RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.24□□□□□ -0.13
SLC6A1-201ENST00000287766 KIAA1468Q9P260 1216 aa14.24□□□□□ -0.13
SLC6A1-201ENST00000287766 V9GY48 417 aaPredicted RBP14.24□□□□□ -0.13
SLC6A1-201ENST00000287766 ELP1O95163 1332 aa14.24□□□□□ -0.13
SLC6A1-201ENST00000287766 CCT6AP40227 531 aaKnown RBP14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 RBM5P52756 815 aaKnown RBP eCLIP14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 GOLGA8FQ08AF8 430 aa14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 GOLGA8DPQ0D2H9 430 aa14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 ZSCAN29Q8IWY8 852 aaPredicted RBP14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 PGBD1Q96JS3 809 aa14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 RABEP2Q9H5N1 569 aa14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 KAT14Q9H8E8 782 aa14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 MPHOSPH10O00566 681 aaKnown RBP14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 PHKA1P46020 1223 aa14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 UBE4AQ14139 1066 aa14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 CCDC178Q5BJE1 867 aa14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 ZMYM1Q5SVZ6 1142 aa14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 KIAA1524Q8TCG1 905 aa14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 YEATS4O95619 227 aa14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 DPCR1Q3MIW9 517 aa14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 ADALQ6DHV7 355 aa14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 GPIHBP1Q8IV16 184 aa14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 PUS7LQ9H0K6 701 aaKnown RBP14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 MAP2P11137 1827 aaKnown RBP14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 EZRP15311 586 aaKnown RBP14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 ZNF274Q96GC6 653 aaPredicted RBP14.23□□□□□ -0.13
SLC6A1-201ENST00000287766 MTX1Q13505 466 aa14.22□□□□□ -0.13
SLC6A1-201ENST00000287766 TDRD12Q587J7 1177 aaKnown RBP14.22□□□□□ -0.13
SLC6A1-201ENST00000287766 CCDC91Q7Z6B0 441 aa14.22□□□□□ -0.13
SLC6A1-201ENST00000287766 NCOA3Q9Y6Q9 1424 aa14.22□□□□□ -0.13
SLC6A1-201ENST00000287766 ATL3Q6DD88 541 aa14.22□□□□□ -0.13
SLC6A1-201ENST00000287766 SCLT1Q96NL6 688 aa14.22□□□□□ -0.13
SLC6A1-201ENST00000287766 ZNF215Q9UL58 517 aaPredicted RBP14.22□□□□□ -0.13
SLC6A1-201ENST00000287766 BTBD18B2RXH4 712 aa14.22□□□□□ -0.13
SLC6A1-201ENST00000287766 USO1O60763 962 aaKnown RBP14.22□□□□□ -0.13
SLC6A1-201ENST00000287766 EVCP57679 992 aa14.22□□□□□ -0.13
SLC6A1-201ENST00000287766 RESTQ13127 1097 aa14.22□□□□□ -0.13
SLC6A1-201ENST00000287766 CACNA2D4Q7Z3S7 1137 aa14.22□□□□□ -0.13
SLC6A1-201ENST00000287766 NBPF5PQ86XG9 351 aaPredicted RBP14.22□□□□□ -0.13
SLC6A1-201ENST00000287766 NFE2L3Q9Y4A8 694 aa14.22□□□□□ -0.13
SLC6A1-201ENST00000287766 MTIF2P46199 727 aaKnown RBP14.22□□□□□ -0.13
SLC6A1-201ENST00000287766 PUM3Q15397 648 aaKnown RBP14.22□□□□□ -0.13
SLC6A1-201ENST00000287766 HEATR3Q7Z4Q2 680 aa14.22□□□□□ -0.13
SLC6A1-201ENST00000287766 FBXO18Q8NFZ0 1043 aa14.22□□□□□ -0.13
SLC6A1-201ENST00000287766 ERO1AQ96HE7 468 aa14.22□□□□□ -0.13
SLC6A1-201ENST00000287766 RPAP1Q9BWH6 1393 aaPredicted RBP14.21□□□□□ -0.13
SLC6A1-201ENST00000287766 SH3TC1Q8TE82 1336 aa14.21□□□□□ -0.13
SLC6A1-201ENST00000287766 VWDEQ8N2E2 1590 aa14.21□□□□□ -0.13
SLC6A1-201ENST00000287766 NAA25Q14CX7 972 aa14.21□□□□□ -0.13
SLC6A1-201ENST00000287766 SDR42E1Q8WUS8 393 aa14.21□□□□□ -0.13
SLC6A1-201ENST00000287766 TRIM47Q96LD4 638 aa14.21□□□□□ -0.13
SLC6A1-201ENST00000287766 VPS54Q9P1Q0 977 aa14.21□□□□□ -0.13
SLC6A1-201ENST00000287766 SEC63Q9UGP8 760 aaKnown RBP14.21□□□□□ -0.13
SLC6A1-201ENST00000287766 PDE6AP16499 860 aa14.21□□□□□ -0.13
SLC6A1-201ENST00000287766 PDE4BQ07343 736 aa14.21□□□□□ -0.13
SLC6A1-201ENST00000287766 SMC1AQ14683 1233 aaKnown RBP14.21□□□□□ -0.13
SLC6A1-201ENST00000287766 DDB1Q16531 1140 aa14.21□□□□□ -0.13
SLC6A1-201ENST00000287766 LRRC8AQ8IWT6 810 aa14.21□□□□□ -0.13
SLC6A1-201ENST00000287766 TMTC2Q8N394 836 aa14.21□□□□□ -0.13
SLC6A1-201ENST00000287766 MCM9Q9NXL9 1143 aa14.21□□□□□ -0.13
SLC6A1-201ENST00000287766 USP31Q70CQ4 1352 aa14.21□□□□□ -0.13
SLC6A1-201ENST00000287766 KANK3Q6NY19 840 aa14.21□□□□□ -0.14
SLC6A1-201ENST00000287766 SPATA5Q8NB90 893 aa14.21□□□□□ -0.14
SLC6A1-201ENST00000287766 GOLGA1Q92805 767 aa14.21□□□□□ -0.14
SLC6A1-201ENST00000287766 OVOS2A0A0J9YW53 1432 aa14.21□□□□□ -0.14
SLC6A1-201ENST00000287766 OVOS2Q6IE36 1432 aa14.21□□□□□ -0.14
SLC6A1-201ENST00000287766 NLRP12P59046 1061 aa14.2□□□□□ -0.14
SLC6A1-201ENST00000287766 CARD6Q9BX69 1037 aa14.2□□□□□ -0.14
SLC6A1-201ENST00000287766 PDE8AO60658 829 aa14.2□□□□□ -0.14
SLC6A1-201ENST00000287766 BCAMP50895 628 aa14.2□□□□□ -0.14
SLC6A1-201ENST00000287766 ADKP55263 362 aaKnown RBP14.2□□□□□ -0.14
SLC6A1-201ENST00000287766 BAG1Q99933 345 aaPredicted RBP14.2□□□□□ -0.14
SLC6A1-201ENST00000287766 CRNKL1Q9BZJ0 848 aaKnown RBP14.2□□□□□ -0.14
SLC6A1-201ENST00000287766 COBLO75128 1261 aa14.2□□□□□ -0.14
SLC6A1-201ENST00000287766 TMEM87AQ8NBN3 555 aa14.2□□□□□ -0.14
SLC6A1-201ENST00000287766 TMEM87BQ96K49 555 aa14.2□□□□□ -0.14
SLC6A1-201ENST00000287766 VPS16Q9H269 839 aa14.2□□□□□ -0.14
SLC6A1-201ENST00000287766 GSTTP1A0A1W2PQM5 241 aa14.2□□□□□ -0.14
SLC6A1-201ENST00000287766 F8W031 263 aaPredicted RBP14.2□□□□□ -0.14
SLC6A1-201ENST00000287766 C6orf229H3BNL8 230 aa14.2□□□□□ -0.14
SLC6A1-201ENST00000287766 STAT6P42226 847 aa14.2□□□□□ -0.14
SLC6A1-201ENST00000287766 LONRF3Q496Y0 759 aa14.2□□□□□ -0.14
SLC6A1-201ENST00000287766 NBPF11Q86T75 865 aa14.2□□□□□ -0.14
SLC6A1-201ENST00000287766 TFCP2L1Q9NZI6 479 aa14.2□□□□□ -0.14
SLC6A1-201ENST00000287766 NAA30Q147X3 362 aaPredicted RBP14.19□□□□□ -0.14
SLC6A1-201ENST00000287766 ZNF219Q9P2Y4 722 aaPredicted RBP14.19□□□□□ -0.14
SLC6A1-201ENST00000287766 CARMIL3Q8ND23 1372 aa14.19□□□□□ -0.14
SLC6A1-201ENST00000287766 ERCC3P19447 782 aa14.19□□□□□ -0.14
SLC6A1-201ENST00000287766 TRMT1LQ7Z2T5 733 aaKnown RBP14.19□□□□□ -0.14
SLC6A1-201ENST00000287766 NGLY1Q96IV0 654 aa14.19□□□□□ -0.14
SLC6A1-201ENST00000287766 CCDC114Q96M63 670 aa14.19□□□□□ -0.14
SLC6A1-201ENST00000287766 SERTAD1Q9UHV2 236 aa14.19□□□□□ -0.14
SLC6A1-201ENST00000287766 HSF2BPO75031 334 aa14.19□□□□□ -0.14
SLC6A1-201ENST00000287766 PPP2R3AQ06190 1150 aa14.19□□□□□ -0.14
SLC6A1-201ENST00000287766 ERCC6LQ2NKX8 1250 aa14.19□□□□□ -0.14
SLC6A1-201ENST00000287766 TDRD7Q8NHU6 1098 aaKnown RBP14.19□□□□□ -0.14
SLC6A1-201ENST00000287766 FANCLQ9NW38 375 aa14.19□□□□□ -0.14
SLC6A1-201ENST00000287766 A0A0G2JLW4 131 aa14.18□□□□□ -0.14
SLC6A1-201ENST00000287766 KIF5BP33176 963 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms