RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 PTPN21Q16825 1174 aa23.37■■□□□ 1.33
TMED4-201ENST00000289577 NT5DC1Q5TFE4 455 aa23.37■■□□□ 1.33
TMED4-201ENST00000289577 SGMS1Q86VZ5 419 aa23.37■■□□□ 1.33
TMED4-201ENST00000289577 KRI1Q8N9T8 703 aaKnown RBP23.37■■□□□ 1.33
TMED4-201ENST00000289577 TC2NQ8N9U0 490 aa23.37■■□□□ 1.33
TMED4-201ENST00000289577 WDR24Q96S15 920 aa23.37■■□□□ 1.33
TMED4-201ENST00000289577 RIC1Q4ADV7 1423 aa23.37■■□□□ 1.33
TMED4-201ENST00000289577 UBN2Q6ZU65 1347 aa23.37■■□□□ 1.33
TMED4-201ENST00000289577 STK36Q9NRP7 1315 aa23.37■■□□□ 1.33
TMED4-201ENST00000289577 ZBTB43O43298 467 aa23.37■■□□□ 1.33
TMED4-201ENST00000289577 CASQ1P31415 396 aa23.37■■□□□ 1.33
TMED4-201ENST00000289577 TRIM28Q13263 835 aaKnown RBP23.37■■□□□ 1.33
TMED4-201ENST00000289577 TCIRG1Q13488 830 aa23.37■■□□□ 1.33
TMED4-201ENST00000289577 TRIM29Q14134 588 aa23.37■■□□□ 1.33
TMED4-201ENST00000289577 GPR161Q8N6U8 529 aaKnown RBP23.37■■□□□ 1.33
TMED4-201ENST00000289577 ZNF512BQ96KM6 892 aaPredicted RBP23.37■■□□□ 1.33
TMED4-201ENST00000289577 MAN1B1Q9UKM7 699 aa23.37■■□□□ 1.33
TMED4-201ENST00000289577 MRFAP1Q9Y605 127 aa23.37■■□□□ 1.33
TMED4-201ENST00000289577 PAPPAQ13219 1627 aa23.37■■□□□ 1.33
TMED4-201ENST00000289577 CHRNA2Q15822 529 aa23.36■■□□□ 1.33
TMED4-201ENST00000289577 RSRC2Q7L4I2 434 aaKnown RBP23.36■■□□□ 1.33
TMED4-201ENST00000289577 HOOK1Q9UJC3 728 aaKnown RBP23.36■■□□□ 1.33
TMED4-201ENST00000289577 ERVV-2B6SEH9 535 aa23.36■■□□□ 1.33
TMED4-201ENST00000289577 FOXN1O15353 648 aa23.36■■□□□ 1.33
TMED4-201ENST00000289577 SPECC1LQ69YQ0 1117 aa23.36■■□□□ 1.33
TMED4-201ENST00000289577 MICU3Q86XE3 530 aa23.36■■□□□ 1.33
TMED4-201ENST00000289577 ENOX1Q8TC92 643 aaKnown RBP23.36■■□□□ 1.33
TMED4-201ENST00000289577 KIFC2Q96AC6 838 aa23.36■■□□□ 1.33
TMED4-201ENST00000289577 LY9Q9HBG7 655 aa23.36■■□□□ 1.33
TMED4-201ENST00000289577 SEC31AO94979 1220 aaKnown RBP23.35■■□□□ 1.33
TMED4-201ENST00000289577 TBC1D8O95759 1140 aa23.35■■□□□ 1.33
TMED4-201ENST00000289577 SARSP49591 514 aaKnown RBP23.35■■□□□ 1.33
TMED4-201ENST00000289577 GNG11P61952 73 aa23.35■■□□□ 1.33
TMED4-201ENST00000289577 UBE3CQ15386 1083 aa23.35■■□□□ 1.33
TMED4-201ENST00000289577 CC2D1AQ6P1N0 951 aaPredicted RBP23.35■■□□□ 1.33
TMED4-201ENST00000289577 STK11IPQ8N1F8 1099 aa23.35■■□□□ 1.33
TMED4-201ENST00000289577 B4E1Z4 1266 aa23.35■■□□□ 1.33
TMED4-201ENST00000289577 PROSER2Q86WR7 435 aaPredicted RBP23.35■■□□□ 1.33
TMED4-201ENST00000289577 MLKLQ8NB16 471 aa23.35■■□□□ 1.33
TMED4-201ENST00000289577 PCCAP05165 728 aaPredicted RBP23.34■■□□□ 1.33
TMED4-201ENST00000289577 FMR1Q06787 632 aaKnown RBP eCLIP23.34■■□□□ 1.33
TMED4-201ENST00000289577 IFIT5Q13325 482 aaKnown RBP23.34■■□□□ 1.33
TMED4-201ENST00000289577 POSTNQ15063 836 aa23.34■■□□□ 1.33
TMED4-201ENST00000289577 SLC9C2Q5TAH2 1124 aa23.34■■□□□ 1.33
TMED4-201ENST00000289577 TOGARAM2Q6ZUX3 1019 aa23.34■■□□□ 1.33
TMED4-201ENST00000289577 RIPOR2Q9Y4F9 1068 aa23.34■■□□□ 1.33
TMED4-201ENST00000289577 GOLGA8AA7E2F4 631 aa23.33■■□□□ 1.33
TMED4-201ENST00000289577 SASH3O75995 380 aa23.33■■□□□ 1.33
TMED4-201ENST00000289577 PPP2R3AQ06190 1150 aa23.33■■□□□ 1.33
TMED4-201ENST00000289577 MORC3Q14149 939 aa23.33■■□□□ 1.33
TMED4-201ENST00000289577 TAF7LQ5H9L4 462 aa23.33■■□□□ 1.33
TMED4-201ENST00000289577 NOSTRINQ8IVI9 506 aa23.33■■□□□ 1.33
TMED4-201ENST00000289577 NFE2L3Q9Y4A8 694 aa23.33■■□□□ 1.33
TMED4-201ENST00000289577 LIFRP42702 1097 aa23.33■■□□□ 1.33
TMED4-201ENST00000289577 TOB1P50616 345 aaPredicted RBP23.33■■□□□ 1.33
TMED4-201ENST00000289577 TTF1Q15361 905 aaPredicted RBP23.33■■□□□ 1.33
TMED4-201ENST00000289577 TEX35Q5T0J7 233 aa23.33■■□□□ 1.33
TMED4-201ENST00000289577 FAM177A1Q8N128 213 aaPredicted RBP23.33■■□□□ 1.33
TMED4-201ENST00000289577 CABLES1Q8TDN4 633 aa23.33■■□□□ 1.33
TMED4-201ENST00000289577 DACH1Q9UI36 760 aa23.33■■□□□ 1.33
TMED4-201ENST00000289577 FMNL1O95466 1100 aaPredicted RBP23.32■■□□□ 1.32
TMED4-201ENST00000289577 PTPREP23469 700 aa23.32■■□□□ 1.32
TMED4-201ENST00000289577 PDILTQ8N807 584 aa23.32■■□□□ 1.32
TMED4-201ENST00000289577 TRIML1Q8N9V2 468 aa23.32■■□□□ 1.32
TMED4-201ENST00000289577 RABGGTAQ92696 567 aa23.32■■□□□ 1.32
TMED4-201ENST00000289577 EPC1Q9H2F5 836 aa23.32■■□□□ 1.32
TMED4-201ENST00000289577 FBXO2Q9UK22 296 aaPredicted RBP23.32■■□□□ 1.32
TMED4-201ENST00000289577 LRP6O75581 1613 aa23.32■■□□□ 1.32
TMED4-201ENST00000289577 PCDH11XQ9BZA7 1347 aa23.32■■□□□ 1.32
TMED4-201ENST00000289577 PCDH11YQ9BZA8 1340 aa23.32■■□□□ 1.32
TMED4-201ENST00000289577 TNS2Q63HR2 1409 aa23.32■■□□□ 1.32
TMED4-201ENST00000289577 SSRP1Q08945 709 aaKnown RBP23.32■■□□□ 1.32
TMED4-201ENST00000289577 ALX1Q15699 326 aa23.32■■□□□ 1.32
TMED4-201ENST00000289577 PIH1D3Q9NQM4 214 aaKnown RBP23.32■■□□□ 1.32
TMED4-201ENST00000289577 NID2Q14112 1375 aa23.32■■□□□ 1.32
TMED4-201ENST00000289577 UBE2Q2LH0YL09 131 aa23.31■■□□□ 1.32
TMED4-201ENST00000289577 ADKP55263 362 aaKnown RBP23.31■■□□□ 1.32
TMED4-201ENST00000289577 TMEM67Q5HYA8 995 aa23.31■■□□□ 1.32
TMED4-201ENST00000289577 NFXL1Q6ZNB6 911 aa23.31■■□□□ 1.32
TMED4-201ENST00000289577 CCDC85AQ96PX6 553 aaPredicted RBP23.31■■□□□ 1.32
TMED4-201ENST00000289577 MED15Q96RN5 788 aa23.31■■□□□ 1.32
TMED4-201ENST00000289577 APPP05067 770 aa23.31■■□□□ 1.32
TMED4-201ENST00000289577 NR1I3Q14994 352 aa23.31■■□□□ 1.32
TMED4-201ENST00000289577 METTL24Q5JXM2 366 aa23.31■■□□□ 1.32
TMED4-201ENST00000289577 SPECC1Q5M775 1068 aa23.31■■□□□ 1.32
TMED4-201ENST00000289577 ZNF579Q8NAF0 562 aaKnown RBP23.31■■□□□ 1.32
TMED4-201ENST00000289577 WASF1Q92558 559 aa23.31■■□□□ 1.32
TMED4-201ENST00000289577 FAM89AQ96GI7 184 aa23.31■■□□□ 1.32
TMED4-201ENST00000289577 SLC26A6Q9BXS9 759 aa23.31■■□□□ 1.32
TMED4-201ENST00000289577 MMP1P03956 469 aa23.3■■□□□ 1.32
TMED4-201ENST00000289577 PRR29P0C7W0 189 aa23.3■■□□□ 1.32
TMED4-201ENST00000289577 CDK11BP21127 795 aaKnown RBP23.3■■□□□ 1.32
TMED4-201ENST00000289577 HSP90AA4PQ58FG1 418 aa23.3■■□□□ 1.32
TMED4-201ENST00000289577 NUTM2AQ8IVF1 878 aaPredicted RBP23.3■■□□□ 1.32
TMED4-201ENST00000289577 ZBTB38Q8NAP3 1195 aaPredicted RBP23.3■■□□□ 1.32
TMED4-201ENST00000289577 DDX17Q92841 729 aaKnown RBP23.3■■□□□ 1.32
TMED4-201ENST00000289577 MYL10Q9BUA6 226 aa23.3■■□□□ 1.32
TMED4-201ENST00000289577 ZNF532Q9HCE3 1301 aa23.3■■□□□ 1.32
TMED4-201ENST00000289577 TCRBV5S4A2TA0A5A2 114 aa23.29■■□□□ 1.32
TMED4-201ENST00000289577 IFNAR1P17181 557 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms