RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 FSIP1Q8NA03 581 aa16.29■□□□□ 0.2
NXF1-201ENST00000294172 FAM200AQ8TCP9 573 aa16.29■□□□□ 0.2
NXF1-201ENST00000294172 ZNF384Q8TF68 577 aa16.29■□□□□ 0.2
NXF1-201ENST00000294172 SLC26A6Q9BXS9 759 aa16.29■□□□□ 0.2
NXF1-201ENST00000294172 PCDHA7Q9UN72 937 aa16.29■□□□□ 0.2
NXF1-201ENST00000294172 UBE2Q2LH0YL09 131 aa16.28■□□□□ 0.2
NXF1-201ENST00000294172 GNL2Q13823 731 aaKnown RBP16.28■□□□□ 0.2
NXF1-201ENST00000294172 NTRK3Q16288 839 aa16.28■□□□□ 0.2
NXF1-201ENST00000294172 RBM43Q6ZSC3 357 aaKnown RBP16.28■□□□□ 0.2
NXF1-201ENST00000294172 UBAC1Q9BSL1 405 aa16.28■□□□□ 0.2
NXF1-201ENST00000294172 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.28■□□□□ 0.2
NXF1-201ENST00000294172 MYH15Q9Y2K3 1946 aa16.28■□□□□ 0.2
NXF1-201ENST00000294172 CYP2D7A0A087X1C5 515 aa16.28■□□□□ 0.2
NXF1-201ENST00000294172 SEMA3EO15041 775 aa16.28■□□□□ 0.2
NXF1-201ENST00000294172 NFIXQ14938 502 aa16.28■□□□□ 0.2
NXF1-201ENST00000294172 KRT40Q6A162 431 aa16.28■□□□□ 0.2
NXF1-201ENST00000294172 LUZP1Q86V48 1076 aa16.28■□□□□ 0.2
NXF1-201ENST00000294172 TXNRD3Q86VQ6 643 aa16.28■□□□□ 0.2
NXF1-201ENST00000294172 LINC00301Q8NCQ3 95 aa16.28■□□□□ 0.2
NXF1-201ENST00000294172 LRRC4BQ9NT99 713 aa16.28■□□□□ 0.2
NXF1-201ENST00000294172 C4AP0C0L4 1744 aa16.27■□□□□ 0.2
NXF1-201ENST00000294172 C4BP0C0L5 1744 aa16.27■□□□□ 0.2
NXF1-201ENST00000294172 CASZ1Q86V15 1759 aa16.27■□□□□ 0.2
NXF1-201ENST00000294172 KINO60870 393 aaKnown RBP16.27■□□□□ 0.2
NXF1-201ENST00000294172 MECOMQ03112 1051 aa16.27■□□□□ 0.2
NXF1-201ENST00000294172 SSRP1Q08945 709 aaKnown RBP16.27■□□□□ 0.2
NXF1-201ENST00000294172 SNW1Q13573 536 aaKnown RBP16.27■□□□□ 0.2
NXF1-201ENST00000294172 TRIM29Q14134 588 aa16.27■□□□□ 0.2
NXF1-201ENST00000294172 SLC51AQ86UW1 340 aa16.27■□□□□ 0.2
NXF1-201ENST00000294172 CCDC82Q8N4S0 544 aa16.27■□□□□ 0.2
NXF1-201ENST00000294172 NUP133Q8WUM0 1156 aa16.27■□□□□ 0.2
NXF1-201ENST00000294172 NSUN4Q96CB9 384 aaKnown RBP16.27■□□□□ 0.2
NXF1-201ENST00000294172 ANKIB1Q9P2G1 1089 aa16.27■□□□□ 0.2
NXF1-201ENST00000294172 ZKSCAN5Q9Y2L8 839 aa16.27■□□□□ 0.2
NXF1-201ENST00000294172 HSPA1LP34931 641 aa16.27■□□□□ 0.19
NXF1-201ENST00000294172 FAM160A1Q05DH4 1040 aa16.27■□□□□ 0.19
NXF1-201ENST00000294172 CNBD1Q8NA66 436 aa16.27■□□□□ 0.19
NXF1-201ENST00000294172 AATFQ9NY61 560 aaKnown RBP eCLIP16.27■□□□□ 0.19
NXF1-201ENST00000294172 CHD4Q14839 1912 aa16.26■□□□□ 0.19
NXF1-201ENST00000294172 A0A1B0GUL6 1792 aa16.26■□□□□ 0.19
NXF1-201ENST00000294172 SPTLC2O15270 562 aa16.26■□□□□ 0.19
NXF1-201ENST00000294172 AP5Z1O43299 807 aa16.26■□□□□ 0.19
NXF1-201ENST00000294172 PRDX5P30044 214 aa16.26■□□□□ 0.19
NXF1-201ENST00000294172 RTN1Q16799 776 aa16.26■□□□□ 0.19
NXF1-201ENST00000294172 CMTR1Q8N1G2 835 aaKnown RBP16.26■□□□□ 0.19
NXF1-201ENST00000294172 KCNG4Q8TDN1 519 aa16.26■□□□□ 0.19
NXF1-201ENST00000294172 ESR2Q92731 530 aa16.26■□□□□ 0.19
NXF1-201ENST00000294172 POLR3EQ9NVU0 708 aa16.26■□□□□ 0.19
NXF1-201ENST00000294172 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.25■□□□□ 0.19
NXF1-201ENST00000294172 A0A1B0GVL5 298 aa16.25■□□□□ 0.19
NXF1-201ENST00000294172 PRDM1O75626 825 aa16.25■□□□□ 0.19
NXF1-201ENST00000294172 ADALQ6DHV7 355 aa16.25■□□□□ 0.19
NXF1-201ENST00000294172 MRPS27Q92552 414 aaKnown RBP16.25■□□□□ 0.19
NXF1-201ENST00000294172 DNAJC25Q9H1X3 360 aa16.25■□□□□ 0.19
NXF1-201ENST00000294172 CBX8Q9HC52 389 aa16.25■□□□□ 0.19
NXF1-201ENST00000294172 TRPC5Q9UL62 973 aaPredicted RBP16.25■□□□□ 0.19
NXF1-201ENST00000294172 TIAM2Q8IVF5 1701 aa16.25■□□□□ 0.19
NXF1-201ENST00000294172 YEATS4O95619 227 aa16.25■□□□□ 0.19
NXF1-201ENST00000294172 ANO1Q5XXA6 986 aa16.25■□□□□ 0.19
NXF1-201ENST00000294172 TMTC2Q8N394 836 aa16.25■□□□□ 0.19
NXF1-201ENST00000294172 ENGASEQ8NFI3 743 aa16.25■□□□□ 0.19
NXF1-201ENST00000294172 BCL11BQ9C0K0 894 aaPredicted RBP16.25■□□□□ 0.19
NXF1-201ENST00000294172 ANAPC4Q9UJX5 808 aa16.25■□□□□ 0.19
NXF1-201ENST00000294172 CACNA1SQ13698 1873 aa16.25■□□□□ 0.19
NXF1-201ENST00000294172 COL24A1Q17RW2 1714 aa16.25■□□□□ 0.19
NXF1-201ENST00000294172 FMNL1O95466 1100 aaPredicted RBP16.24■□□□□ 0.19
NXF1-201ENST00000294172 BRIP1Q9BX63 1249 aa16.24■□□□□ 0.19
NXF1-201ENST00000294172 TNKSO95271 1327 aa16.24■□□□□ 0.19
NXF1-201ENST00000294172 USP17L12C9JPN9 530 aa16.24■□□□□ 0.19
NXF1-201ENST00000294172 USP17L21D6R901 530 aa16.24■□□□□ 0.19
NXF1-201ENST00000294172 CTAGE5O15320 804 aa16.24■□□□□ 0.19
NXF1-201ENST00000294172 ONECUT3O60422 494 aaPredicted RBP16.24■□□□□ 0.19
NXF1-201ENST00000294172 IFNAR1P17181 557 aa16.24■□□□□ 0.19
NXF1-201ENST00000294172 GUCY1A2P33402 732 aa16.24■□□□□ 0.19
NXF1-201ENST00000294172 ZNF165P49910 485 aa16.24■□□□□ 0.19
NXF1-201ENST00000294172 NDUFA8P51970 172 aa16.24■□□□□ 0.19
NXF1-201ENST00000294172 TRIM22Q8IYM9 498 aa16.24■□□□□ 0.19
NXF1-201ENST00000294172 ZNF654Q8IZM8 581 aa16.24■□□□□ 0.19
NXF1-201ENST00000294172 ZNF830Q96NB3 372 aaPredicted RBP16.24■□□□□ 0.19
NXF1-201ENST00000294172 MARCKSP29966 332 aaPredicted RBP16.23■□□□□ 0.19
NXF1-201ENST00000294172 GRAPQ13588 217 aa16.23■□□□□ 0.19
NXF1-201ENST00000294172 CTR9Q6PD62 1173 aa16.23■□□□□ 0.19
NXF1-201ENST00000294172 GRAPLQ8TC17 118 aaPredicted RBP16.23■□□□□ 0.19
NXF1-201ENST00000294172 ERCC4Q92889 916 aaPredicted RBP16.23■□□□□ 0.19
NXF1-201ENST00000294172 FMR1NBQ8N0W7 255 aaPredicted RBP16.23■□□□□ 0.19
NXF1-201ENST00000294172 FANCBQ8NB91 859 aa16.23■□□□□ 0.19
NXF1-201ENST00000294172 WASF1Q92558 559 aa16.23■□□□□ 0.19
NXF1-201ENST00000294172 SDF4Q9BRK5 362 aa16.23■□□□□ 0.19
NXF1-201ENST00000294172 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.23■□□□□ 0.19
NXF1-201ENST00000294172 CCDC196A0A1B0GTZ2 297 aa16.22■□□□□ 0.19
NXF1-201ENST00000294172 A0A1W2PQ27 194 aa16.22■□□□□ 0.19
NXF1-201ENST00000294172 A0A1W2PQ64 194 aa16.22■□□□□ 0.19
NXF1-201ENST00000294172 A0A1W2PQD8 194 aa16.22■□□□□ 0.19
NXF1-201ENST00000294172 EVX2Q03828 476 aa16.22■□□□□ 0.19
NXF1-201ENST00000294172 DZIP1Q86YF9 867 aaKnown RBP16.22■□□□□ 0.19
NXF1-201ENST00000294172 TAF1LQ8IZX4 1826 aa16.22■□□□□ 0.19
NXF1-201ENST00000294172 ZSCAN10Q96SZ4 725 aaPredicted RBP16.22■□□□□ 0.19
NXF1-201ENST00000294172 MTA3Q9BTC8 594 aa16.22■□□□□ 0.19
NXF1-201ENST00000294172 CRNKL1Q9BZJ0 848 aaKnown RBP16.22■□□□□ 0.19
NXF1-201ENST00000294172 STK36Q9NRP7 1315 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms