RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 FBXO38Q6PIJ6 1188 aa15.19■□□□□ 0.02
HPS3-201ENST00000296051 MAATS1Q7Z4T9 603 aa15.19■□□□□ 0.02
HPS3-201ENST00000296051 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.19■□□□□ 0.02
HPS3-201ENST00000296051 B4E1Z4 1266 aa15.18■□□□□ 0.02
HPS3-201ENST00000296051 CERS3Q8IU89 383 aa15.18■□□□□ 0.02
HPS3-201ENST00000296051 NLGN1Q8N2Q7 840 aa15.18■□□□□ 0.02
HPS3-201ENST00000296051 CEP112Q8N8E3 955 aa15.18■□□□□ 0.02
HPS3-201ENST00000296051 IGSF22Q8N9C0 903 aa15.18■□□□□ 0.02
HPS3-201ENST00000296051 KCNH3Q9ULD8 1083 aa15.18■□□□□ 0.02
HPS3-201ENST00000296051 DENND2AQ9ULE3 1009 aa15.18■□□□□ 0.02
HPS3-201ENST00000296051 CCDC178Q5BJE1 867 aa15.18■□□□□ 0.02
HPS3-201ENST00000296051 TCERG1LQ5VWI1 586 aa15.18■□□□□ 0.02
HPS3-201ENST00000296051 USPL1Q5W0Q7 1092 aa15.18■□□□□ 0.02
HPS3-201ENST00000296051 C2CD5Q86YS7 1000 aa15.18■□□□□ 0.02
HPS3-201ENST00000296051 SYNMO15061 1565 aa15.18■□□□□ 0.02
HPS3-201ENST00000296051 USO1O60763 962 aaKnown RBP15.18■□□□□ 0.02
HPS3-201ENST00000296051 IVLP07476 585 aa15.18■□□□□ 0.02
HPS3-201ENST00000296051 PHKG2P15735 406 aa15.18■□□□□ 0.02
HPS3-201ENST00000296051 NDUFA8P51970 172 aa15.18■□□□□ 0.02
HPS3-201ENST00000296051 TRAF1Q13077 416 aa15.18■□□□□ 0.02
HPS3-201ENST00000296051 DPCR1Q3MIW9 517 aa15.18■□□□□ 0.02
HPS3-201ENST00000296051 UTP14CQ5TAP6 766 aaKnown RBP15.18■□□□□ 0.02
HPS3-201ENST00000296051 ZNF589Q86UQ0 364 aaPredicted RBP15.18■□□□□ 0.02
HPS3-201ENST00000296051 ATRIPQ8WXE1 791 aa15.18■□□□□ 0.02
HPS3-201ENST00000296051 PCDHA7Q9UN72 937 aa15.18■□□□□ 0.02
HPS3-201ENST00000296051 RTN1Q16799 776 aa15.17■□□□□ 0.02
HPS3-201ENST00000296051 ADGBQ8N7X0 1667 aa15.17■□□□□ 0.02
HPS3-201ENST00000296051 MBD4O95243 580 aa15.17■□□□□ 0.02
HPS3-201ENST00000296051 NAPAP54920 295 aa15.17■□□□□ 0.02
HPS3-201ENST00000296051 DLGAP5Q15398 846 aa15.17■□□□□ 0.02
HPS3-201ENST00000296051 BRAPQ7Z569 592 aa15.17■□□□□ 0.02
HPS3-201ENST00000296051 TDRD7Q8NHU6 1098 aaKnown RBP15.17■□□□□ 0.02
HPS3-201ENST00000296051 CALML4Q96GE6 196 aa15.17■□□□□ 0.02
HPS3-201ENST00000296051 CNNM2Q9H8M5 875 aa15.17■□□□□ 0.02
HPS3-201ENST00000296051 TTC37Q6PGP7 1564 aa15.17■□□□□ 0.02
HPS3-201ENST00000296051 AKR1B15C9JRZ8 316 aaPredicted RBP15.17■□□□□ 0.02
HPS3-201ENST00000296051 PDE6BP35913 854 aa15.17■□□□□ 0.02
HPS3-201ENST00000296051 GTF2IP78347 998 aa15.17■□□□□ 0.02
HPS3-201ENST00000296051 CLEC17AQ6ZS10 378 aa15.17■□□□□ 0.02
HPS3-201ENST00000296051 TMTC2Q8N394 836 aa15.17■□□□□ 0.02
HPS3-201ENST00000296051 MRFAP1L1Q96HT8 127 aa15.16■□□□□ 0.02
HPS3-201ENST00000296051 ELP1O95163 1332 aa15.16■□□□□ 0.02
HPS3-201ENST00000296051 GNAQP50148 359 aa15.16■□□□□ 0.02
HPS3-201ENST00000296051 TTC31Q49AM3 519 aaPredicted RBP15.16■□□□□ 0.02
HPS3-201ENST00000296051 KANK3Q6NY19 840 aa15.16■□□□□ 0.02
HPS3-201ENST00000296051 PSMB7Q99436 277 aa15.16■□□□□ 0.02
HPS3-201ENST00000296051 TCHPQ9BT92 498 aa15.16■□□□□ 0.02
HPS3-201ENST00000296051 hCG_1642624A0A1W2PR95 340 aa15.16■□□□□ 0.02
HPS3-201ENST00000296051 USP27XA6NNY8 438 aa15.16■□□□□ 0.02
HPS3-201ENST00000296051 DESP17661 470 aa15.16■□□□□ 0.02
HPS3-201ENST00000296051 ERCC3P19447 782 aa15.16■□□□□ 0.02
HPS3-201ENST00000296051 HDXQ7Z353 690 aa15.16■□□□□ 0.02
HPS3-201ENST00000296051 SYCP3Q8IZU3 236 aa15.16■□□□□ 0.02
HPS3-201ENST00000296051 FANCLQ9NW38 375 aa15.16■□□□□ 0.02
HPS3-201ENST00000296051 PRDM1O75626 825 aa15.16■□□□□ 0.02
HPS3-201ENST00000296051 NLRP12P59046 1061 aa15.16■□□□□ 0.02
HPS3-201ENST00000296051 SCRN1Q12765 414 aa15.16■□□□□ 0.02
HPS3-201ENST00000296051 CCDC144BQ3MJ40 725 aa15.16■□□□□ 0.02
HPS3-201ENST00000296051 SUPT20HQ8NEM7 779 aa15.16■□□□□ 0.02
HPS3-201ENST00000296051 MCM3P25205 808 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 GYS2P54840 703 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 UBXN1Q04323 297 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 PUM3Q15397 648 aaKnown RBP15.15■□□□□ 0.02
HPS3-201ENST00000296051 IVNS1ABPQ9Y6Y0 642 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 ABCA8O94911 1581 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 TRIM75PA6NK02 468 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 ARHGAP6O43182 974 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 TUBB4AP04350 444 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 TICAM2Q86XR7 235 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 PLEKHA4Q9H4M7 779 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 SAMD9LQ8IVG5 1584 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 MACROD2A1Z1Q3 448 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 SPDYE3A6NKU9 549 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 TMCO5BA8MYB1 307 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 PFKFB1P16118 471 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 EIF4A1P60842 406 aaKnown RBP15.15■□□□□ 0.02
HPS3-201ENST00000296051 ARID5AQ03989 594 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 TTLL7Q6ZT98 887 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 MAP4K1Q92918 833 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 CLIC6Q96NY7 704 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 GOPCQ9HD26 462 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 TSPOAP1O95153 1857 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 KIF24Q5T7B8 1368 aa15.15■□□□□ 0.02
HPS3-201ENST00000296051 B4DLN1 442 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 E7EWF7 191 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 EBAG9O00559 213 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 ERLIN2O94905 339 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 ADD1P35611 737 aaKnown RBP15.14■□□□□ 0.01
HPS3-201ENST00000296051 MRPL12P52815 198 aaKnown RBP15.14■□□□□ 0.01
HPS3-201ENST00000296051 MYSM1Q5VVJ2 828 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 NBPF11Q86T75 865 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 IMPACTQ9P2X3 320 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 CLIC4Q9Y696 253 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 NOP2P46087 812 aaKnown RBP15.14■□□□□ 0.01
HPS3-201ENST00000296051 PPM1FP49593 454 aaPredicted RBP15.14■□□□□ 0.01
HPS3-201ENST00000296051 PROSER3Q2NL68 480 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 KBTBD3Q8NAB2 608 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 BICD1Q96G01 975 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 CARD10Q9BWT7 1032 aa15.14■□□□□ 0.01
HPS3-201ENST00000296051 KCNJ14Q9UNX9 436 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms