RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 FAM43AQ8N2R8 423 aa12.86□□□□□ -0.35
SNF8-201ENST00000290330 DDX4Q9NQI0 724 aaKnown RBP12.86□□□□□ -0.35
SNF8-201ENST00000290330 RAI14Q9P0K7 980 aa12.86□□□□□ -0.35
SNF8-201ENST00000290330 DDTLA6NHG4 134 aaPredicted RBP12.85□□□□□ -0.35
SNF8-201ENST00000290330 PHF20L1A8MW92 1017 aa12.85□□□□□ -0.35
SNF8-201ENST00000290330 MS4A1P11836 297 aa12.85□□□□□ -0.35
SNF8-201ENST00000290330 GSTO1P78417 241 aa12.85□□□□□ -0.35
SNF8-201ENST00000290330 MAP3K10Q02779 954 aa12.85□□□□□ -0.35
SNF8-201ENST00000290330 MLLT1Q03111 559 aaPredicted RBP12.85□□□□□ -0.35
SNF8-201ENST00000290330 SNAPC2Q13487 334 aa12.85□□□□□ -0.35
SNF8-201ENST00000290330 PICALMQ13492 652 aa12.85□□□□□ -0.35
SNF8-201ENST00000290330 TAF1CQ15572 869 aaPredicted RBP12.85□□□□□ -0.35
SNF8-201ENST00000290330 TTC39AQ5SRH9 613 aa12.85□□□□□ -0.35
SNF8-201ENST00000290330 NOL9Q5SY16 702 aaKnown RBP12.85□□□□□ -0.35
SNF8-201ENST00000290330 ZSCAN29Q8IWY8 852 aaPredicted RBP12.85□□□□□ -0.35
SNF8-201ENST00000290330 EAF2Q96CJ1 260 aaPredicted RBP12.85□□□□□ -0.35
SNF8-201ENST00000290330 ZNF512BQ96KM6 892 aaPredicted RBP12.85□□□□□ -0.35
SNF8-201ENST00000290330 SNRKQ9NRH2 765 aa12.85□□□□□ -0.35
SNF8-201ENST00000290330 LRP2BPQ9P2M1 347 aa12.85□□□□□ -0.35
SNF8-201ENST00000290330 DBNLQ9UJU6 430 aaKnown RBP12.85□□□□□ -0.35
SNF8-201ENST00000290330 MYH2Q9UKX2 1941 aa12.85□□□□□ -0.35
SNF8-201ENST00000290330 BTBD19C9JJ37 291 aa12.84□□□□□ -0.35
SNF8-201ENST00000290330 NPM3O75607 178 aaKnown RBP12.84□□□□□ -0.35
SNF8-201ENST00000290330 MAP4K4O95819 1239 aaPredicted RBP12.84□□□□□ -0.35
SNF8-201ENST00000290330 SP3Q02447 781 aa12.84□□□□□ -0.35
SNF8-201ENST00000290330 C1QBPQ07021 282 aaKnown RBP12.84□□□□□ -0.35
SNF8-201ENST00000290330 OTOP1Q7RTM1 612 aa12.84□□□□□ -0.35
SNF8-201ENST00000290330 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.84□□□□□ -0.35
SNF8-201ENST00000290330 ERO1AQ96HE7 468 aa12.84□□□□□ -0.35
SNF8-201ENST00000290330 CCDC8Q9H0W5 538 aaPredicted RBP12.84□□□□□ -0.35
SNF8-201ENST00000290330 ZFYVE28Q9HCC9 887 aa12.84□□□□□ -0.35
SNF8-201ENST00000290330 TLR7Q9NYK1 1049 aaKnown RBP12.84□□□□□ -0.35
SNF8-201ENST00000290330 KCNH4Q9UQ05 1017 aa12.84□□□□□ -0.35
SNF8-201ENST00000290330 TRIM17Q9Y577 477 aa12.84□□□□□ -0.35
SNF8-201ENST00000290330 CYP2E1P05181 493 aaPredicted RBP12.83□□□□□ -0.36
SNF8-201ENST00000290330 SLURP2P0DP57 97 aa12.83□□□□□ -0.36
SNF8-201ENST00000290330 SOX10P56693 466 aa12.83□□□□□ -0.36
SNF8-201ENST00000290330 CD99L2Q8TCZ2 262 aa12.83□□□□□ -0.36
SNF8-201ENST00000290330 ZCCHC17Q9NP64 241 aaKnown RBP12.83□□□□□ -0.36
SNF8-201ENST00000290330 RCAN3Q9UKA8 241 aa12.83□□□□□ -0.36
SNF8-201ENST00000290330 DDX19BQ9UMR2 479 aa12.83□□□□□ -0.36
SNF8-201ENST00000290330 EXOC6BQ9Y2D4 811 aa12.83□□□□□ -0.36
SNF8-201ENST00000290330 COG6Q9Y2V7 657 aa12.83□□□□□ -0.36
SNF8-201ENST00000290330 TLR2O60603 784 aa12.82□□□□□ -0.36
SNF8-201ENST00000290330 ZAP70P43403 619 aa12.82□□□□□ -0.36
SNF8-201ENST00000290330 CAP1Q01518 475 aa12.82□□□□□ -0.36
SNF8-201ENST00000290330 NAA16Q6N069 864 aaPredicted RBP12.82□□□□□ -0.36
SNF8-201ENST00000290330 ERC1Q8IUD2 1116 aa12.82□□□□□ -0.36
SNF8-201ENST00000290330 RPAP2Q8IXW5 612 aaPredicted RBP12.82□□□□□ -0.36
SNF8-201ENST00000290330 SCYL3Q8IZE3 742 aa12.82□□□□□ -0.36
SNF8-201ENST00000290330 ZBTB40Q9NUA8 1239 aa12.82□□□□□ -0.36
SNF8-201ENST00000290330 TBC1D12O60347 775 aa12.81□□□□□ -0.36
SNF8-201ENST00000290330 IGSF3O75054 1194 aa12.81□□□□□ -0.36
SNF8-201ENST00000290330 PTPRAP18433 802 aa12.81□□□□□ -0.36
SNF8-201ENST00000290330 MOGSQ13724 837 aa12.81□□□□□ -0.36
SNF8-201ENST00000290330 HSP90AB4PQ58FF6 505 aa12.81□□□□□ -0.36
SNF8-201ENST00000290330 ANKRD23Q86SG2 305 aa12.81□□□□□ -0.36
SNF8-201ENST00000290330 SH3RF3Q8TEJ3 882 aaPredicted RBP12.81□□□□□ -0.36
SNF8-201ENST00000290330 OSBPL5Q9H0X9 879 aaPredicted RBP12.81□□□□□ -0.36
SNF8-201ENST00000290330 EFCC1Q9HA90 598 aa12.81□□□□□ -0.36
SNF8-201ENST00000290330 PIH1D3Q9NQM4 214 aaKnown RBP12.81□□□□□ -0.36
SNF8-201ENST00000290330 PTPN22Q9Y2R2 807 aa12.81□□□□□ -0.36
SNF8-201ENST00000290330 AK9Q5TCS8 1911 aa12.8□□□□□ -0.36
SNF8-201ENST00000290330 CXCL11O14625 94 aa12.8□□□□□ -0.36
SNF8-201ENST00000290330 CTNND1O60716 968 aaKnown RBP12.8□□□□□ -0.36
SNF8-201ENST00000290330 BAG3O95817 575 aa12.8□□□□□ -0.36
SNF8-201ENST00000290330 PPP4CP60510 307 aa12.8□□□□□ -0.36
SNF8-201ENST00000290330 ADGRA1Q86SQ6 560 aa12.8□□□□□ -0.36
SNF8-201ENST00000290330 AACSQ86V21 672 aa12.8□□□□□ -0.36
SNF8-201ENST00000290330 SIRT2Q8IXJ6 389 aa12.8□□□□□ -0.36
SNF8-201ENST00000290330 TEX11Q8IYF3 940 aa12.8□□□□□ -0.36
SNF8-201ENST00000290330 RHPN1Q8TCX5 695 aa12.8□□□□□ -0.36
SNF8-201ENST00000290330 NOL10Q9BSC4 688 aaKnown RBP12.8□□□□□ -0.36
SNF8-201ENST00000290330 IL1RAPL2Q9NP60 686 aa12.8□□□□□ -0.36
SNF8-201ENST00000290330 PICK1Q9NRD5 415 aa12.8□□□□□ -0.36
SNF8-201ENST00000290330 AATFQ9NY61 560 aaKnown RBP eCLIP12.8□□□□□ -0.368e-6■■■■□ 21.3
SNF8-201ENST00000290330 ZHX2Q9Y6X8 837 aa12.8□□□□□ -0.36
SNF8-201ENST00000290330 COL2A1P02458 1487 aaPredicted RBP12.79□□□□□ -0.36
SNF8-201ENST00000290330 FAM196BA6NMK8 535 aa12.79□□□□□ -0.36
SNF8-201ENST00000290330 PDHXO00330 501 aa12.79□□□□□ -0.36
SNF8-201ENST00000290330 PLCG2P16885 1265 aa12.79□□□□□ -0.36
SNF8-201ENST00000290330 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.79□□□□□ -0.36
SNF8-201ENST00000290330 AFG3L2Q9Y4W6 797 aa12.79□□□□□ -0.36
SNF8-201ENST00000290330 DOCK2Q92608 1830 aa12.78□□□□□ -0.36
SNF8-201ENST00000290330 HMMRO75330 724 aa12.78□□□□□ -0.36
SNF8-201ENST00000290330 LACTBP83111 547 aaPredicted RBP12.78□□□□□ -0.36
SNF8-201ENST00000290330 ARHGEF6Q15052 776 aa12.78□□□□□ -0.36
SNF8-201ENST00000290330 C20orf194Q5TEA3 1177 aa12.78□□□□□ -0.36
SNF8-201ENST00000290330 GPAT2Q6NUI2 795 aa12.78□□□□□ -0.36
SNF8-201ENST00000290330 C17orf99Q6UX52 265 aa12.78□□□□□ -0.36
SNF8-201ENST00000290330 CHMP4BQ9H444 224 aaKnown RBP12.78□□□□□ -0.36
SNF8-201ENST00000290330 ANTXR1Q9H6X2 564 aa12.78□□□□□ -0.36
SNF8-201ENST00000290330 GTF3C3Q9Y5Q9 886 aa12.78□□□□□ -0.36
SNF8-201ENST00000290330 NDUFB9Q9Y6M9 179 aa12.78□□□□□ -0.36
SNF8-201ENST00000290330 A0A0G2JLL6 359 aaPredicted RBP12.77□□□□□ -0.37
SNF8-201ENST00000290330 APBB1O00213 710 aa12.77□□□□□ -0.37
SNF8-201ENST00000290330 IDH1O75874 414 aaKnown RBP12.77□□□□□ -0.37
SNF8-201ENST00000290330 CYP7A1P22680 504 aa12.77□□□□□ -0.37
SNF8-201ENST00000290330 PDE3AQ14432 1141 aa12.77□□□□□ -0.37
SNF8-201ENST00000290330 FASTKD5Q7L8L6 764 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms