RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 SLC5A1P13866 664 aa15.78■□□□□ 0.12
NCSTN-201ENST00000294785 GNAT2P19087 354 aa15.78■□□□□ 0.12
NCSTN-201ENST00000294785 IL6STP40189 918 aaPredicted RBP15.78■□□□□ 0.12
NCSTN-201ENST00000294785 FANCCQ00597 558 aa15.78■□□□□ 0.12
NCSTN-201ENST00000294785 MYL5Q02045 173 aa15.78■□□□□ 0.12
NCSTN-201ENST00000294785 SSRP1Q08945 709 aaKnown RBP15.78■□□□□ 0.12
NCSTN-201ENST00000294785 ARMCX5Q6P1M9 558 aa15.78■□□□□ 0.12
NCSTN-201ENST00000294785 IFNL3Q8IZI9 196 aa15.78■□□□□ 0.12
NCSTN-201ENST00000294785 SPATA5Q8NB90 893 aa15.78■□□□□ 0.12
NCSTN-201ENST00000294785 PHKBQ93100 1093 aa15.78■□□□□ 0.12
NCSTN-201ENST00000294785 NAPBQ9H115 298 aa15.78■□□□□ 0.12
NCSTN-201ENST00000294785 SLC12A7Q9Y666 1083 aa15.78■□□□□ 0.12
NCSTN-201ENST00000294785 FMNL1O95466 1100 aaPredicted RBP15.78■□□□□ 0.12
NCSTN-201ENST00000294785 IFNAR1P17181 557 aa15.78■□□□□ 0.12
NCSTN-201ENST00000294785 RCAN1P53805 252 aa15.78■□□□□ 0.12
NCSTN-201ENST00000294785 FAM217BQ9NTX9 383 aaPredicted RBP15.78■□□□□ 0.12
NCSTN-201ENST00000294785 HOOK1Q9UJC3 728 aaKnown RBP15.78■□□□□ 0.12
NCSTN-201ENST00000294785 RANBP6O60518 1105 aaKnown RBP15.77■□□□□ 0.12
NCSTN-201ENST00000294785 CBX1P83916 185 aa15.77■□□□□ 0.12
NCSTN-201ENST00000294785 ZNF34Q8IZ26 560 aa15.77■□□□□ 0.12
NCSTN-201ENST00000294785 NOL10Q9BSC4 688 aaKnown RBP15.77■□□□□ 0.12
NCSTN-201ENST00000294785 OGFRQ9NZT2 677 aa15.77■□□□□ 0.12
NCSTN-201ENST00000294785 E4F1Q66K89 784 aaPredicted RBP15.77■□□□□ 0.11
NCSTN-201ENST00000294785 TRMT1Q9NXH9 659 aaKnown RBP15.77■□□□□ 0.11
NCSTN-201ENST00000294785 IFIT3O14879 490 aaKnown RBP15.76■□□□□ 0.11
NCSTN-201ENST00000294785 SART3Q15020 963 aaKnown RBP15.76■□□□□ 0.11
NCSTN-201ENST00000294785 AKNAD1Q5T1N1 836 aa15.76■□□□□ 0.11
NCSTN-201ENST00000294785 OLFM4Q6UX06 510 aa15.76■□□□□ 0.11
NCSTN-201ENST00000294785 HSD3B7Q9H2F3 369 aa15.76■□□□□ 0.11
NCSTN-201ENST00000294785 EPB41L4AQ9HCS5 686 aaPredicted RBP15.76■□□□□ 0.11
NCSTN-201ENST00000294785 ZBTB1Q9Y2K1 713 aa15.76■□□□□ 0.11
NCSTN-201ENST00000294785 PNPLA7Q6ZV29 1317 aa15.76■□□□□ 0.11
NCSTN-201ENST00000294785 RXRAP19793 462 aa15.76■□□□□ 0.11
NCSTN-201ENST00000294785 DMTNQ08495 405 aa15.76■□□□□ 0.11
NCSTN-201ENST00000294785 SAFBQ15424 915 aaKnown RBP eCLIP15.76■□□□□ 0.11
NCSTN-201ENST00000294785 KRBA2Q6ZNG9 492 aa15.76■□□□□ 0.11
NCSTN-201ENST00000294785 NOSTRINQ8IVI9 506 aa15.76■□□□□ 0.11
NCSTN-201ENST00000294785 KRI1Q8N9T8 703 aaKnown RBP15.76■□□□□ 0.11
NCSTN-201ENST00000294785 NKX2-3Q8TAU0 364 aa15.76■□□□□ 0.11
NCSTN-201ENST00000294785 PKNOX2Q96KN3 472 aa15.76■□□□□ 0.11
NCSTN-201ENST00000294785 PPP1R13BQ96KQ4 1090 aa15.76■□□□□ 0.11
NCSTN-201ENST00000294785 GTPBP4Q9BZE4 634 aaKnown RBP15.76■□□□□ 0.11
NCSTN-201ENST00000294785 SENP2Q9HC62 589 aa15.76■□□□□ 0.11
NCSTN-201ENST00000294785 ZSWIM5Q9P217 1185 aa15.76■□□□□ 0.11
NCSTN-201ENST00000294785 SLU7O95391 586 aaKnown RBP15.75■□□□□ 0.11
NCSTN-201ENST00000294785 ZSCAN20P17040 1043 aaPredicted RBP15.75■□□□□ 0.11
NCSTN-201ENST00000294785 DZIP3Q86Y13 1208 aaKnown RBP15.75■□□□□ 0.11
NCSTN-201ENST00000294785 TMTC2Q8N394 836 aa15.75■□□□□ 0.11
NCSTN-201ENST00000294785 STAG1Q8WVM7 1258 aa15.75■□□□□ 0.11
NCSTN-201ENST00000294785 NACAP1Q9BZK3 213 aa15.75■□□□□ 0.11
NCSTN-201ENST00000294785 LAMB2P55268 1798 aa15.75■□□□□ 0.11
NCSTN-201ENST00000294785 COL14A1Q05707 1796 aaKnown RBP15.75■□□□□ 0.11
NCSTN-201ENST00000294785 MBD4O95243 580 aa15.75■□□□□ 0.11
NCSTN-201ENST00000294785 MMP1P03956 469 aa15.75■□□□□ 0.11
NCSTN-201ENST00000294785 LMOD1P29536 600 aaPredicted RBP15.75■□□□□ 0.11
NCSTN-201ENST00000294785 MFSD6Q6ZSS7 791 aa15.75■□□□□ 0.11
NCSTN-201ENST00000294785 TRIM22Q8IYM9 498 aa15.75■□□□□ 0.11
NCSTN-201ENST00000294785 MAGEB6Q8N7X4 407 aa15.75■□□□□ 0.11
NCSTN-201ENST00000294785 SLC4A9Q96Q91 983 aa15.75■□□□□ 0.11
NCSTN-201ENST00000294785 SLC26A6Q9BXS9 759 aa15.75■□□□□ 0.11
NCSTN-201ENST00000294785 L2HGDHQ9H9P8 463 aa15.75■□□□□ 0.11
NCSTN-201ENST00000294785 KCNH3Q9ULD8 1083 aa15.75■□□□□ 0.11
NCSTN-201ENST00000294785 CNNM3Q8NE01 707 aa15.74■□□□□ 0.11
NCSTN-201ENST00000294785 ZNF397Q8NF99 534 aaPredicted RBP15.74■□□□□ 0.11
NCSTN-201ENST00000294785 FOXP1Q9H334 677 aaPredicted RBP15.74■□□□□ 0.11
NCSTN-201ENST00000294785 ZNF215Q9UL58 517 aaPredicted RBP15.74■□□□□ 0.11
NCSTN-201ENST00000294785 WNK3Q9BYP7 1800 aa15.74■□□□□ 0.11
NCSTN-201ENST00000294785 CCDC196A0A1B0GTZ2 297 aa15.74■□□□□ 0.11
NCSTN-201ENST00000294785 UBASH3AP57075 661 aa15.74■□□□□ 0.11
NCSTN-201ENST00000294785 PNOCQ13519 176 aa15.74■□□□□ 0.11
NCSTN-201ENST00000294785 RILPL1Q5EBL4 403 aa15.74■□□□□ 0.11
NCSTN-201ENST00000294785 METTL16Q86W50 562 aaKnown RBP15.74■□□□□ 0.11
NCSTN-201ENST00000294785 PRDM4Q9UKN5 801 aa15.74■□□□□ 0.11
NCSTN-201ENST00000294785 GSG1L2A8MUP6 293 aa15.74■□□□□ 0.11
NCSTN-201ENST00000294785 RASGRF1Q13972 1273 aa15.74■□□□□ 0.11
NCSTN-201ENST00000294785 PHLPP1O60346 1717 aa15.74■□□□□ 0.11
NCSTN-201ENST00000294785 SERPINC1P01008 464 aa15.73■□□□□ 0.11
NCSTN-201ENST00000294785 FCHSD1Q86WN1 690 aa15.73■□□□□ 0.11
NCSTN-201ENST00000294785 RNF41Q9H4P4 317 aaPredicted RBP15.73■□□□□ 0.11
NCSTN-201ENST00000294785 RTL9Q8NET4 1388 aa15.73■□□□□ 0.11
NCSTN-201ENST00000294785 ERICH2A1L162 156 aa15.73■□□□□ 0.11
NCSTN-201ENST00000294785 DEXIO95424 95 aa15.73■□□□□ 0.11
NCSTN-201ENST00000294785 ZNF579Q8NAF0 562 aaKnown RBP15.73■□□□□ 0.11
NCSTN-201ENST00000294785 CLIC6Q96NY7 704 aa15.73■□□□□ 0.11
NCSTN-201ENST00000294785 DACH1Q9UI36 760 aa15.73■□□□□ 0.11
NCSTN-201ENST00000294785 DDX41Q9UJV9 622 aaKnown RBP15.73■□□□□ 0.11
NCSTN-201ENST00000294785 MORC2Q9Y6X9 1032 aaPredicted RBP15.73■□□□□ 0.11
NCSTN-201ENST00000294785 COL22A1Q8NFW1 1626 aaPredicted RBP15.73■□□□□ 0.11
NCSTN-201ENST00000294785 SLIT2O94813 1529 aa15.73■□□□□ 0.11
NCSTN-201ENST00000294785 ATP1A3P13637 1013 aa15.72■□□□□ 0.11
NCSTN-201ENST00000294785 CTDSPL2Q05D32 466 aa15.72■□□□□ 0.11
NCSTN-201ENST00000294785 WTAPQ15007 396 aa15.72■□□□□ 0.11
NCSTN-201ENST00000294785 PPP2R5BQ15173 497 aa15.72■□□□□ 0.11
NCSTN-201ENST00000294785 RTN1Q16799 776 aa15.72■□□□□ 0.11
NCSTN-201ENST00000294785 LONRF3Q496Y0 759 aa15.72■□□□□ 0.11
NCSTN-201ENST00000294785 VSTM4Q8IW00 320 aa15.72■□□□□ 0.11
NCSTN-201ENST00000294785 MPHOSPH8Q99549 860 aa15.72■□□□□ 0.11
NCSTN-201ENST00000294785 TMX1Q9H3N1 280 aa15.72■□□□□ 0.11
NCSTN-201ENST00000294785 MDM2Q00987 491 aaPredicted RBP15.72■□□□□ 0.11
NCSTN-201ENST00000294785 NT5DC1Q5TFE4 455 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms