
PBRM1-201ENST00000296302 CSRNP2Q9H175 543 aa12.33□□□□□ -0.44
PBRM1-201ENST00000296302 FEZ2Q9UHY8 353 aaPredicted RBP12.33□□□□□ -0.44
PBRM1-201ENST00000296302 ANAPC4Q9UJX5 808 aa12.33□□□□□ -0.44
PBRM1-201ENST00000296302 ABCC1P33527 1531 aa12.33□□□□□ -0.44
PBRM1-201ENST00000296302 GOLGA8KD6RF30 607 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 KRT40Q6A162 431 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 APPBP2Q92624 585 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 PLCB1Q9NQ66 1216 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 PYCARDQ9ULZ3 195 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 PNMA6EA0A0J9YXQ4 647 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 TNNI2P48788 182 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 NEDD9Q14511 834 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 CCDC84Q86UT8 332 aaPredicted RBP12.32□□□□□ -0.44
PBRM1-201ENST00000296302 MYCBPQ99417 103 aaPredicted RBP12.32□□□□□ -0.44
PBRM1-201ENST00000296302 EYA1Q99502 592 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 PLIN2Q99541 437 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 IMPG2Q9BZV3 1241 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 TAB2Q9NYJ8 693 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.32□□□□□ -0.44
PBRM1-201ENST00000296302 DENND4BO75064 1496 aaPredicted RBP12.32□□□□□ -0.44
PBRM1-201ENST00000296302 NR1I2O75469 434 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 PKP1Q13835 747 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 ASIC2Q16515 512 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 OTUD7BQ6GQQ9 843 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 TDRD7Q8NHU6 1098 aaKnown RBP12.32□□□□□ -0.44
PBRM1-201ENST00000296302 RABGGTAQ92696 567 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 B4E1Z4 1266 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 C6orf229H3BNL8 230 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 EXOC5O00471 708 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 SEPT6Q14141 434 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 PLCH2O75038 1416 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 TRAPPC8Q9Y2L5 1435 aa12.32□□□□□ -0.44
PBRM1-201ENST00000296302 E7EVH7 732 aa12.31□□□□□ -0.44
PBRM1-201ENST00000296302 NOL3O60936 208 aaKnown RBP12.31□□□□□ -0.44
PBRM1-201ENST00000296302 IL13P35225 146 aa12.31□□□□□ -0.44
PBRM1-201ENST00000296302 GJC1P36383 396 aa12.31□□□□□ -0.44
PBRM1-201ENST00000296302 NUCKS1Q9H1E3 243 aaKnown RBP12.31□□□□□ -0.44
PBRM1-201ENST00000296302 RABEP2Q9H5N1 569 aa12.31□□□□□ -0.44
PBRM1-201ENST00000296302 EYA2O00167 538 aa12.31□□□□□ -0.44
PBRM1-201ENST00000296302 EPB41P11171 864 aaKnown RBP12.31□□□□□ -0.44
PBRM1-201ENST00000296302 ATP6V1AP38606 617 aa12.31□□□□□ -0.44
PBRM1-201ENST00000296302 RBM6P78332 1123 aaKnown RBP12.31□□□□□ -0.44
PBRM1-201ENST00000296302 TTC38Q5R3I4 469 aa12.31□□□□□ -0.44
PBRM1-201ENST00000296302 MYSM1Q5VVJ2 828 aa12.31□□□□□ -0.44
PBRM1-201ENST00000296302 VSIG1Q86XK7 387 aa12.31□□□□□ -0.44
PBRM1-201ENST00000296302 VCXQ9H320 206 aa12.31□□□□□ -0.44
PBRM1-201ENST00000296302 GNGT1P63211 74 aa12.31□□□□□ -0.44
PBRM1-201ENST00000296302 NUP153P49790 1475 aaKnown RBP12.31□□□□□ -0.44
PBRM1-201ENST00000296302 TRMT1LQ7Z2T5 733 aaKnown RBP12.31□□□□□ -0.44
PBRM1-201ENST00000296302 UBL4BQ8N7F7 174 aa12.31□□□□□ -0.44
PBRM1-201ENST00000296302 SMARCC2Q8TAQ2 1214 aa12.31□□□□□ -0.44
PBRM1-201ENST00000296302 KIAA0232Q92628 1395 aa12.31□□□□□ -0.44
PBRM1-201ENST00000296302 IQSEC3Q9UPP2 1182 aaPredicted RBP12.31□□□□□ -0.44
PBRM1-201ENST00000296302 CAPN7Q9Y6W3 813 aa12.31□□□□□ -0.44
PBRM1-201ENST00000296302 MBD4O95243 580 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 DCAF17Q5H9S7 520 aaPredicted RBP12.3□□□□□ -0.44
PBRM1-201ENST00000296302 TRIM58Q8NG06 486 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 DBNDD2Q9BQY9 259 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 COMMD10Q9Y6G5 202 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 FAM135BQ49AJ0 1406 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 NUTM2BA6NNL0 878 aaPredicted RBP12.3□□□□□ -0.44
PBRM1-201ENST00000296302 NUTM2EB1AL46 878 aaPredicted RBP12.3□□□□□ -0.44
PBRM1-201ENST00000296302 TNFAIP3P21580 790 aa12.3□□□□□ -0.44
PBRM1-201ENST00000296302 ADKP55263 362 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms