RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 MKRN1Q9UHC7 482 aaKnown RBP33.2■■■□□ 2.91
CHCHD4-201ENST00000295767 APPP05067 770 aa33.2■■■□□ 2.9
CHCHD4-201ENST00000295767 APOBEC3FQ8IUX4 373 aaKnown RBP33.2■■■□□ 2.9
CHCHD4-201ENST00000295767 ATP8A2Q9NTI2 1148 aa33.2■■■□□ 2.9
CHCHD4-201ENST00000295767 RPAP1Q9BWH6 1393 aaPredicted RBP33.19■■■□□ 2.9
CHCHD4-201ENST00000295767 NPM3O75607 178 aaKnown RBP33.19■■■□□ 2.9
CHCHD4-201ENST00000295767 DCPSQ96C86 337 aaKnown RBP33.19■■■□□ 2.9
CHCHD4-201ENST00000295767 CLEC11AQ9Y240 323 aa33.19■■■□□ 2.9
CHCHD4-201ENST00000295767 ENTPD3O75355 529 aa33.18■■■□□ 2.9
CHCHD4-201ENST00000295767 PTH1RQ03431 593 aa33.18■■■□□ 2.9
CHCHD4-201ENST00000295767 TNFAIP1Q13829 316 aa33.18■■■□□ 2.9
CHCHD4-201ENST00000295767 ZFPM1Q8IX07 1006 aa33.18■■■□□ 2.9
CHCHD4-201ENST00000295767 OSBPL5Q9H0X9 879 aaPredicted RBP33.18■■■□□ 2.9
CHCHD4-201ENST00000295767 ANO2Q9NQ90 1003 aa33.18■■■□□ 2.9
CHCHD4-201ENST00000295767 KIAA1211Q6ZU35 1233 aa33.17■■■□□ 2.9
CHCHD4-201ENST00000295767 FAM83AQ86UY5 434 aa33.17■■■□□ 2.9
CHCHD4-201ENST00000295767 IFNL3Q8IZI9 196 aa33.17■■■□□ 2.9
CHCHD4-201ENST00000295767 DSCC1Q9BVC3 393 aa33.17■■■□□ 2.9
CHCHD4-201ENST00000295767 LDHDQ86WU2 507 aa33.17■■■□□ 2.9
CHCHD4-201ENST00000295767 LSG1Q9H089 658 aaKnown RBP33.17■■■□□ 2.9
CHCHD4-201ENST00000295767 LAMA4Q16363 1823 aa33.16■■■□□ 2.9
CHCHD4-201ENST00000295767 SIPA1L1O43166 1804 aa33.16■■■□□ 2.9
CHCHD4-201ENST00000295767 TNNI2P48788 182 aa33.16■■■□□ 2.9
CHCHD4-201ENST00000295767 GIMAP6Q6P9H5 292 aa33.16■■■□□ 2.9
CHCHD4-201ENST00000295767 FAM151AQ8WW52 585 aa33.16■■■□□ 2.9
CHCHD4-201ENST00000295767 SAP30BPQ9UHR5 308 aaKnown RBP33.16■■■□□ 2.9
CHCHD4-201ENST00000295767 RASA3Q14644 834 aa33.15■■■□□ 2.9
CHCHD4-201ENST00000295767 DDRGK1Q96HY6 314 aa33.15■■■□□ 2.9
CHCHD4-201ENST00000295767 NACAP1Q9BZK3 213 aa33.15■■■□□ 2.9
CHCHD4-201ENST00000295767 COL2A1P02458 1487 aaPredicted RBP33.14■■■□□ 2.9
CHCHD4-201ENST00000295767 KIF3CO14782 793 aa33.14■■■□□ 2.9
CHCHD4-201ENST00000295767 TDO2P48775 406 aa33.14■■■□□ 2.9
CHCHD4-201ENST00000295767 ZNF784Q8NCA9 323 aaPredicted RBP33.14■■■□□ 2.9
CHCHD4-201ENST00000295767 TMEM39BQ9GZU3 492 aa33.14■■■□□ 2.9
CHCHD4-201ENST00000295767 DEFB129Q9H1M3 183 aa33.14■■■□□ 2.9
CHCHD4-201ENST00000295767 MCM9Q9NXL9 1143 aa33.14■■■□□ 2.9
CHCHD4-201ENST00000295767 SULF1Q8IWU6 871 aa33.13■■■□□ 2.89
CHCHD4-201ENST00000295767 NAPBQ9H115 298 aa33.13■■■□□ 2.89
CHCHD4-201ENST00000295767 REC8O95072 547 aa33.13■■■□□ 2.89
CHCHD4-201ENST00000295767 FGAP02671 866 aa33.13■■■□□ 2.89
CHCHD4-201ENST00000295767 ALX1Q15699 326 aa33.13■■■□□ 2.89
CHCHD4-201ENST00000295767 SLC4A8Q2Y0W8 1093 aa33.13■■■□□ 2.89
CHCHD4-201ENST00000295767 SH3BP5LQ7L8J4 393 aa33.13■■■□□ 2.89
CHCHD4-201ENST00000295767 KRT26Q7Z3Y9 468 aa33.13■■■□□ 2.89
CHCHD4-201ENST00000295767 PALD1Q9ULE6 856 aa33.13■■■□□ 2.89
CHCHD4-201ENST00000295767 ADM5C9JUS6 153 aa33.12■■■□□ 2.89
CHCHD4-201ENST00000295767 SEC24BO95487 1268 aa33.12■■■□□ 2.89
CHCHD4-201ENST00000295767 MAP1SQ66K74 1059 aaPredicted RBP33.12■■■□□ 2.89
CHCHD4-201ENST00000295767 MAP4K1Q92918 833 aa33.12■■■□□ 2.89
CHCHD4-201ENST00000295767 ZMYM6O95789 1325 aa33.11■■■□□ 2.89
CHCHD4-201ENST00000295767 ATRNL1Q5VV63 1379 aa33.11■■■□□ 2.89
CHCHD4-201ENST00000295767 DDTLA6NHG4 134 aaPredicted RBP33.11■■■□□ 2.89
CHCHD4-201ENST00000295767 CTR9Q6PD62 1173 aa33.11■■■□□ 2.89
CHCHD4-201ENST00000295767 CDAN1Q8IWY9 1227 aa33.11■■■□□ 2.89
CHCHD4-201ENST00000295767 USP17L12C9JPN9 530 aa33.1■■■□□ 2.89
CHCHD4-201ENST00000295767 USP17L21D6R901 530 aa33.1■■■□□ 2.89
CHCHD4-201ENST00000295767 ZSCAN29Q8IWY8 852 aaPredicted RBP33.1■■■□□ 2.89
CHCHD4-201ENST00000295767 GLIS2Q9BZE0 524 aaPredicted RBP33.1■■■□□ 2.89
CHCHD4-201ENST00000295767 TEPSINQ96N21 525 aa33.1■■■□□ 2.89
CHCHD4-201ENST00000295767 ARPP21Q9UBL0 812 aaPredicted RBP33.1■■■□□ 2.89
CHCHD4-201ENST00000295767 PPP2R3BQ9Y5P8 575 aa33.1■■■□□ 2.89
CHCHD4-201ENST00000295767 CYP2D7A0A087X1C5 515 aa33.09■■■□□ 2.89
CHCHD4-201ENST00000295767 CYP2D6P10635 497 aa33.09■■■□□ 2.89
CHCHD4-201ENST00000295767 EVX2Q03828 476 aa33.09■■■□□ 2.89
CHCHD4-201ENST00000295767 DLK2Q6UY11 383 aa33.09■■■□□ 2.89
CHCHD4-201ENST00000295767 CDC37L1Q7L3B6 337 aa33.09■■■□□ 2.89
CHCHD4-201ENST00000295767 USP48Q86UV5 1035 aa33.09■■■□□ 2.89
CHCHD4-201ENST00000295767 POLR3DP05423 398 aaPredicted RBP33.08■■■□□ 2.89
CHCHD4-201ENST00000295767 PRAMEF18Q5VWM3 479 aa33.08■■■□□ 2.89
CHCHD4-201ENST00000295767 DHX36Q9H2U1 1008 aaKnown RBP33.08■■■□□ 2.89
CHCHD4-201ENST00000295767 RBM8AQ9Y5S9 174 aaKnown RBP33.08■■■□□ 2.89
CHCHD4-201ENST00000295767 U3KPZ7 1027 aaPredicted RBP33.08■■■□□ 2.89
CHCHD4-201ENST00000295767 SBK1Q52WX2 424 aa33.07■■■□□ 2.88
CHCHD4-201ENST00000295767 MYH8P13535 1937 aa33.07■■■□□ 2.88
CHCHD4-201ENST00000295767 SMIM22K7EJ46 135 aa33.06■■■□□ 2.88
CHCHD4-201ENST00000295767 PLCD1P51178 756 aa33.06■■■□□ 2.88
CHCHD4-201ENST00000295767 C12orf60Q5U649 245 aa33.06■■■□□ 2.88
CHCHD4-201ENST00000295767 CHADLQ6NUI6 762 aa33.06■■■□□ 2.88
CHCHD4-201ENST00000295767 CSRNP1Q96S65 589 aa33.06■■■□□ 2.88
CHCHD4-201ENST00000295767 MINDY4BA8MYZ0 360 aa33.06■■■□□ 2.88
CHCHD4-201ENST00000295767 AMOTL1Q8IY63 956 aa33.06■■■□□ 2.88
CHCHD4-201ENST00000295767 TTC6Q86TZ1 520 aa33.05■■■□□ 2.88
CHCHD4-201ENST00000295767 BACH2Q9BYV9 841 aa33.05■■■□□ 2.88
CHCHD4-201ENST00000295767 CTNNA3Q9UI47 895 aa33.05■■■□□ 2.88
CHCHD4-201ENST00000295767 EIF5BO60841 1220 aaKnown RBP33.04■■■□□ 2.88
CHCHD4-201ENST00000295767 HLA-DOAP06340 250 aa33.04■■■□□ 2.88
CHCHD4-201ENST00000295767 NBPF12Q5TAG4 269 aaPredicted RBP33.04■■■□□ 2.88
CHCHD4-201ENST00000295767 PPARAQ07869 468 aa33.03■■■□□ 2.88
CHCHD4-201ENST00000295767 USP26Q9BXU7 913 aa33.03■■■□□ 2.88
CHCHD4-201ENST00000295767 SSC5DA1L4H1 1573 aa33.03■■■□□ 2.88
CHCHD4-201ENST00000295767 HAND2P61296 217 aa33.02■■■□□ 2.88
CHCHD4-201ENST00000295767 PI4KBQ9UBF8 816 aa33.02■■■□□ 2.88
CHCHD4-201ENST00000295767 EPB41L2O43491 1005 aaKnown RBP33.02■■■□□ 2.88
CHCHD4-201ENST00000295767 SLURP2P0DP57 97 aa33.02■■■□□ 2.88
CHCHD4-201ENST00000295767 NECTIN1Q15223 517 aa33.02■■■□□ 2.88
CHCHD4-201ENST00000295767 CDCA5Q96FF9 252 aa33.02■■■□□ 2.88
CHCHD4-201ENST00000295767 TRPM7Q96QT4 1865 aa33.01■■■□□ 2.87
CHCHD4-201ENST00000295767 ROBO3Q96MS0 1386 aa33.01■■■□□ 2.87
CHCHD4-201ENST00000295767 TRAF5O00463 557 aa33.01■■■□□ 2.87
CHCHD4-201ENST00000295767 CTDSPL2Q05D32 466 aa33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms