RNA–Protein interactions for RNA: ENST00000286758.4

CXCL13-201, Transcript of C-X-C motif chemokine ligand 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL13, Length 1,203 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13-201ENST00000286758 MFSD4BQ5TF39 518 aa12.34□□□□□ -0.43
CXCL13-201ENST00000286758 KCNV2Q8TDN2 545 aa12.34□□□□□ -0.43
CXCL13-201ENST00000286758 CUL5Q93034 780 aa12.34□□□□□ -0.43
CXCL13-201ENST00000286758 FAM81BQ96LP2 452 aa12.34□□□□□ -0.43
CXCL13-201ENST00000286758 SCLT1Q96NL6 688 aa12.34□□□□□ -0.43
CXCL13-201ENST00000286758 EPAS1Q99814 870 aa12.34□□□□□ -0.43
CXCL13-201ENST00000286758 CD248Q9HCU0 757 aa12.34□□□□□ -0.43
CXCL13-201ENST00000286758 DDX20Q9UHI6 824 aaKnown RBP12.34□□□□□ -0.43
CXCL13-201ENST00000286758 A0A0G2JS52 829 aa12.33□□□□□ -0.44
CXCL13-201ENST00000286758 NPHP1O15259 732 aa12.33□□□□□ -0.44
CXCL13-201ENST00000286758 EIF3HO15372 352 aaKnown RBP eCLIP12.33□□□□□ -0.44
CXCL13-201ENST00000286758 GADD45BO75293 160 aaPredicted RBP12.33□□□□□ -0.44
CXCL13-201ENST00000286758 FCHSD2O94868 740 aa12.33□□□□□ -0.44
CXCL13-201ENST00000286758 VIMP08670 466 aaKnown RBP12.33□□□□□ -0.44
CXCL13-201ENST00000286758 ZSCAN22P10073 491 aaPredicted RBP12.33□□□□□ -0.44
CXCL13-201ENST00000286758 RPL13P26373 211 aaKnown RBP12.33□□□□□ -0.44
CXCL13-201ENST00000286758 FLT3P36888 993 aa12.33□□□□□ -0.44
CXCL13-201ENST00000286758 CCT5P48643 541 aa12.33□□□□□ -0.44
CXCL13-201ENST00000286758 FOSBP53539 338 aa12.33□□□□□ -0.44
CXCL13-201ENST00000286758 GNL2Q13823 731 aaKnown RBP12.33□□□□□ -0.44
CXCL13-201ENST00000286758 KRT72Q14CN4 511 aa12.33□□□□□ -0.44
CXCL13-201ENST00000286758 USH1GQ495M9 461 aa12.33□□□□□ -0.44
CXCL13-201ENST00000286758 PPP1R15BQ5SWA1 713 aa12.33□□□□□ -0.44
CXCL13-201ENST00000286758 SFMBT2Q5VUG0 894 aa12.33□□□□□ -0.44
CXCL13-201ENST00000286758 GET4Q7L5D6 327 aaPredicted RBP12.33□□□□□ -0.44
CXCL13-201ENST00000286758 CARD6Q9BX69 1037 aa12.33□□□□□ -0.44
CXCL13-201ENST00000286758 EBF2Q9HAK2 575 aa12.33□□□□□ -0.44
CXCL13-201ENST00000286758 FAM135BQ49AJ0 1406 aa12.33□□□□□ -0.44
CXCL13-201ENST00000286758 ADGRL3Q9HAR2 1447 aa12.33□□□□□ -0.44
CXCL13-201ENST00000286758 EVC2Q86UK5 1308 aa12.33□□□□□ -0.44
CXCL13-201ENST00000286758 NUP160Q12769 1436 aa12.32□□□□□ -0.44
CXCL13-201ENST00000286758 USP27XA6NNY8 438 aa12.32□□□□□ -0.44
CXCL13-201ENST00000286758 MGRN1O60291 552 aa12.32□□□□□ -0.44
CXCL13-201ENST00000286758 RNF8O76064 485 aa12.32□□□□□ -0.44
CXCL13-201ENST00000286758 URI1O94763 535 aaPredicted RBP12.32□□□□□ -0.44
CXCL13-201ENST00000286758 SFPQP23246 707 aaKnown RBP eCLIP12.32□□□□□ -0.44
CXCL13-201ENST00000286758 Q4G0T1 1027 aa12.32□□□□□ -0.44
CXCL13-201ENST00000286758 GIMAP6Q6P9H5 292 aa12.32□□□□□ -0.44
CXCL13-201ENST00000286758 ANKRD13BQ86YJ7 626 aa12.32□□□□□ -0.44
CXCL13-201ENST00000286758 RUBCNQ92622 972 aa12.32□□□□□ -0.44
CXCL13-201ENST00000286758 PPP2R3CQ969Q6 453 aa12.32□□□□□ -0.44
CXCL13-201ENST00000286758 ZBED2Q9BTP6 218 aa12.32□□□□□ -0.44
CXCL13-201ENST00000286758 ZWILCHQ9H900 591 aa12.32□□□□□ -0.44
CXCL13-201ENST00000286758 DDX25Q9UHL0 483 aaKnown RBP12.32□□□□□ -0.44
CXCL13-201ENST00000286758 DAAM1Q9Y4D1 1078 aa12.32□□□□□ -0.44
CXCL13-201ENST00000286758 MRFAP1Q9Y605 127 aa12.32□□□□□ -0.44
CXCL13-201ENST00000286758 MED14O60244 1454 aa12.32□□□□□ -0.44
CXCL13-201ENST00000286758 ABCC11Q96J66 1382 aa12.31□□□□□ -0.44
CXCL13-201ENST00000286758 MADDQ8WXG6 1647 aa12.31□□□□□ -0.44
CXCL13-201ENST00000286758 ST20-MTHFSA0A0A6YYL1 179 aa12.31□□□□□ -0.44
CXCL13-201ENST00000286758 GOLGA6L4A6NEF3 574 aa12.31□□□□□ -0.44
CXCL13-201ENST00000286758 MYO1BO43795 1136 aa12.31□□□□□ -0.44
CXCL13-201ENST00000286758 RNF40O75150 1001 aa12.31□□□□□ -0.44
CXCL13-201ENST00000286758 KRT38O76015 456 aa12.31□□□□□ -0.44
CXCL13-201ENST00000286758 ZNF165P49910 485 aa12.31□□□□□ -0.44
CXCL13-201ENST00000286758 RIPK1Q13546 671 aa12.31□□□□□ -0.44
CXCL13-201ENST00000286758 RSPH3Q86UC2 560 aa12.31□□□□□ -0.44
CXCL13-201ENST00000286758 ACSBG1Q96GR2 724 aa12.31□□□□□ -0.44
CXCL13-201ENST00000286758 IWS1Q96ST2 819 aa12.31□□□□□ -0.44
CXCL13-201ENST00000286758 MAK16Q9BXY0 300 aaKnown RBP12.31□□□□□ -0.44
CXCL13-201ENST00000286758 BHMT2Q9H2M3 363 aa12.31□□□□□ -0.44
CXCL13-201ENST00000286758 TNMDQ9H2S6 317 aa12.31□□□□□ -0.44
CXCL13-201ENST00000286758 DNAAF2Q9NVR5 837 aaKnown RBP12.31□□□□□ -0.44
CXCL13-201ENST00000286758 QPCTLQ9NXS2 382 aa12.31□□□□□ -0.44
CXCL13-201ENST00000286758 TMED5Q9Y3A6 229 aa12.31□□□□□ -0.44
CXCL13-201ENST00000286758 PARP3Q9Y6F1 533 aa12.31□□□□□ -0.44
CXCL13-201ENST00000286758 FANCAO15360 1455 aa12.31□□□□□ -0.44
CXCL13-201ENST00000286758 IQGAP2Q13576 1575 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 DNMT1P26358 1616 aaKnown RBP12.3□□□□□ -0.44
CXCL13-201ENST00000286758 RASSF10A6NK89 507 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 B4DLN1 442 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 GOLGA8KD6RF30 607 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 PRC1O43663 620 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 NPTXRO95502 500 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 CCDC166P0CW27 439 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 PSMC4P43686 418 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 ZBED6P86452 979 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 AKAP17AQ02040 695 aaKnown RBP12.3□□□□□ -0.44
CXCL13-201ENST00000286758 BLMHQ13867 455 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 CASP8Q14790 479 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 ENOX2Q16206 610 aaKnown RBP12.3□□□□□ -0.44
CXCL13-201ENST00000286758 CLPPQ16740 277 aaPredicted RBP12.3□□□□□ -0.44
CXCL13-201ENST00000286758 CMPK2Q5EBM0 449 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 E4F1Q66K89 784 aaPredicted RBP12.3□□□□□ -0.44
CXCL13-201ENST00000286758 WDR93Q6P2C0 686 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 SRGAP1Q7Z6B7 1085 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 CEP57Q86XR8 500 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 CCDC65Q8IXS2 484 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 SMARCC2Q8TAQ2 1214 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 WDR66Q8TBY9 1149 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 TRAIPQ9BWF2 469 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 RABEP2Q9H5N1 569 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 SLC39A2Q9NP94 309 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 NRBP1Q9UHY1 535 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 PAIP2BQ9ULR5 123 aaKnown RBP12.3□□□□□ -0.44
CXCL13-201ENST00000286758 PHF24Q9UPV7 400 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 SH3TC1Q8TE82 1336 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 CDHR2Q9BYE9 1310 aa12.3□□□□□ -0.44
CXCL13-201ENST00000286758 ADGBQ8N7X0 1667 aa12.29□□□□□ -0.44
CXCL13-201ENST00000286758 PZPP20742 1482 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms