RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 PRR5LQ6MZQ0 368 aa21.29■■□□□ 1
PDLIM3-201ENST00000284767 CFAP45Q9UL16 551 aa21.29■■□□□ 1
PDLIM3-201ENST00000284767 SMIM22K7EJ46 135 aa21.28■■□□□ 1
PDLIM3-201ENST00000284767 SARM1Q6SZW1 724 aa21.28■■□□□ 1
PDLIM3-201ENST00000284767 SMARCC2Q8TAQ2 1214 aa21.28■■□□□ 1
PDLIM3-201ENST00000284767 NAPBQ9H115 298 aa21.28■■□□□ 1
PDLIM3-201ENST00000284767 DNAJC25Q9H1X3 360 aa21.28■■□□□ 1
PDLIM3-201ENST00000284767 SENP2Q9HC62 589 aa21.28■■□□□ 1
PDLIM3-201ENST00000284767 SLC4A4Q9Y6R1 1079 aa21.28■■□□□ 1
PDLIM3-201ENST00000284767 ZNF384Q8TF68 577 aa21.28■■□□□ 1
PDLIM3-201ENST00000284767 SDR42E1Q8WUS8 393 aa21.28■■□□□ 1
PDLIM3-201ENST00000284767 GNL3LQ9NVN8 582 aaKnown RBP21.28■■□□□ 1
PDLIM3-201ENST00000284767 UBR3Q6ZT12 1888 aa21.28■■□□□ 1
PDLIM3-201ENST00000284767 KLF18A0A0U1RQI7 1052 aa21.27■■□□□ 1
PDLIM3-201ENST00000284767 NEMFO60524 1076 aa21.27■■□□□ 1
PDLIM3-201ENST00000284767 KIF20AO95235 890 aa21.27■■□□□ 1
PDLIM3-201ENST00000284767 U2AF2P26368 475 aaKnown RBP eCLIP21.27■■□□□ 1
PDLIM3-201ENST00000284767 FBXO33Q7Z6M2 555 aa21.27■□□□□ 0.99
PDLIM3-201ENST00000284767 GPR101Q96P66 508 aaPredicted RBP21.27■□□□□ 0.99
PDLIM3-201ENST00000284767 ZHX1Q9UKY1 873 aaPredicted RBP21.27■□□□□ 0.99
PDLIM3-201ENST00000284767 CTAGE5O15320 804 aa21.26■□□□□ 0.99
PDLIM3-201ENST00000284767 ZNF274Q96GC6 653 aaPredicted RBP21.26■□□□□ 0.99
PDLIM3-201ENST00000284767 TRDNQ13061 729 aa21.26■□□□□ 0.99
PDLIM3-201ENST00000284767 CACTINQ8WUQ7 758 aaKnown RBP21.26■□□□□ 0.99
PDLIM3-201ENST00000284767 MYH15Q9Y2K3 1946 aa21.25■□□□□ 0.99
PDLIM3-201ENST00000284767 SPDYE4A6NLX3 237 aa21.25■□□□□ 0.99
PDLIM3-201ENST00000284767 RXRAP19793 462 aa21.25■□□□□ 0.99
PDLIM3-201ENST00000284767 DYNLL1P63167 89 aaKnown RBP21.25■□□□□ 0.99
PDLIM3-201ENST00000284767 TXNRD1Q16881 649 aa21.25■□□□□ 0.99
PDLIM3-201ENST00000284767 CCDC112Q8NEF3 446 aa21.25■□□□□ 0.99
PDLIM3-201ENST00000284767 MRFAP1L1Q96HT8 127 aa21.25■□□□□ 0.99
PDLIM3-201ENST00000284767 OGFRQ9NZT2 677 aa21.25■□□□□ 0.99
PDLIM3-201ENST00000284767 HPS5Q9UPZ3 1129 aa21.25■□□□□ 0.99
PDLIM3-201ENST00000284767 GOLGA8BA8MQT2 603 aa21.25■□□□□ 0.99
PDLIM3-201ENST00000284767 GOLGA6L19H0YKK7 550 aa21.25■□□□□ 0.99
PDLIM3-201ENST00000284767 H3BQV1 296 aa21.25■□□□□ 0.99
PDLIM3-201ENST00000284767 TDO2P48775 406 aa21.25■□□□□ 0.99
PDLIM3-201ENST00000284767 GUCY1B3Q02153 619 aa21.25■□□□□ 0.99
PDLIM3-201ENST00000284767 TPD52L1Q16890 204 aaPredicted RBP21.25■□□□□ 0.99
PDLIM3-201ENST00000284767 IFFO2Q5TF58 517 aa21.25■□□□□ 0.99
PDLIM3-201ENST00000284767 CGNQ9P2M7 1197 aaKnown RBP21.25■□□□□ 0.99
PDLIM3-201ENST00000284767 ADRA2BP18089 450 aa21.24■□□□□ 0.99
PDLIM3-201ENST00000284767 HIBADHP31937 336 aaKnown RBP21.24■□□□□ 0.99
PDLIM3-201ENST00000284767 IQCB1Q15051 598 aa21.24■□□□□ 0.99
PDLIM3-201ENST00000284767 ANKIB1Q9P2G1 1089 aa21.24■□□□□ 0.99
PDLIM3-201ENST00000284767 SERPINB2P05120 415 aa21.24■□□□□ 0.99
PDLIM3-201ENST00000284767 EVCP57679 992 aa21.23■□□□□ 0.99
PDLIM3-201ENST00000284767 ALX1Q15699 326 aa21.23■□□□□ 0.99
PDLIM3-201ENST00000284767 CCDC144BQ3MJ40 725 aa21.23■□□□□ 0.99
PDLIM3-201ENST00000284767 CCDC144CPQ8IYA2 1237 aa21.23■□□□□ 0.99
PDLIM3-201ENST00000284767 FBXL16Q8N461 479 aa21.23■□□□□ 0.99
PDLIM3-201ENST00000284767 LLPHQ9BRT6 129 aaKnown RBP21.23■□□□□ 0.99
PDLIM3-201ENST00000284767 ANKRD2Q9GZV1 360 aa21.23■□□□□ 0.99
PDLIM3-201ENST00000284767 FDPSP14324 419 aaKnown RBP21.23■□□□□ 0.99
PDLIM3-201ENST00000284767 RBM6P78332 1123 aaKnown RBP21.23■□□□□ 0.99
PDLIM3-201ENST00000284767 DDR1Q08345 913 aa21.23■□□□□ 0.99
PDLIM3-201ENST00000284767 STX1AQ16623 288 aa21.23■□□□□ 0.99
PDLIM3-201ENST00000284767 SLC27A3Q5K4L6 730 aa21.23■□□□□ 0.99
PDLIM3-201ENST00000284767 SALL1Q9NSC2 1324 aa21.23■□□□□ 0.99
PDLIM3-201ENST00000284767 CACNA1SQ13698 1873 aa21.22■□□□□ 0.99
PDLIM3-201ENST00000284767 PRDX5P30044 214 aa21.22■□□□□ 0.99
PDLIM3-201ENST00000284767 GRAPQ13588 217 aa21.22■□□□□ 0.99
PDLIM3-201ENST00000284767 RRP12Q5JTH9 1297 aaKnown RBP21.22■□□□□ 0.99
PDLIM3-201ENST00000284767 LRRC8AQ8IWT6 810 aa21.22■□□□□ 0.99
PDLIM3-201ENST00000284767 GRAPLQ8TC17 118 aaPredicted RBP21.22■□□□□ 0.99
PDLIM3-201ENST00000284767 PNPLA7Q6ZV29 1317 aa21.22■□□□□ 0.99
PDLIM3-201ENST00000284767 MAGEB6P1A0A0J9YX57 407 aa21.22■□□□□ 0.99
PDLIM3-201ENST00000284767 RIOK1Q9BRS2 568 aaKnown RBP21.22■□□□□ 0.99
PDLIM3-201ENST00000284767 CEP135Q66GS9 1140 aa21.21■□□□□ 0.99
PDLIM3-201ENST00000284767 OTUD7BQ6GQQ9 843 aa21.21■□□□□ 0.99
PDLIM3-201ENST00000284767 NAA16Q6N069 864 aaPredicted RBP21.21■□□□□ 0.99
PDLIM3-201ENST00000284767 ZKSCAN3Q9BRR0 538 aa21.21■□□□□ 0.99
PDLIM3-201ENST00000284767 MYL10Q9BUA6 226 aa21.21■□□□□ 0.99
PDLIM3-201ENST00000284767 TOMM22Q9NS69 142 aa21.21■□□□□ 0.99
PDLIM3-201ENST00000284767 ZSWIM5Q9P217 1185 aa21.21■□□□□ 0.99
PDLIM3-201ENST00000284767 TAOK2Q9UL54 1235 aa21.21■□□□□ 0.99
PDLIM3-201ENST00000284767 GJB4Q9NTQ9 266 aa21.21■□□□□ 0.99
PDLIM3-201ENST00000284767 CYP2D7A0A087X1C5 515 aa21.2■□□□□ 0.98
PDLIM3-201ENST00000284767 SH2B2O14492 632 aaPredicted RBP21.2■□□□□ 0.98
PDLIM3-201ENST00000284767 ZNF827Q17R98 1081 aa21.2■□□□□ 0.98
PDLIM3-201ENST00000284767 RCOR1Q9UKL0 485 aa21.2■□□□□ 0.98
PDLIM3-201ENST00000284767 ANGEL1Q9UNK9 670 aaKnown RBP21.2■□□□□ 0.98
PDLIM3-201ENST00000284767 IRS2Q9Y4H2 1338 aa21.2■□□□□ 0.98
PDLIM3-201ENST00000284767 MINDY4BA8MYZ0 360 aa21.2■□□□□ 0.98
PDLIM3-201ENST00000284767 MECOMQ03112 1051 aa21.2■□□□□ 0.98
PDLIM3-201ENST00000284767 EVX2Q03828 476 aa21.2■□□□□ 0.98
PDLIM3-201ENST00000284767 ATL3Q6DD88 541 aa21.2■□□□□ 0.98
PDLIM3-201ENST00000284767 AKNAD1Q5T1N1 836 aa21.19■□□□□ 0.98
PDLIM3-201ENST00000284767 RPGRQ92834 1020 aaKnown RBP21.19■□□□□ 0.98
PDLIM3-201ENST00000284767 NSUN4Q96CB9 384 aaKnown RBP21.19■□□□□ 0.98
PDLIM3-201ENST00000284767 NACAP1Q9BZK3 213 aa21.19■□□□□ 0.98
PDLIM3-201ENST00000284767 ADD1P35611 737 aaKnown RBP21.19■□□□□ 0.98
PDLIM3-201ENST00000284767 C11orf57Q6ZUT1 292 aaPredicted RBP21.19■□□□□ 0.98
PDLIM3-201ENST00000284767 IGDCC4Q8TDY8 1250 aa21.19■□□□□ 0.98
PDLIM3-201ENST00000284767 ZMYM6O95789 1325 aa21.18■□□□□ 0.98
PDLIM3-201ENST00000284767 GNAT2P19087 354 aa21.18■□□□□ 0.98
PDLIM3-201ENST00000284767 CEBPZQ03701 1054 aaKnown RBP21.18■□□□□ 0.98
PDLIM3-201ENST00000284767 MICU3Q86XE3 530 aa21.18■□□□□ 0.98
PDLIM3-201ENST00000284767 FTOQ9C0B1 505 aaKnown RBP eCLIP21.18■□□□□ 0.98
PDLIM3-201ENST00000284767 MFSD6Q6ZSS7 791 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms