RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 SPECC1Q5M775 1068 aa18.32■□□□□ 0.52
NCKIPSD-201ENST00000294129 ANKRD18AQ8IVF6 992 aa18.32■□□□□ 0.52
NCKIPSD-201ENST00000294129 KLHL34Q8N239 644 aa18.32■□□□□ 0.52
NCKIPSD-201ENST00000294129 AK7Q96M32 723 aa18.32■□□□□ 0.52
NCKIPSD-201ENST00000294129 BCL11BQ9C0K0 894 aaPredicted RBP18.32■□□□□ 0.52
NCKIPSD-201ENST00000294129 ZNF652Q9Y2D9 606 aa18.32■□□□□ 0.52
NCKIPSD-201ENST00000294129 SSRP1Q08945 709 aaKnown RBP18.31■□□□□ 0.52
NCKIPSD-201ENST00000294129 DHX40Q8IX18 779 aaKnown RBP18.31■□□□□ 0.52
NCKIPSD-201ENST00000294129 LINC00116Q8NCU8 138 aa18.31■□□□□ 0.52
NCKIPSD-201ENST00000294129 CDC5LQ99459 802 aaKnown RBP18.31■□□□□ 0.52
NCKIPSD-201ENST00000294129 COL4A1P02462 1669 aa18.31■□□□□ 0.52
NCKIPSD-201ENST00000294129 PRDM1O75626 825 aa18.31■□□□□ 0.52
NCKIPSD-201ENST00000294129 TPM3P06753 285 aa18.31■□□□□ 0.52
NCKIPSD-201ENST00000294129 SLC3A2P08195 630 aaKnown RBP18.31■□□□□ 0.52
NCKIPSD-201ENST00000294129 WTAPQ15007 396 aa18.31■□□□□ 0.52
NCKIPSD-201ENST00000294129 SLC4A8Q2Y0W8 1093 aa18.31■□□□□ 0.52
NCKIPSD-201ENST00000294129 ERICH2A1L162 156 aa18.3■□□□□ 0.52
NCKIPSD-201ENST00000294129 NTRK3Q16288 839 aa18.3■□□□□ 0.52
NCKIPSD-201ENST00000294129 A0A1W2PQ27 194 aa18.3■□□□□ 0.52
NCKIPSD-201ENST00000294129 A0A1W2PQ64 194 aa18.3■□□□□ 0.52
NCKIPSD-201ENST00000294129 A0A1W2PQD8 194 aa18.3■□□□□ 0.52
NCKIPSD-201ENST00000294129 hCG_1642624A0A1W2PR95 340 aa18.3■□□□□ 0.52
NCKIPSD-201ENST00000294129 DYNLL1P63167 89 aaKnown RBP18.3■□□□□ 0.52
NCKIPSD-201ENST00000294129 CACTINQ8WUQ7 758 aaKnown RBP18.3■□□□□ 0.52
NCKIPSD-201ENST00000294129 C16orf45Q96MC5 204 aaPredicted RBP18.3■□□□□ 0.52
NCKIPSD-201ENST00000294129 KIAA1468Q9P260 1216 aa18.3■□□□□ 0.52
NCKIPSD-201ENST00000294129 CELF1Q92879 486 aaKnown RBP18.3■□□□□ 0.52
NCKIPSD-201ENST00000294129 KRT23Q9C075 422 aa18.3■□□□□ 0.52
NCKIPSD-201ENST00000294129 SPTLC3Q9NUV7 552 aa18.3■□□□□ 0.52
NCKIPSD-201ENST00000294129 SPATA31A5Q5VU36 1347 aa18.29■□□□□ 0.52
NCKIPSD-201ENST00000294129 SPATA31A7Q8IWB4 1347 aa18.29■□□□□ 0.52
NCKIPSD-201ENST00000294129 KLRK1P26718 216 aa18.29■□□□□ 0.52
NCKIPSD-201ENST00000294129 SART3Q15020 963 aaKnown RBP18.29■□□□□ 0.52
NCKIPSD-201ENST00000294129 ALX1Q15699 326 aa18.29■□□□□ 0.52
NCKIPSD-201ENST00000294129 RTN1Q16799 776 aa18.29■□□□□ 0.52
NCKIPSD-201ENST00000294129 AXDND1Q5T1B0 1012 aaPredicted RBP18.29■□□□□ 0.52
NCKIPSD-201ENST00000294129 C8orf37Q96NL8 207 aa18.29■□□□□ 0.52
NCKIPSD-201ENST00000294129 UBAC1Q9BSL1 405 aa18.29■□□□□ 0.52
NCKIPSD-201ENST00000294129 CNNM2Q9H8M5 875 aa18.29■□□□□ 0.52
NCKIPSD-201ENST00000294129 SRP68Q9UHB9 627 aaKnown RBP18.29■□□□□ 0.52
NCKIPSD-201ENST00000294129 BAZ2BQ9UIF8 2168 aaKnown RBP18.29■□□□□ 0.52
NCKIPSD-201ENST00000294129 BTBD18B2RXH4 712 aa18.29■□□□□ 0.52
NCKIPSD-201ENST00000294129 C4AP0C0L4 1744 aa18.29■□□□□ 0.52
NCKIPSD-201ENST00000294129 C4BP0C0L5 1744 aa18.29■□□□□ 0.52
NCKIPSD-201ENST00000294129 THRAP3Q9Y2W1 955 aaKnown RBP18.29■□□□□ 0.52
NCKIPSD-201ENST00000294129 MAGEB6P1A0A0J9YX57 407 aa18.28■□□□□ 0.52
NCKIPSD-201ENST00000294129 SYKP43405 635 aa18.28■□□□□ 0.52
NCKIPSD-201ENST00000294129 PPARAQ07869 468 aa18.28■□□□□ 0.52
NCKIPSD-201ENST00000294129 SGMS1Q86VZ5 419 aa18.28■□□□□ 0.52
NCKIPSD-201ENST00000294129 TFCP2L1Q9NZI6 479 aa18.28■□□□□ 0.52
NCKIPSD-201ENST00000294129 NPHP1O15259 732 aa18.28■□□□□ 0.52
NCKIPSD-201ENST00000294129 CAVIN2O95810 425 aa18.28■□□□□ 0.52
NCKIPSD-201ENST00000294129 SLC39A14Q15043 492 aa18.28■□□□□ 0.52
NCKIPSD-201ENST00000294129 TBC1D9BQ66K14 1250 aa18.28■□□□□ 0.52
NCKIPSD-201ENST00000294129 NAT10Q9H0A0 1025 aaKnown RBP18.28■□□□□ 0.52
NCKIPSD-201ENST00000294129 PLCH1Q4KWH8 1693 aa18.28■□□□□ 0.52
NCKIPSD-201ENST00000294129 CHAF1AQ13111 956 aaPredicted RBP18.27■□□□□ 0.52
NCKIPSD-201ENST00000294129 SMC2O95347 1197 aa18.27■□□□□ 0.52
NCKIPSD-201ENST00000294129 LIFRP42702 1097 aa18.27■□□□□ 0.52
NCKIPSD-201ENST00000294129 CHD4Q14839 1912 aa18.27■□□□□ 0.52
NCKIPSD-201ENST00000294129 EVX2Q03828 476 aa18.27■□□□□ 0.51
NCKIPSD-201ENST00000294129 CAVIN4Q5BKX8 364 aa18.27■□□□□ 0.51
NCKIPSD-201ENST00000294129 TRIM22Q8IYM9 498 aa18.27■□□□□ 0.51
NCKIPSD-201ENST00000294129 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.27■□□□□ 0.51
NCKIPSD-201ENST00000294129 GNL3LQ9NVN8 582 aaKnown RBP18.27■□□□□ 0.51
NCKIPSD-201ENST00000294129 DDX60Q8IY21 1712 aaKnown RBP18.26■□□□□ 0.51
NCKIPSD-201ENST00000294129 GNAT2P19087 354 aa18.26■□□□□ 0.51
NCKIPSD-201ENST00000294129 CMA1P23946 247 aa18.26■□□□□ 0.51
NCKIPSD-201ENST00000294129 NR5A1Q13285 461 aa18.26■□□□□ 0.51
NCKIPSD-201ENST00000294129 SHC4Q6S5L8 630 aa18.26■□□□□ 0.51
NCKIPSD-201ENST00000294129 DIS3L2Q8IYB7 885 aaKnown RBP18.26■□□□□ 0.51
NCKIPSD-201ENST00000294129 STAG1Q8WVM7 1258 aa18.26■□□□□ 0.51
NCKIPSD-201ENST00000294129 LRP5O75197 1615 aa18.26■□□□□ 0.51
NCKIPSD-201ENST00000294129 PNOCQ13519 176 aa18.26■□□□□ 0.51
NCKIPSD-201ENST00000294129 SMARCC1Q92922 1105 aaPredicted RBP18.26■□□□□ 0.51
NCKIPSD-201ENST00000294129 MINPP1Q9UNW1 487 aa18.26■□□□□ 0.51
NCKIPSD-201ENST00000294129 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.25■□□□□ 0.51
NCKIPSD-201ENST00000294129 NGLY1Q96IV0 654 aa18.25■□□□□ 0.51
NCKIPSD-201ENST00000294129 SAFBQ15424 915 aaKnown RBP eCLIP18.25■□□□□ 0.51
NCKIPSD-201ENST00000294129 ZNF654Q8IZM8 581 aa18.25■□□□□ 0.51
NCKIPSD-201ENST00000294129 MYRIPQ8NFW9 859 aa18.25■□□□□ 0.51
NCKIPSD-201ENST00000294129 TNKSO95271 1327 aa18.24■□□□□ 0.51
NCKIPSD-201ENST00000294129 FMNL1O95466 1100 aaPredicted RBP18.24■□□□□ 0.51
NCKIPSD-201ENST00000294129 LMOD1P29536 600 aaPredicted RBP18.24■□□□□ 0.51
NCKIPSD-201ENST00000294129 SLC51AQ86UW1 340 aa18.24■□□□□ 0.51
NCKIPSD-201ENST00000294129 ZNF592Q92610 1267 aa18.24■□□□□ 0.51
NCKIPSD-201ENST00000294129 PHLPP1O60346 1717 aa18.24■□□□□ 0.51
NCKIPSD-201ENST00000294129 PNPLA7Q6ZV29 1317 aa18.24■□□□□ 0.51
NCKIPSD-201ENST00000294129 WNK3Q9BYP7 1800 aa18.24■□□□□ 0.51
NCKIPSD-201ENST00000294129 DYNC1I1O14576 645 aa18.24■□□□□ 0.51
NCKIPSD-201ENST00000294129 GRIN1Q05586 938 aa18.24■□□□□ 0.51
NCKIPSD-201ENST00000294129 PTPAQ15257 358 aa18.24■□□□□ 0.51
NCKIPSD-201ENST00000294129 HSP90AA4PQ58FG1 418 aa18.24■□□□□ 0.51
NCKIPSD-201ENST00000294129 JMYQ8N9B5 988 aa18.24■□□□□ 0.51
NCKIPSD-201ENST00000294129 FAM84BQ96KN1 310 aaPredicted RBP18.24■□□□□ 0.51
NCKIPSD-201ENST00000294129 BAZ2AQ9UIF9 1905 aaKnown RBP18.23■□□□□ 0.51
NCKIPSD-201ENST00000294129 IFNAR1P17181 557 aa18.23■□□□□ 0.51
NCKIPSD-201ENST00000294129 PTPN21Q16825 1174 aa18.23■□□□□ 0.51
NCKIPSD-201ENST00000294129 TPD52L1Q16890 204 aaPredicted RBP18.23■□□□□ 0.51
NCKIPSD-201ENST00000294129 NBPF5PQ86XG9 351 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms