RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 NFXL1Q6ZNB6 911 aa17.49■□□□□ 0.39
CCDC116-201ENST00000292779 CACTINQ8WUQ7 758 aaKnown RBP17.49■□□□□ 0.39
CCDC116-201ENST00000292779 MRFAP1L1Q96HT8 127 aa17.49■□□□□ 0.39
CCDC116-201ENST00000292779 NAPBQ9H115 298 aa17.49■□□□□ 0.39
CCDC116-201ENST00000292779 ARMT1Q9H993 441 aa17.49■□□□□ 0.39
CCDC116-201ENST00000292779 TAOK2Q9UL54 1235 aa17.49■□□□□ 0.39
CCDC116-201ENST00000292779 BCAMP50895 628 aa17.49■□□□□ 0.39
CCDC116-201ENST00000292779 TMEM67Q5HYA8 995 aa17.49■□□□□ 0.39
CCDC116-201ENST00000292779 AXDND1Q5T1B0 1012 aaPredicted RBP17.49■□□□□ 0.39
CCDC116-201ENST00000292779 KRT40Q6A162 431 aa17.49■□□□□ 0.39
CCDC116-201ENST00000292779 AOPEPQ8N6M6 819 aa17.49■□□□□ 0.39
CCDC116-201ENST00000292779 RGS22Q8NE09 1264 aa17.49■□□□□ 0.39
CCDC116-201ENST00000292779 MYL10Q9BUA6 226 aa17.49■□□□□ 0.39
CCDC116-201ENST00000292779 KIAA1468Q9P260 1216 aa17.49■□□□□ 0.39
CCDC116-201ENST00000292779 SRP68Q9UHB9 627 aaKnown RBP17.49■□□□□ 0.39
CCDC116-201ENST00000292779 CNTNAP4Q9C0A0 1308 aa17.48■□□□□ 0.39
CCDC116-201ENST00000292779 GTF2F1P35269 517 aaKnown RBP eCLIP17.48■□□□□ 0.39
CCDC116-201ENST00000292779 IGHMBP2P38935 993 aaKnown RBP17.48■□□□□ 0.39
CCDC116-201ENST00000292779 CPLX2Q6PUV4 134 aaKnown RBP17.48■□□□□ 0.39
CCDC116-201ENST00000292779 VPS37DQ86XT2 251 aa17.48■□□□□ 0.39
CCDC116-201ENST00000292779 NAT10Q9H0A0 1025 aaKnown RBP17.48■□□□□ 0.39
CCDC116-201ENST00000292779 ZSWIM5Q9P217 1185 aa17.48■□□□□ 0.39
CCDC116-201ENST00000292779 TACC3Q9Y6A5 838 aa17.48■□□□□ 0.39
CCDC116-201ENST00000292779 GNPATO15228 680 aa17.47■□□□□ 0.39
CCDC116-201ENST00000292779 NTRK3Q16288 839 aa17.47■□□□□ 0.39
CCDC116-201ENST00000292779 SGMS1Q86VZ5 419 aa17.47■□□□□ 0.39
CCDC116-201ENST00000292779 FAM217BQ9NTX9 383 aaPredicted RBP17.47■□□□□ 0.39
CCDC116-201ENST00000292779 GOLGA8AA7E2F4 631 aa17.47■□□□□ 0.39
CCDC116-201ENST00000292779 GSG1L2A8MUP6 293 aa17.47■□□□□ 0.39
CCDC116-201ENST00000292779 RANBP6O60518 1105 aaKnown RBP17.47■□□□□ 0.39
CCDC116-201ENST00000292779 WDHD1O75717 1129 aaPredicted RBP17.47■□□□□ 0.39
CCDC116-201ENST00000292779 ZNF202O95125 648 aa17.47■□□□□ 0.39
CCDC116-201ENST00000292779 MARCKSP29966 332 aaPredicted RBP17.47■□□□□ 0.39
CCDC116-201ENST00000292779 SLC39A14Q15043 492 aa17.47■□□□□ 0.39
CCDC116-201ENST00000292779 TSC1Q92574 1164 aa17.47■□□□□ 0.39
CCDC116-201ENST00000292779 BCL2L12Q9HB09 334 aa17.47■□□□□ 0.39
CCDC116-201ENST00000292779 PRKAB2O43741 272 aa17.46■□□□□ 0.39
CCDC116-201ENST00000292779 PFKFB1P16118 471 aa17.46■□□□□ 0.39
CCDC116-201ENST00000292779 CMA1P23946 247 aa17.46■□□□□ 0.39
CCDC116-201ENST00000292779 IARSP41252 1262 aaKnown RBP17.46■□□□□ 0.39
CCDC116-201ENST00000292779 DPCR1Q3MIW9 517 aa17.46■□□□□ 0.39
CCDC116-201ENST00000292779 MAP7D2Q96T17 732 aa17.46■□□□□ 0.39
CCDC116-201ENST00000292779 MROH7-TTC4A0A0A0MT08 1334 aa17.46■□□□□ 0.39
CCDC116-201ENST00000292779 UBR3Q6ZT12 1888 aa17.46■□□□□ 0.39
CCDC116-201ENST00000292779 IFIT3O14879 490 aaKnown RBP17.46■□□□□ 0.39
CCDC116-201ENST00000292779 CHRNDQ07001 517 aa17.46■□□□□ 0.39
CCDC116-201ENST00000292779 CHAF1AQ13111 956 aaPredicted RBP17.46■□□□□ 0.39
CCDC116-201ENST00000292779 TIAM2Q8IVF5 1701 aa17.46■□□□□ 0.38
CCDC116-201ENST00000292779 TNS1Q9HBL0 1735 aaKnown RBP17.46■□□□□ 0.38
CCDC116-201ENST00000292779 SLC3A2P08195 630 aaKnown RBP17.45■□□□□ 0.38
CCDC116-201ENST00000292779 LIFRP42702 1097 aa17.45■□□□□ 0.38
CCDC116-201ENST00000292779 GNL2Q13823 731 aaKnown RBP17.45■□□□□ 0.38
CCDC116-201ENST00000292779 ZRSR1Q15695 479 aaKnown RBP17.45■□□□□ 0.38
CCDC116-201ENST00000292779 AKNAD1Q5T1N1 836 aa17.45■□□□□ 0.38
CCDC116-201ENST00000292779 LCORLQ8N3X6 602 aa17.45■□□□□ 0.38
CCDC116-201ENST00000292779 SLC12A7Q9Y666 1083 aa17.45■□□□□ 0.38
CCDC116-201ENST00000292779 UBE2Q2LH0YL09 131 aa17.45■□□□□ 0.38
CCDC116-201ENST00000292779 RPS6KA4O75676 772 aa17.45■□□□□ 0.38
CCDC116-201ENST00000292779 ARID5BQ14865 1188 aa17.45■□□□□ 0.38
CCDC116-201ENST00000292779 LRRC8AQ8IWT6 810 aa17.45■□□□□ 0.38
CCDC116-201ENST00000292779 UBE2Q2Q8WVN8 375 aa17.45■□□□□ 0.38
CCDC116-201ENST00000292779 CNNM2Q9H8M5 875 aa17.45■□□□□ 0.38
CCDC116-201ENST00000292779 LAMB2P55268 1798 aa17.44■□□□□ 0.38
CCDC116-201ENST00000292779 CCDC69A6NI79 296 aa17.44■□□□□ 0.38
CCDC116-201ENST00000292779 RC3H1Q5TC82 1133 aaKnown RBP17.44■□□□□ 0.38
CCDC116-201ENST00000292779 MFSD6Q6ZSS7 791 aa17.44■□□□□ 0.38
CCDC116-201ENST00000292779 SLC4A4Q9Y6R1 1079 aa17.44■□□□□ 0.38
CCDC116-201ENST00000292779 RTL9Q8NET4 1388 aa17.44■□□□□ 0.38
CCDC116-201ENST00000292779 BIN1O00499 593 aa17.44■□□□□ 0.38
CCDC116-201ENST00000292779 TDO2P48775 406 aa17.44■□□□□ 0.38
CCDC116-201ENST00000292779 SCN7AQ01118 1682 aa17.44■□□□□ 0.38
CCDC116-201ENST00000292779 TRIM29Q14134 588 aa17.44■□□□□ 0.38
CCDC116-201ENST00000292779 PTPAQ15257 358 aa17.44■□□□□ 0.38
CCDC116-201ENST00000292779 ARHGEF1Q92888 912 aaKnown RBP17.44■□□□□ 0.38
CCDC116-201ENST00000292779 SLC26A6Q9BXS9 759 aa17.44■□□□□ 0.38
CCDC116-201ENST00000292779 KRT23Q9C075 422 aa17.44■□□□□ 0.38
CCDC116-201ENST00000292779 RIOK3O14730 519 aaKnown RBP17.43■□□□□ 0.38
CCDC116-201ENST00000292779 U2AF2P26368 475 aaKnown RBP eCLIP17.43■□□□□ 0.38
CCDC116-201ENST00000292779 TXNRD1Q16881 649 aa17.43■□□□□ 0.38
CCDC116-201ENST00000292779 RRP12Q5JTH9 1297 aaKnown RBP17.43■□□□□ 0.38
CCDC116-201ENST00000292779 C16orf45Q96MC5 204 aaPredicted RBP17.43■□□□□ 0.38
CCDC116-201ENST00000292779 MAP3K14Q99558 947 aa17.43■□□□□ 0.38
CCDC116-201ENST00000292779 IQSEC3Q9UPP2 1182 aaPredicted RBP17.43■□□□□ 0.38
CCDC116-201ENST00000292779 COL4A1P02462 1669 aa17.43■□□□□ 0.38
CCDC116-201ENST00000292779 PNPLA7Q6ZV29 1317 aa17.42■□□□□ 0.38
CCDC116-201ENST00000292779 PPP6R2O75170 966 aa17.42■□□□□ 0.38
CCDC116-201ENST00000292779 GNAT2P19087 354 aa17.42■□□□□ 0.38
CCDC116-201ENST00000292779 SSRP1Q08945 709 aaKnown RBP17.42■□□□□ 0.38
CCDC116-201ENST00000292779 MIGA1Q8NAN2 632 aa17.42■□□□□ 0.38
CCDC116-201ENST00000292779 BPIFA3Q9BQP9 254 aa17.42■□□□□ 0.38
CCDC116-201ENST00000292779 ZKSCAN3Q9BRR0 538 aa17.42■□□□□ 0.38
CCDC116-201ENST00000292779 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.42■□□□□ 0.38
CCDC116-201ENST00000292779 NACAP1Q9BZK3 213 aa17.42■□□□□ 0.38
CCDC116-201ENST00000292779 TOMM22Q9NS69 142 aa17.42■□□□□ 0.38
CCDC116-201ENST00000292779 LRP2BPQ9P2M1 347 aa17.42■□□□□ 0.38
CCDC116-201ENST00000292779 ZNF652Q9Y2D9 606 aa17.42■□□□□ 0.38
CCDC116-201ENST00000292779 STK36Q9NRP7 1315 aa17.42■□□□□ 0.38
CCDC116-201ENST00000292779 APBA3O96018 575 aa17.42■□□□□ 0.38
CCDC116-201ENST00000292779 NLRP12P59046 1061 aa17.42■□□□□ 0.38
CCDC116-201ENST00000292779 SHC4Q6S5L8 630 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms